MGE detailed information
MGE type: IScluster/Tn MGE length: 23618 bp
Accession: NZ_CP049282 Location: 180028..203645 Organism: Shigella boydii strain 600657 Replicon: plasmid p600657_208
Accession: NZ_CP049282 Location: 180028..203645 Organism: Shigella boydii strain 600657 Replicon: plasmid p600657_208
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S55_RS24680 () | 176086..179393 | + | 3308 | Protein_211 | outer membrane autotransporter IcsA | - |
| G5S55_RS24685 () | 179579..180002 | + | 424 | Protein_212 | fimbria/pilus outer membrane usher protein | - |
| G5S55_RS24690 () | 180028..181241 | + | 1214 | WP_171764110.1 | IS3 family transposase IS629 | Transposase |
| G5S55_RS24695 () | 181582..183234 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| G5S55_RS24700 () | 183245..183415 | - | 171 | Protein_215 | transposase | - |
| G5S55_RS24705 () | 183588..183985 | + | 398 | Protein_216 | IS1 family transposase IS1F | Transposase |
| G5S55_RS24710 () | 184078..184458 | + | 381 | WP_178930522.1 | IS66 family transposase ISEc8 | Transposase |
| G5S55_RS24715 () | 184455..184802 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| G5S55_RS24720 () | 184851..186389 | + | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| G5S55_RS24725 () | 186426..186734 | + | 309 | Protein_220 | IS1 family transposase IS1X2 | Transposase |
| G5S55_RS24730 () | 186774..186893 | - | 120 | Protein_221 | transposase domain-containing protein | - |
| G5S55_RS24735 () | 186967..187257 | - | 291 | Protein_222 | reverse transcriptase | - |
| G5S55_RS24740 () | 187329..187460 | + | 132 | Protein_223 | IS3 family transposase IS911 | Transposase |
| G5S55_RS24745 () | 187504..188717 | - | 1214 | Protein_224 | IS3 family transposase IS629 | Transposase |
| G5S55_RS24750 () | 188771..189810 | + | 1040 | Protein_225 | IS3 family transposase ISLad1 | Transposase |
| G5S55_RS24755 () | 190829..191788 | + | 960 | WP_000921951.1 | plasmid segregation protein ParM | - |
| G5S55_RS24760 () | 191788..192183 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| G5S55_RS24770 () | 193672..194037 | + | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| G5S55_RS24775 () | 194083..194927 | + | 845 | Protein_230 | IS5 family transposase ISSfl7 | Transposase |
| G5S55_RS24780 () | 195099..195848 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| G5S55_RS24785 () | 196211..196444 | + | 234 | Protein_232 | IS3 family transposase IS600 | Transposase |
| G5S55_RS24790 () | 196457..197149 | + | 693 | Protein_233 | group II intron reverse transcriptase/maturase | - |
| G5S55_RS24795 () | 197204..198417 | + | 1214 | WP_167692677.1 | IS3 family transposase IS629 | Transposase |
| G5S55_RS24800 () | 198493..198765 | - | 273 | WP_012421738.1 | hypothetical protein | - |
| G5S55_RS24805 () | 199358..199576 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| G5S55_RS24810 () | 199578..199883 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| G5S55_RS24815 () | 199919..200014 | + | 96 | Protein_238 | transposase domain-containing protein | - |
| G5S55_RS24820 () | 200276..201913 | + | 1638 | WP_012421769.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| G5S55_RS24825 () | 202121..202390 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| G5S55_RS24830 () | 202387..202613 | + | 227 | Protein_241 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G5S55_RS24835 () | 202642..203127 | + | 486 | WP_039058926.1 | Protein kinase OspG | VF |
| G5S55_RS24840 () | 203142..203839 | - | 698 | Protein_243 | IS1 family transposase IS1X2 | Transposase |
| G5S55_RS24845 () | 204046..204162 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| G5S55_RS24850 () | 204526..205368 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| G5S55_RS24855 () | 205371..206459 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| G5S55_RS24860 () | 206464..207414 | + | 951 | WP_012421771.1 | virulence factor VirK | - |
| G5S55_RS24865 () | 207479..208423 | + | 945 | WP_012421740.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|