MGE detailed information
MGE type: IScluster/Tn MGE length: 29951 bp
Accession: NZ_CP049278 Location: 2596324..2626274 Organism: Shigella boydii strain 600690 Replicon: chromosome
Accession: NZ_CP049278 Location: 2596324..2626274 Organism: Shigella boydii strain 600690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS12770 (2591816) | 2591816..2592511 | + | 696 | WP_078167299.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| G5S56_RS12775 (2592508) | 2592508..2593172 | + | 665 | Protein_2506 | respiratory nitrate reductase subunit gamma | - |
| G5S56_RS12780 (2593251) | 2593251..2594144 | + | 894 | WP_078167298.1 | PhzF family isomerase | - |
| G5S56_RS12785 (2594240) | 2594240..2595085 | - | 846 | WP_047624774.1 | N-hydroxyarylamine O-acetyltransferase | - |
| G5S56_RS12790 (2595257) | 2595257..2595826 | + | 570 | WP_000085896.1 | flavin reductase family protein | - |
| G5S56_RS12795 (2595830) | 2595830..2596057 | - | 228 | WP_001120145.1 | tautomerase PptA | - |
| G5S56_RS12800 (2596157) | 2596157..2596282 | - | 126 | Protein_2511 | ISAs1 family transposase | - |
| G5S56_RS12810 (2597547) | 2597547..2597651 | - | 105 | Protein_2513 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS12815 (2597814) | 2597814..2599042 | + | 1229 | WP_171764987.1 | IS3 family transposase IS2 | Transposase |
| G5S56_RS12820 (2599065) | 2599065..2599157 | + | 93 | Protein_2515 | type 1 fimbrial protein | - |
| G5S56_RS12825 (2599170) | 2599170..2599673 | + | 504 | WP_000825446.1 | hypothetical protein | VF |
| G5S56_RS12830 (2599733) | 2599733..2600548 | + | 816 | Protein_2517 | hypothetical protein | VF |
| G5S56_RS12835 (2600546) | 2600546..2601892 | - | 1347 | WP_000483770.1 | IS4 family transposase IS4 | Transposase |
| G5S56_RS12840 (2601954) | 2601954..2602085 | + | 132 | Protein_2519 | fimbrial protein | - |
| G5S56_RS12845 (2602419) | 2602419..2604698 | + | 2280 | WP_078167387.1 | acid resistance putative oxidoreductase YdeP | - |
| G5S56_RS12850 (2604946) | 2604946..2605143 | + | 198 | WP_000543393.1 | two-component system connector SafA | - |
| G5S56_RS12855 (2605218) | 2605218..2605979 | + | 762 | WP_000060459.1 | acid stress response transcriptional regulator YdeO | - |
| G5S56_RS12860 (2606381) | 2606381..2606791 | + | 411 | Protein_2523 | sulfatase-like hydrolase/transferase | - |
| G5S56_RS12865 (2606872) | 2606872..2608061 | + | 1190 | Protein_2524 | IS4 family transposase ISSfl1 | Transposase |
| G5S56_RS12870 (2608092) | 2608092..2609015 | + | 924 | Protein_2525 | IS4 family transposase ISSfl1 | Transposase |
| G5S56_RS12875 (2609081) | 2609081..2610237 | + | 1157 | WP_086020934.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS12880 (2610277) | 2610277..2610642 | + | 366 | Protein_2527 | sulfatase | - |
| G5S56_RS12885 (2610694) | 2610694..2611851 | + | 1158 | WP_078167417.1 | anaerobic sulfatase maturase | - |
| G5S56_RS12890 (2611817) | 2611817..2611939 | - | 123 | WP_120795387.1 | protein YneP | - |
| G5S56_RS12895 (2612142) | 2612142..2613826 | + | 1685 | Protein_2530 | ABC transporter ATP-binding protein/permease | - |
| G5S56_RS12900 (2613920) | 2613920..2615266 | + | 1347 | WP_000483770.1 | IS4 family transposase IS4 | Transposase |
| G5S56_RS12905 (2615303) | 2615303..2617675 | + | 2373 | WP_078167414.1 | TonB-dependent receptor plug domain-containing protein | - |
| G5S56_RS12910 (2617732) | 2617732..2618958 | + | 1227 | Protein_2533 | pitrilysin family protein | - |
| G5S56_RS12930 (2621084) | 2621084..2621905 | - | 822 | WP_078167389.1 | antitermination protein | - |
| G5S56_RS12935 (2621920) | 2621920..2622277 | - | 358 | Protein_2536 | RusA family crossover junction endodeoxyribonuclease | - |
| G5S56_RS12940 (2622290) | 2622290..2623333 | - | 1044 | WP_078167390.1 | DUF968 domain-containing protein | - |
| G5S56_RS12945 (2623335) | 2623335..2623613 | - | 279 | WP_024258459.1 | hypothetical protein | - |
| G5S56_RS12950 (2623680) | 2623680..2623931 | - | 252 | WP_000980987.1 | protein Rem | - |
| G5S56_RS12955 (2624149) | 2624149..2624304 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G5S56_RS12960 (2624376) | 2624376..2624663 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G5S56_RS12965 (2624663) | 2624663..2624902 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G5S56_RS25275 (2624927) | 2624927..2625052 | + | 126 | Protein_2543 | protein YdfV | - |
| G5S56_RS12970 (2625118) | 2625118..2626274 | + | 1157 | WP_178966658.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS12975 (2626319) | 2626319..2626633 | - | 315 | Protein_2545 | hypothetical protein | - |
| G5S56_RS12980 (2627419) | 2627419..2627631 | - | 213 | WP_000882238.1 | DUF5445 family protein | - |
| G5S56_RS25280 (2627707) | 2627707..2628324 | - | 618 | Protein_2547 | glutathione S-transferase family protein | - |
| G5S56_RS12990 (2628591) | 2628591..2630090 | + | 1500 | WP_001300590.1 | L-asparagine permease | - |
| G5S56_RS12995 (2630203) | 2630203..2631255 | - | 1053 | WP_078166753.1 | YncE family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|