MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 195179 bp
Accession: NZ_CP049321 Location: 1..195179 Organism: Caballeronia sp. SBC2 Replicon: plasmid pSBC2-5
Accession: NZ_CP049321 Location: 1..195179 Organism: Caballeronia sp. SBC2 Replicon: plasmid pSBC2-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBC2_RS40140 () | 394..1315 | + | 922 | Protein_1 | NAD-dependent deacetylase | - |
| SBC2_RS40145 () | 1397..1588 | + | 192 | WP_165107534.1 | hypothetical protein | - |
| SBC2_RS40150 () | 1600..1920 | + | 321 | WP_165107535.1 | hypothetical protein | - |
| SBC2_RS40155 () | 2261..2950 | + | 690 | WP_165107536.1 | hypothetical protein | - |
| SBC2_RS40160 () | 3011..4009 | + | 999 | WP_165107537.1 | hypothetical protein | - |
| SBC2_RS40165 () | 4025..4570 | + | 546 | WP_165107538.1 | hypothetical protein | - |
| SBC2_RS40170 () | 4567..5877 | - | 1311 | WP_165107539.1 | hypothetical protein | - |
| SBC2_RS40175 () | 5893..6528 | - | 636 | WP_165107540.1 | hypothetical protein | - |
| SBC2_RS40180 () | 6549..7451 | - | 903 | WP_165107541.1 | 5'-nucleotidase | - |
| SBC2_RS40185 () | 7529..10990 | - | 3462 | WP_165107543.1 | TM0106 family RecB-like putative nuclease | - |
| SBC2_RS40190 () | 11177..11464 | + | 288 | WP_165107546.1 | hypothetical protein | - |
| SBC2_RS40195 () | 11545..12192 | + | 648 | Protein_12 | ATP-binding protein | - |
| SBC2_RS40200 () | 12285..12509 | - | 225 | Protein_13 | ISKra4 family transposase ISBusp5 | Transposase |
| SBC2_RS40205 () | 12573..15887 | - | 3315 | WP_165107558.1 | cold shock domain-containing protein | - |
| SBC2_RS40210 () | 15899..18466 | - | 2568 | WP_165107884.1 | chromosome partitioning protein ParA | - |
| SBC2_RS40215 () | 18584..20584 | - | 2001 | WP_165107560.1 | hypothetical protein | - |
| SBC2_RS40220 () | 20548..24003 | - | 3456 | WP_165107562.1 | AAA family ATPase | - |
| SBC2_RS40225 () | 24000..25346 | - | 1347 | WP_165107564.1 | hypothetical protein | VF |
| SBC2_RS40230 () | 25339..26058 | - | 720 | WP_165107567.1 | protein phosphatase 2C domain-containing protein | - |
| SBC2_RS40235 () | 26055..26525 | - | 471 | WP_165107569.1 | VWA domain-containing protein | - |
| SBC2_RS40240 () | 26522..28315 | - | 1794 | WP_165107571.1 | DUF1887 family protein | - |
| SBC2_RS40245 () | 28312..30891 | - | 2580 | WP_165107885.1 | ESX secretion system protein EccC | VF |
| SBC2_RS40250 () | 31092..31322 | - | 231 | WP_165107573.1 | hypothetical protein | - |
| SBC2_RS40255 () | 31315..31656 | - | 342 | WP_165107575.1 | hypothetical protein | - |
| SBC2_RS40260 () | 31653..32963 | - | 1311 | WP_165107577.1 | hypothetical protein | - |
| SBC2_RS40265 () | 32980..33249 | - | 270 | WP_165107581.1 | WXG100 family type VII secretion target | - |
| SBC2_RS40270 () | 33249..33983 | - | 735 | WP_165107591.1 | VWA domain-containing protein | - |
| SBC2_RS40275 () | 35035..35181 | - | 147 | Protein_28 | IS1182 family transposase ISPmo1 | Transposase |
| SBC2_RS40280 () | 35320..35685 | - | 366 | WP_165107594.1 | hypothetical protein | - |
| SBC2_RS40285 () | 35792..36301 | - | 510 | WP_165107597.1 | hypothetical protein | - |
| SBC2_RS40290 () | 36325..37086 | + | 762 | WP_165107601.1 | hypothetical protein | - |
| SBC2_RS40295 () | 37963..39171 | + | 1209 | WP_165107604.1 | hypothetical protein | - |
| SBC2_RS40300 () | 39776..43492 | - | 3717 | WP_206366241.1 | patatin-like phospholipase family protein | - |
