MGE detailed information
MGE type: Genomic_island MGE length: 16152 bp
Accession: NZ_CP049278 Location: 1799490..1815641 Organism: Shigella boydii strain 600690 Replicon: chromosome
Accession: NZ_CP049278 Location: 1799490..1815641 Organism: Shigella boydii strain 600690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS08575 (1795817) | 1795817..1796732 | + | 916 | Protein_1677 | glycine betaine ABC transporter substrate-binding protein OsmF | - |
| G5S56_RS08580 (1796739) | 1796739..1797854 | + | 1116 | Protein_1678 | glycine betaine ABC transporter permease YehY | - |
| G5S56_RS08585 (1797847) | 1797847..1798773 | + | 927 | WP_000569361.1 | glycine betaine ABC transporter ATP binding protein YehX | - |
| G5S56_RS08590 (1798778) | 1798778..1799509 | + | 732 | WP_000783120.1 | glycine betaine ABC transporter permease YehW | - |
| G5S56_RS08595 (1799490) | 1799490..1799597 | - | 108 | WP_001216963.1 | protein YohO | - |
| G5S56_RS08600 (1799657) | 1799657..1800358 | - | 702 | WP_029208330.1 | HTH-type transcriptional regulator MlrA | - |
| G5S56_RS08605 (1800379) | 1800379..1801414 | - | 1036 | Protein_1683 | tyrosine-type recombinase/integrase | - |
| G5S56_RS08610 (1801439) | 1801439..1801621 | - | 183 | WP_134795662.1 | IS66 family transposase ISSfl3 | Transposase |
| G5S56_RS08615 (1801637) | 1801637..1802793 | + | 1157 | WP_134795588.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS08620 (1802885) | 1802885..1803472 | + | 588 | Protein_1686 | DNA replication protein | - |
| G5S56_RS08625 (1803462) | 1803462..1804934 | + | 1473 | WP_139286449.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| G5S56_RS08630 (1805011) | 1805011..1805451 | + | 441 | WP_000736913.1 | recombination protein NinB | - |
| G5S56_RS08635 (1805448) | 1805448..1805975 | + | 528 | WP_000153280.1 | phage N-6-adenine-methyltransferase | - |
| G5S56_RS08640 (1805972) | 1805972..1806148 | + | 177 | WP_078167352.1 | NinE family protein | - |
| G5S56_RS08645 (1806190) | 1806190..1806498 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| G5S56_RS08650 (1806488) | 1806488..1806817 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G5S56_RS08655 (1807024) | 1807024..1807410 | - | 387 | Protein_1693 | TerL protein | - |
| G5S56_RS08660 (1807413) | 1807413..1807970 | - | 558 | WP_078167353.1 | terminase small subunit | - |
| G5S56_RS08665 (1808072) | 1808072..1808329 | - | 258 | WP_078167354.1 | hypothetical protein | - |
| G5S56_RS08670 (1808326) | 1808326..1808823 | - | 498 | WP_078167355.1 | KilA-N domain-containing protein | - |
| G5S56_RS08675 (1809029) | 1809029..1809496 | - | 468 | WP_078167356.1 | lysis protein | - |
| G5S56_RS08680 (1809493) | 1809493..1809990 | - | 498 | WP_178966610.1 | lysozyme RrrD | - |
| G5S56_RS25160 (1809990) | 1809990..1810118 | - | 129 | Protein_1699 | phage holin | - |
| G5S56_RS08695 (1811383) | 1811383..1811472 | - | 90 | Protein_1701 | phage holin | - |
| G5S56_RS08710 (1812005) | 1812005..1812379 | - | 375 | Protein_1702 | antitermination protein | - |
| G5S56_RS08720 (1813623) | 1813623..1814042 | + | 420 | Protein_1704 | amino acid permease | - |
| G5S56_RS08725 (1814043) | 1814043..1814951 | - | 909 | WP_078167258.1 | LysR family transcriptional regulator | - |
| G5S56_RS08730 (1815051) | 1815051..1815641 | + | 591 | WP_001190385.1 | NAD(P)H oxidoreductase | - |
| G5S56_RS08735 (1815723) | 1815723..1816463 | - | 741 | WP_000111044.1 | pyruvate formate lyase 1-activating protein | - |
| G5S56_RS08740 (1816655) | 1816655..1818937 | - | 2283 | WP_001292813.1 | formate C-acetyltransferase | - |
| G5S56_RS08745 (1818992) | 1818992..1819849 | - | 858 | WP_000642546.1 | formate transporter FocA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|