MGE detailed information
MGE type: IScluster/Tn MGE length: 25143 bp
Accession: NZ_CP049279 Location: 48315..73457 Organism: Shigella boydii strain 600690 Replicon: plasmid p600690_216
Accession: NZ_CP049279 Location: 48315..73457 Organism: Shigella boydii strain 600690 Replicon: plasmid p600690_216
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS23875 (G5S56_23875) | 43855..44091 | + | 237 | WP_000588811.1 | phosphopantetheine-binding protein | - |
| G5S56_RS23880 (G5S56_23880) | 44308..45237 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| G5S56_RS23885 (G5S56_23885) | 46183..46962 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| G5S56_RS25505 | 47159..47968 | - | 810 | Protein_52 | IS110 family transposase | - |
| G5S56_RS23895 (G5S56_23895) | 48315..49319 | + | 1005 | WP_000255972.1 | IS21 family transposase IS100kyp | Transposase |
| G5S56_RS23900 (G5S56_23900) | 49511..50707 | + | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| G5S56_RS23905 (G5S56_23905) | 50757..51594 | - | 838 | Protein_55 | IS4 family transposase ISEc13 | Transposase |
| G5S56_RS23910 (G5S56_23910) | 51577..51918 | - | 342 | Protein_56 | IS4 family transposase ISEc13 | Transposase |
| G5S56_RS23915 (G5S56_23915) | 52033..52837 | - | 805 | Protein_57 | IS3 family transposase | - |
| G5S56_RS23925 (G5S56_23925) | 54372..55826 | - | 1455 | WP_000701114.1 | hypothetical protein | VF |
| G5S56_RS23930 (G5S56_23930) | 56195..56869 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS23935 (G5S56_23935) | 56866..57213 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS23940 (G5S56_23940) | 57233..57931 | + | 699 | Protein_62 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS23945 (G5S56_23945) | 57996..59152 | + | 1157 | WP_086020934.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS23950 (G5S56_23950) | 59194..59805 | + | 612 | Protein_64 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS23955 (G5S56_23955) | 60059..60223 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| G5S56_RS23960 (G5S56_23960) | 61125..61409 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| G5S56_RS23965 (G5S56_23965) | 61397..61882 | + | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| G5S56_RS23970 (G5S56_23970) | 62055..62387 | - | 333 | Protein_68 | IS4 family transposase ISSfl1 | Transposase |
| G5S56_RS23975 (G5S56_23975) | 62450..62602 | + | 153 | Protein_69 | IS3 family transposase IS600 | Transposase |
| G5S56_RS23980 (G5S56_23980) | 62667..63823 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS23990 (G5S56_23990) | 63867..64873 | + | 1007 | Protein_71 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS23995 (G5S56_23995) | 64912..65052 | - | 141 | Protein_72 | IS3 family transposase IS911 | Transposase |
| G5S56_RS24000 (G5S56_24000) | 65122..66309 | - | 1188 | WP_178966726.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| G5S56_RS24005 (G5S56_24005) | 66379..67506 | - | 1128 | WP_178966728.1 | transposase | - |
| G5S56_RS24010 (G5S56_24010) | 67487..67759 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| G5S56_RS24015 (G5S56_24015) | 67926..68045 | - | 120 | Protein_76 | IS66 family transposase ISCro1 | Transposase |
| G5S56_RS24020 (G5S56_24020) | 68162..69859 | - | 1698 | WP_078167441.1 | hypothetical protein | VF |
| G5S56_RS24025 (G5S56_24025) | 69935..70084 | + | 150 | Protein_78 | IS1 family transposase | - |
| G5S56_RS24030 (G5S56_24030) | 70188..71600 | - | 1413 | WP_001026854.1 | hypothetical protein | VF |
| G5S56_RS24035 (G5S56_24035) | 72051..72113 | + | 63 | Protein_80 | IS66 family transposase ISCro1 | Transposase |
| G5S56_RS24040 (G5S56_24040) | 72134..72355 | - | 222 | Protein_81 | IS66 family transposase ISCro1 | Transposase |
| G5S56_RS24045 (G5S56_24045) | 72498..72692 | - | 195 | Protein_82 | HNH endonuclease signature motif containing protein | - |
| G5S56_RS25510 | 72774..72905 | + | 132 | WP_000124105.1 | hypothetical protein | - |
| G5S56_RS24055 (G5S56_24055) | 73833..74095 | - | 263 | Protein_85 | recombinase family protein | - |
| G5S56_RS24060 (G5S56_24060) | 74247..74720 | - | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| G5S56_RS24065 (G5S56_24065) | 74739..75131 | - | 393 | Protein_87 | hypothetical protein | - |
| G5S56_RS24070 (G5S56_24070) | 75359..75997 | - | 639 | WP_000502855.1 | ParB N-terminal domain-containing protein | - |
| G5S56_RS24075 (G5S56_24075) | 75982..77208 | - | 1227 | WP_000017084.1 | phosphoadenosine phosphosulfate reductase | - |
| G5S56_RS24080 (G5S56_24080) | 77533..78285 | - | 753 | WP_000758117.1 | F4 (K88) fimbria minor subunit FaeI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|