| SBC2_RS40305 () | 43734..44048 | + | 315 | WP_165107609.1 | hypothetical protein | - |
| SBC2_RS40310 () | 44707..45678 | + | 972 | WP_165107611.1 | hypothetical protein | - |
| SBC2_RS40315 () | 45675..46121 | + | 447 | WP_206366243.1 | hypothetical protein | - |
| SBC2_RS40320 () | 46470..47852 | + | 1383 | WP_165107616.1 | hypothetical protein | - |
| SBC2_RS40325 () | 48598..49884 | - | 1287 | WP_165107618.1 | hypothetical protein | - |
| SBC2_RS40330 () | 50324..52009 | - | 1686 | WP_165107620.1 | ATP-binding protein | - |
| SBC2_RS40335 () | 52001..52255 | + | 255 | WP_165107622.1 | hypothetical protein | - |
| SBC2_RS40340 () | 53248..53796 | + | 549 | WP_165107624.1 | hypothetical protein | - |
| SBC2_RS40345 () | 53920..54207 | - | 288 | WP_165107626.1 | putative addiction module antidote protein | Antitoxin Detail |
| SBC2_RS40350 () | 54208..54504 | - | 297 | WP_165107886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SBC2_RS40355 () | 54624..56657 | - | 2034 | WP_165107629.1 | ParB/RepB/Spo0J family partition protein | - |
| SBC2_RS40360 () | 56869..57291 | + | 423 | WP_165107631.1 | antirestriction protein | - |
| SBC2_RS40365 () | 57630..57914 | + | 285 | WP_165107634.1 | helix-turn-helix domain-containing protein | - |
| SBC2_RS40370 () | 57966..58928 | - | 963 | WP_165107636.1 | N-6 DNA methylase | - |
| SBC2_RS40375 () | 59451..60158 | + | 708 | WP_165107639.1 | translesion DNA synthesis-associated protein ImuA | - |
| SBC2_RS40380 () | 60349..60648 | - | 300 | WP_165107887.1 | DNA-binding protein Bv3F | VF |
| SBC2_RS40385 () | 61005..61370 | - | 366 | WP_165107641.1 | hypothetical protein | - |
| SBC2_RS40390 () | 63238..64371 | + | 1134 | WP_165107643.1 | hypothetical protein | - |
| SBC2_RS40395 () | 64374..68450 | + | 4077 | WP_165107644.1 | PD40 domain-containing protein | - |
| SBC2_RS40400 () | 68710..69132 | + | 423 | WP_165107646.1 | IS66 family transposase ISSgsp1 | Transposase |
| SBC2_RS40405 () | 69129..69476 | + | 348 | WP_062093208.1 | IS66 family transposase ISPre3 | Transposase |
| SBC2_RS40410 () | 69532..71076 | + | 1545 | WP_165107888.1 | IS66 family transposase ISPre3 | Transposase |
| SBC2_RS40415 () | 71089..71709 | + | 621 | WP_089163549.1 | plasmid pRiA4b ORF-3 family protein | - |
| SBC2_RS40420 () | 72171..72749 | + | 579 | WP_165107648.1 | hypothetical protein | - |
| SBC2_RS40425 () | 73449..74198 | - | 750 | WP_165107889.1 | hypothetical protein | - |
| SBC2_RS40430 () | 74312..77077 | - | 2766 | WP_165107650.1 | hypothetical protein | Relaxase |
| SBC2_RS40435 () | 77067..77444 | - | 378 | WP_089160520.1 | hypothetical protein | Relaxase |
| SBC2_RS40440 () | 77444..78001 | - | 558 | WP_165107652.1 | PH domain-containing protein | - |
| SBC2_RS40445 () | 78054..78659 | - | 606 | WP_165107654.1 | Phospholipase D | VF |
| SBC2_RS40450 () | 78734..79162 | - | 429 | WP_165107655.1 | single-stranded DNA-binding protein | - |
| SBC2_RS40455 () | 79198..79638 | - | 441 | WP_165107657.1 | hypothetical protein | - |
| SBC2_RS40460 () | 79643..80356 | - | 714 | WP_089160515.1 | hypothetical protein | - |
| SBC2_RS40465 () | 80353..80781 | - | 429 | WP_165107659.1 | hypothetical protein | - |
| SBC2_RS40470 () | 80793..82823 | - | 2031 | WP_165107661.1 | hypothetical protein | - |
| SBC2_RS40475 () | 82816..84771 | - | 1956 | WP_165107890.1 | Protein VirD4 | VF |
| SBC2_RS40480 () | 84870..85337 | - | 468 | WP_165107663.1 | hypothetical protein | - |
