MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 72245 bp
Accession: NZ_CP049274 Location: 33692..105936 Organism: Campylobacter concisus strain P10CDO-S2 Replicon: chromosome
Accession: NZ_CP049274 Location: 33692..105936 Organism: Campylobacter concisus strain P10CDO-S2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVT06_RS00135 () | 29247..29945 | + | 699 | WP_107793692.1 | dipeptidase PepE | - |
| CVT06_RS00140 () | 29960..31270 | + | 1311 | WP_103577250.1 | C4-dicarboxylate transporter DcuC | - |
| CVT06_RS00145 () | 31282..32505 | + | 1224 | WP_107793693.1 | peptidase T | - |
| CVT06_RS00150 () | 32565..33554 | + | 990 | WP_107793694.1 | argininosuccinate synthase | - |
| CVT06_RS00160 () | 34158..35573 | + | 1416 | WP_107793695.1 | hypothetical protein | - |
| CVT06_RS00165 () | 35858..41842 | + | 5985 | WP_196380747.1 | retention module-containing protein | - |
| CVT06_RS00170 () | 41886..42107 | - | 222 | WP_107793907.1 | hypothetical protein | - |
| CVT06_RS00175 () | 42738..44486 | - | 1749 | WP_107793908.1 | hypothetical protein ; Integrase | Integrase |
| CVT06_RS00180 () | 45086..46237 | + | 1152 | WP_103583752.1 | hypothetical protein | - |
| CVT06_RS00185 () | 46343..48097 | + | 1755 | WP_103583606.1 | response regulator | - |
| CVT06_RS00190 () | 48188..49354 | + | 1167 | WP_103583607.1 | hypothetical protein | - |
| CVT06_RS00195 () | 49368..50156 | + | 789 | WP_103583608.1 | cell surface protein | - |
| CVT06_RS00200 () | 50217..50474 | - | 258 | WP_103583615.1 | hypothetical protein | - |
| CVT06_RS00205 () | 51038..51901 | - | 864 | Protein_38 | flagellar biosynthesis protein FlgG | - |
| CVT06_RS00210 () | 52000..52068 | + | 69 | Protein_39 | conjugal transfer protein TraG | - |
| CVT06_RS00215 () | 52108..53293 | + | 1186 | Protein_40 | hypothetical protein ; Integrase | Integrase |
| CVT06_RS00220 () | 53300..53951 | + | 652 | Protein_41 | DUF4368 domain-containing protein | - |
| CVT06_RS00225 () | 53954..55135 | - | 1182 | WP_009295469.1 | DNA (cytosine-5-)-methyltransferase | - |
| CVT06_RS00230 () | 55238..56155 | + | 918 | WP_009295468.1 | type II restriction endonuclease SsoII | - |
| CVT06_RS00235 () | 56233..56586 | + | 354 | WP_009295467.1 | cupin domain-containing protein | - |
| CVT06_RS00240 () | 57022..57276 | + | 255 | Protein_45 | DUF3847 domain-containing protein | - |
| CVT06_RS00245 () | 57818..58481 | + | 664 | Protein_46 | replisome organizer | - |
| CVT06_RS00250 () | 58589..59426 | + | 838 | Protein_47 | ATP-binding protein | - |
| CVT06_RS00255 () | 59488..59661 | + | 174 | WP_009295461.1 | transposon-encoded TnpW family protein | - |
| CVT06_RS00260 () | 60334..61929 | - | 1596 | WP_196380748.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CVT06_RS00265 () | 61977..62306 | - | 330 | WP_196380749.1 | hypothetical protein | - |
| CVT06_RS00270 () | 62671..62958 | - | 288 | WP_021084979.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CVT06_RS00275 () | 62948..63199 | - | 252 | WP_103604484.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| CVT06_RS00280 () | 63282..65054 | - | 1773 | WP_196380771.1 | hypothetical protein ; Integrase | Integrase |
