MGE detailed information
MGE type: IScluster/Tn MGE length: 19643 bp
Accession: NZ_CP049285 Location: 1835053..1854695 Organism: Shigella boydii strain 602068 Replicon: chromosome
Accession: NZ_CP049285 Location: 1835053..1854695 Organism: Shigella boydii strain 602068 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S54_RS09235 () | 1830287..1830928 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G5S54_RS09240 () | 1830984..1832162 | - | 1179 | WP_000173497.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G5S54_RS09245 () | 1832296..1832590 | + | 295 | Protein_1793 | DNA damage-inducible protein YebG | - |
| G5S54_RS09250 () | 1832657..1833013 | + | 357 | WP_001295500.1 | protein YebF | - |
| G5S54_RS09255 () | 1833340..1833999 | + | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| G5S54_RS09260 () | 1834208..1835194 | + | 987 | Protein_1796 | oligopeptidase B | - |
| G5S54_RS09265 () | 1835239..1836392 | - | 1154 | Protein_1797 | IS3 family transposase ISSd1 | Transposase |
| G5S54_RS09270 () | 1836491..1837498 | + | 1008 | Protein_1798 | prolyl oligopeptidase family serine peptidase | - |
| G5S54_RS09275 () | 1837524..1838737 | + | 1214 | WP_134810244.1 | IS3 family transposase IS629 | Transposase |
| G5S54_RS09280 () | 1838844..1839506 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| G5S54_RS09285 () | 1839530..1840186 | - | 657 | WP_000011642.1 | carbon-nitrogen hydrolase family protein | - |
| G5S54_RS09290 () | 1840288..1840518 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| G5S54_RS09295 () | 1840657..1841031 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| G5S54_RS09300 () | 1841035..1841902 | + | 868 | Protein_1804 | copper homeostasis membrane protein CopD | - |
| G5S54_RS09305 () | 1841915..1842256 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - () | 1842284..1842517 | - | 234 | - | - | Antitoxin Detail |
| - () | 1842413..1842516 | + | 104 | - | - | Toxin Detail |
| G5S54_RS09310 () | 1842638..1843165 | - | 528 | Protein_1806 | hypothetical protein ; Integrase | Integrase |
| G5S54_RS09320 () | 1844598..1845700 | + | 1103 | Protein_1808 | IS3 family transposase IS600 | Transposase |
| G5S54_RS09325 () | 1845799..1846248 | - | 450 | Protein_1809 | IS1 family transposase IS1X2 | Transposase |
| G5S54_RS09330 () | 1846295..1847887 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| G5S54_RS09335 () | 1847918..1848268 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| G5S54_RS09340 () | 1848265..1848684 | - | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| G5S54_RS09345 () | 1848770..1848877 | - | 108 | Protein_1813 | cell division inhibition protein DicB | - |
| G5S54_RS09350 () | 1848888..1849307 | - | 420 | WP_078163765.1 | hypothetical protein | - |
| G5S54_RS09355 () | 1850109..1850110 | - | 2 | WP_094096853.1 | IS3 family transposase ISSd1 | Transposase |
| G5S54_RS09360 () | 1850546..1850725 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| G5S54_RS09365 () | 1850726..1852441 | - | 1716 | WP_000026175.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| G5S54_RS09370 () | 1852762..1852878 | + | 117 | WP_000087865.1 | IS3 family transposase ISSd1 | Transposase |
| G5S54_RS09375 () | 1852912..1853609 | + | 698 | Protein_1819 | IS1 family transposase IS1X2 | Transposase |
| G5S54_RS09380 () | 1853626..1854695 | + | 1070 | Protein_1820 | IS3 family transposase IS600 | Transposase |
| G5S54_RS09385 () | 1855227..1855883 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| G5S54_RS09390 () | 1855884..1856075 | - | 192 | WP_000457842.1 | YebW family protein | - |
| G5S54_RS09395 () | 1856180..1856416 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| G5S54_RS09400 () | 1856534..1857973 | - | 1440 | WP_000057025.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|