| SBC2_RS40485 () | 85334..86452 | - | 1119 | WP_165107665.1 | Type IV secretion system protein VirB11 | VF |
| SBC2_RS40490 () | 86433..87641 | - | 1209 | WP_165107667.1 | Type IV secretion system protein virB10 | VF |
| SBC2_RS40495 () | 87638..88468 | - | 831 | WP_165107669.1 | Type IV secretion system protein virB9 | VF |
| SBC2_RS40500 () | 88465..89274 | - | 810 | WP_165107671.1 | Type IV secretion system protein virB8 | VF |
| SBC2_RS40505 () | 89467..89778 | - | 312 | WP_165107673.1 | hypothetical protein | - |
| SBC2_RS40510 () | 89848..90795 | - | 948 | WP_165107675.1 | type IV secretion system protein | - |
| SBC2_RS40515 () | 90832..91524 | - | 693 | WP_165107892.1 | Type IV secretion system protein virB5 | VF |
| SBC2_RS40520 () | 91580..91927 | - | 348 | WP_165107677.1 | hypothetical protein | - |
| SBC2_RS40525 () | 92013..94388 | - | 2376 | WP_165107679.1 | Type IV secretion system protein virB4 | VF |
| SBC2_RS40530 () | 94385..94807 | - | 423 | WP_165107681.1 | hypothetical protein | VF |
| SBC2_RS40535 () | 94804..95070 | - | 267 | WP_165107894.1 | hypothetical protein | - |
| SBC2_RS40540 () | 95291..95473 | - | 183 | WP_165107683.1 | hypothetical protein | - |
| SBC2_RS40545 () | 95499..96263 | - | 765 | WP_165107685.1 | Type IV secretion system protein virB1 | VF |
| SBC2_RS40550 () | 96523..96825 | - | 303 | WP_165107689.1 | hypothetical protein | - |
| SBC2_RS40555 () | 96825..98933 | - | 2109 | WP_165107692.1 | DNA topoisomerase | - |
| SBC2_RS40560 () | 98945..99163 | - | 219 | WP_165107527.1 | hypothetical protein | - |
| SBC2_RS40565 () | 99236..99862 | - | 627 | WP_165107695.1 | hypothetical protein | - |
| SBC2_RS40570 () | 99944..100165 | - | 222 | WP_089160498.1 | hypothetical protein | - |
| SBC2_RS40575 () | 100255..100653 | + | 399 | WP_165107899.1 | helix-turn-helix domain-containing protein | - |
| SBC2_RS40580 () | 100659..101447 | - | 789 | WP_165107896.1 | 5-oxoprolinase subunit PxpA | - |
| SBC2_RS40585 () | 101548..102618 | - | 1071 | WP_165107700.1 | TRAP transporter substrate-binding protein DctP | - |
| SBC2_RS40590 () | 102786..103844 | - | 1059 | WP_165107703.1 | autoinducer binding domain-containing protein | - |
| SBC2_RS40595 () | 103849..106122 | - | 2274 | WP_165107705.1 | putative signaling protein | VF |
| SBC2_RS40600 () | 106940..107932 | + | 993 | WP_165107723.1 | hypothetical protein | - |
| SBC2_RS40605 () | 107964..109673 | + | 1710 | WP_165107725.1 | hypothetical protein | - |
| SBC2_RS40610 () | 109800..110288 | - | 489 | WP_165107727.1 | DoxX family protein | - |
| SBC2_RS40615 () | 110671..112170 | + | 1500 | WP_165107729.1 | IS21 family transposase ISCARN49 | Transposase |
| SBC2_RS40620 () | 112167..112985 | + | 819 | WP_062172269.1 | IS21 family transposase ISRel5 | Transposase |
| SBC2_RS40625 () | 113120..114628 | + | 1509 | WP_165105819.1 | ISNCY family transposase ISBj12 | Transposase |
| SBC2_RS40630 () | 115469..116800 | + | 1332 | WP_165107732.1 | hypothetical protein | - |
| SBC2_RS40635 () | 116914..117600 | + | 687 | WP_165107734.1 | hypothetical protein | - |
| SBC2_RS40640 () | 118482..118925 | + | 444 | Protein_101 | hypothetical protein | - |
| SBC2_RS40645 () | 119156..119305 | - | 150 | WP_165107736.1 | hypothetical protein | - |
| SBC2_RS40650 () | 119362..120048 | - | 687 | WP_165107901.1 | NUDIX domain-containing protein | - |
| SBC2_RS40655 () | 121685..122026 | - | 342 | WP_165107738.1 | hypothetical protein | - |
