MGE detailed information
MGE type: Genomic_island MGE length: 9466 bp
Accession: NZ_CP049281 Location: 2430867..2440332 Organism: Shigella boydii strain 600657 Replicon: chromosome
Accession: NZ_CP049281 Location: 2430867..2440332 Organism: Shigella boydii strain 600657 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S55_RS12730 () | 2426064..2428697 | + | 2634 | WP_024258614.1 | lipid-binding membrane homeostasis protein YebT | - |
| G5S55_RS12735 () | 2428777..2430216 | + | 1440 | WP_024258615.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G5S55_RS12740 () | 2430334..2430570 | + | 237 | WP_012421427.1 | DUF1480 family protein | - |
| G5S55_RS12745 () | 2430675..2430866 | + | 192 | WP_000457842.1 | YebW family protein | - |
| G5S55_RS12750 () | 2430867..2431331 | - | 465 | Protein_2480 | serine/threonine-protein phosphatase | - |
| G5S55_RS12755 () | 2431398..2431674 | + | 277 | Protein_2481 | IS3 family transposase ISSd1 | Transposase |
| G5S55_RS12760 () | 2431766..2432146 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| G5S55_RS12765 () | 2432143..2432490 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| G5S55_RS12770 () | 2432539..2434077 | + | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| G5S55_RS12775 () | 2434199..2434378 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| G5S55_RS12780 () | 2434379..2436094 | - | 1716 | WP_077128820.1 | hypothetical protein | VF |
| G5S55_RS12785 () | 2436633..2437330 | + | 698 | Protein_2487 | IS1 family transposase IS1X2 | Transposase |
| G5S55_RS12790 () | 2437613..2437810 | + | 198 | Protein_2488 | metallophosphoesterase | - |
| G5S55_RS12800 () | 2439071..2439598 | + | 528 | Protein_2490 | hypothetical protein ; Integrase | Integrase |
| - () | 2439729..2439963 | + | 235 | - | - | Antitoxin Detail |
| - () | 2439730..2439833 | - | 104 | - | - | Toxin Detail |
| G5S55_RS12805 () | 2439991..2440332 | - | 342 | WP_000976477.1 | YebY family protein | - |
| G5S55_RS12810 () | 2440345..2441217 | - | 873 | WP_000879299.1 | copper homeostasis membrane protein CopD | - |
| G5S55_RS12815 () | 2441221..2441595 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| G5S55_RS12820 () | 2441734..2441964 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| G5S55_RS12825 () | 2442066..2442722 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| G5S55_RS12830 () | 2442746..2443408 | + | 663 | WP_000944259.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|