| SBC2_RS40660 () | 122166..122786 | + | 621 | WP_165107740.1 | hypothetical protein | - |
| SBC2_RS40665 () | 122783..123379 | + | 597 | WP_165107742.1 | hypothetical protein | - |
| SBC2_RS40670 () | 123708..124022 | - | 315 | WP_165107744.1 | hypothetical protein | - |
| SBC2_RS40675 () | 124019..124465 | - | 447 | WP_165107747.1 | helix-turn-helix domain-containing protein | - |
| SBC2_RS40680 () | 124478..124834 | - | 357 | WP_165107750.1 | hypothetical protein | - |
| SBC2_RS40685 () | 125255..126442 | + | 1188 | WP_165107753.1 | hypothetical protein | VF |
| SBC2_RS40690 () | 126445..127419 | + | 975 | WP_165107756.1 | ParB N-terminal domain-containing protein | - |
| SBC2_RS40695 () | 127766..129022 | + | 1257 | WP_206366233.1 | Replication protein O | - |
| SBC2_RS40700 () | 130063..132030 | + | 1968 | WP_165107903.1 | Tn3 family transposase TnBth1 | Transposase |
| SBC2_RS40705 () | 132175..132450 | + | 276 | WP_165107759.1 | HU family DNA-binding protein | - |
| SBC2_RS40710 () | 132563..132787 | - | 225 | WP_165107529.1 | hypothetical protein | - |
| SBC2_RS40715 () | 132787..133179 | - | 393 | WP_165107762.1 | hypothetical protein | - |
| SBC2_RS40725 () | 133664..134428 | + | 765 | WP_165107906.1 | ParA family protein | - |
| SBC2_RS40730 () | 134991..136913 | + | 1923 | WP_165107765.1 | KUP/HAK/KT family potassium transporter | - |
| SBC2_RS41930 () | 137412..137516 | + | 105 | WP_206366234.1 | potassium ABC transporter ATPase | - |
| SBC2_RS40735 () | 137766..139016 | - | 1251 | WP_165107769.1 | sodium:proton antiporter | - |
| SBC2_RS40740 () | 139840..139935 | + | 96 | WP_035566418.1 | potassium-transporting ATPase subunit F | - |
| SBC2_RS40745 () | 139932..141740 | + | 1809 | WP_165107776.1 | potassium-transporting ATPase subunit KdpA | - |
| SBC2_RS40750 () | 141765..143918 | + | 2154 | WP_165107777.1 | potassium-transporting ATPase subunit KdpB | - |
| SBC2_RS40755 () | 144008..144589 | + | 582 | WP_165107778.1 | potassium-transporting ATPase subunit KdpC | - |
| SBC2_RS40760 () | 144589..147381 | + | 2793 | WP_165107779.1 | sensor histidine kinase KdpD | - |
| SBC2_RS40765 () | 147378..148076 | + | 699 | WP_165107780.1 | KDP operon transcriptional regulatory protein KdpE | VF |
| SBC2_RS40770 () | 148912..149328 | + | 417 | WP_165107781.1 | universal stress protein | - |
| SBC2_RS40775 () | 150066..150269 | + | 204 | WP_165107783.1 | cold-shock protein | - |
| SBC2_RS40780 () | 150840..151085 | + | 246 | Protein_129 | ISL3 family transposase ISAe1 | Transposase |
| SBC2_RS41935 () | 151082..151231 | + | 150 | WP_206366246.1 | hypothetical protein | - |
| SBC2_RS40785 () | 152029..152817 | + | 789 | WP_165107785.1 | alpha/beta fold hydrolase | - |
| SBC2_RS40790 () | 153040..153621 | + | 582 | WP_165107787.1 | carboxymuconolactone decarboxylase family protein | - |
| SBC2_RS40795 () | 153838..154287 | + | 450 | WP_165107789.1 | RidA family protein | - |
| SBC2_RS40800 () | 154486..155445 | + | 960 | WP_165107791.1 | hypothetical protein | - |
| SBC2_RS40805 () | 155509..155964 | + | 456 | Protein_135 | ISKra4 family transposase ISBusp5 | Transposase |
| SBC2_RS40810 () | 156070..157116 | + | 1047 | WP_165107793.1 | IS21 family transposase ISRso6 | Transposase |
| SBC2_RS40815 () | 157113..157952 | + | 840 | WP_007183032.1 | IS21 family transposase ISRso6 | Transposase |
| SBC2_RS40820 () | 158028..159017 | + | 990 | Protein_138 | ISKra4 family transposase ISBusp5 | Transposase |
| SBC2_RS40825 () | 159221..160945 | - | 1725 | WP_165107795.1 | DUF2357 domain-containing protein | - |
| SBC2_RS40830 () | 160945..162411 | - | 1467 | WP_165107819.1 | AAA family ATPase | - |
| SBC2_RS40835 () | 162408..163808 | - | 1401 | WP_165107822.1 | DNA cytosine methyltransferase | - |
| SBC2_RS40840 () | 163930..164232 | + | 303 | WP_165107824.1 | hypothetical protein | - |
| SBC2_RS40845 () | 164269..164691 | - | 423 | WP_165107826.1 | DNA mismatch endonuclease Vsr | - |
| SBC2_RS40850 () | 165165..166181 | + | 1017 | WP_165107828.1 | IS5 family transposase ISBmu2 | Transposase |
| SBC2_RS40855 () | 166442..166696 | + | 255 | WP_165107908.1 | hypothetical protein | - |
| SBC2_RS40860 () | 166882..167343 | + | 462 | Protein_146 | IS110 family transposase ISWpi13 | Transposase |
| SBC2_RS40865 () | 167632..168639 | + | 1008 | WP_165107830.1 | hypothetical protein | - |
| SBC2_RS40870 () | 168860..169018 | - | 159 | WP_165107832.1 | hypothetical protein | - |
| SBC2_RS40875 () | 169808..170266 | - | 459 | WP_165107910.1 | putative molybdenum carrier protein | - |
| SBC2_RS40880 () | 170412..171248 | - | 837 | WP_165107834.1 | NAD-dependent deacetylase | - |
| SBC2_RS40885 () | 171433..172492 | + | 1060 | Protein_151 | WYL domain-containing protein | - |
| SBC2_RS40890 () | 172568..173377 | + | 810 | WP_165107835.1 | hypothetical protein | - |
| SBC2_RS40895 () | 173455..173694 | + | 240 | WP_165107912.1 | hypothetical protein | - |
| SBC2_RS40900 () | 173784..174317 | - | 534 | WP_165107838.1 | hypothetical protein | - |
| SBC2_RS40905 () | 174687..175013 | + | 327 | WP_206366237.1 | hypothetical protein | - |
| SBC2_RS40910 () | 175595..175807 | - | 213 | WP_165107843.1 | hypothetical protein | - |
| SBC2_RS40915 () | 175906..176484 | - | 579 | WP_165107845.1 | hypothetical protein | - |
| SBC2_RS40920 () | 176798..177169 | - | 372 | WP_165107847.1 | hypothetical protein | - |
| SBC2_RS40930 () | 178346..180010 | - | 1665 | WP_165107851.1 | PD-(D/E)XK nuclease family protein | - |
| SBC2_RS40935 () | 181091..182314 | + | 1224 | WP_165086648.1 | IS110 family transposase ISAzo28 | Transposase |
| SBC2_RS40940 () | 182338..183569 | + | 1232 | WP_165107853.1 | IS3 family transposase IS1416 | Transposase |
| SBC2_RS40945 () | 184894..185139 | + | 246 | Protein_162 | ISL3 family transposase ISAe1 | Transposase |
| SBC2_RS41940 () | 185136..185285 | + | 150 | WP_206366246.1 | hypothetical protein | - |
| SBC2_RS40950 () | 186221..186412 | - | 192 | WP_165107855.1 | hypothetical protein | - |
| SBC2_RS40955 () | 186415..186801 | - | 387 | WP_165107857.1 | hypothetical protein | - |
| SBC2_RS40960 () | 187121..187678 | + | 558 | WP_165107860.1 | hypothetical protein | - |
| SBC2_RS40965 () | 188000..189523 | + | 1524 | WP_165107863.1 | IS21 family transposase ISCARN16 | Transposase |
| SBC2_RS40970 () | 189516..190316 | + | 801 | WP_165107867.1 | IS21 family transposase ISCARN16 | Transposase |
| SBC2_RS40975 () | 190720..191532 | - | 813 | WP_206366239.1 | hypothetical protein | - |
| SBC2_RS40980 () | 191830..192036 | - | 207 | WP_165107873.1 | hypothetical protein | - |
| SBC2_RS40985 () | 192159..192368 | - | 210 | WP_165107914.1 | hypothetical protein | - |
| SBC2_RS40990 () | 192612..193010 | - | 399 | WP_165107877.1 | hypothetical protein | - |
| SBC2_RS40995 () | 193152..194069 | - | 918 | WP_165107880.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|