| CVT06_RS00285 () | 65843..66544 | + | 702 | WP_009294402.1 | IS1595 family transposase ISCamsp1 | Transposase |
| CVT06_RS00290 () | 67189..67491 | + | 303 | WP_087584838.1 | hypothetical protein | - |
| CVT06_RS00295 () | 67469..68014 | + | 546 | WP_107793893.1 | hypothetical protein | - |
| CVT06_RS00300 () | 68167..68529 | + | 363 | WP_084109992.1 | plasmid mobilization relaxosome protein MobC | - |
| CVT06_RS00305 () | 68519..70969 | + | 2451 | WP_107793894.1 | aminotransferase | - |
| CVT06_RS00310 () | 71028..72242 | - | 1215 | WP_107793895.1 | ATP-binding protein | - |
| CVT06_RS00315 () | 72545..72748 | - | 204 | Protein_60 | hypothetical protein | - |
| CVT06_RS00320 () | 72744..72977 | + | 234 | WP_107695782.1 | transposase | - |
| CVT06_RS00325 () | 72974..73510 | + | 537 | WP_103618890.1 | ISL3 family transposase ISHaha2 | Transposase |
| CVT06_RS00330 () | 73667..74104 | + | 438 | Protein_63 | DUF2088 domain-containing protein | - |
| CVT06_RS00335 () | 74164..75582 | + | 1419 | WP_103618889.1 | nickel pincer cofactor biosynthesis protein LarC | - |
| CVT06_RS00340 () | 75554..76333 | + | 780 | WP_103574091.1 | ATP-dependent sacrificial sulfur transferase LarE | - |
| CVT06_RS00345 () | 76320..77066 | + | 747 | WP_103618888.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| CVT06_RS00350 () | 77071..77319 | + | 249 | WP_009295498.1 | hypothetical protein | - |
| CVT06_RS00355 () | 77480..77953 | - | 474 | WP_103574089.1 | N-acetyltransferase | - |
| CVT06_RS00360 () | 77962..78843 | - | 882 | WP_107793897.1 | hypothetical protein | - |
| CVT06_RS00365 () | 78850..79221 | - | 372 | WP_103574087.1 | ASCH domain-containing protein | - |
| CVT06_RS00370 () | 79199..80257 | - | 1059 | WP_009295492.1 | GNAT family N-acetyltransferase | - |
| CVT06_RS00375 () | 80501..80971 | + | 471 | WP_107793898.1 | DUF2809 domain-containing protein | - |
| CVT06_RS00380 () | 80964..81863 | + | 900 | WP_103574086.1 | L(+)-tartrate dehydratase subunit alpha | - |
| CVT06_RS00385 () | 81860..81949 | + | 90 | Protein_74 | L(+)-tartrate dehydratase subunit beta | - |
| CVT06_RS00390 () | 81961..82107 | + | 147 | WP_196380750.1 | hypothetical protein | - |
| CVT06_RS00395 () | 82306..83328 | + | 1023 | WP_107793899.1 | putative ABC transporter permease protein | VF |
| CVT06_RS00400 () | 83325..84110 | + | 786 | WP_009295486.1 | putative ABC transporter ATP-binding protein | VF |
| CVT06_RS00405 () | 84185..85081 | + | 897 | WP_169766431.1 | aldo/keto reductase | - |
| CVT06_RS00410 () | 85099..86172 | + | 1074 | WP_009649437.1 | ABC transporter substrate-binding protein | - |
| CVT06_RS00415 () | 86292..86804 | + | 513 | WP_103574084.1 | hypothetical protein | - |
| CVT06_RS00420 () | 87265..89406 | - | 2142 | WP_107793900.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CVT06_RS00425 () | 89743..89894 | - | 152 | Protein_82 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| CVT06_RS00430 () | 89884..89979 | - | 96 | Protein_83 | antitoxin | - |
| CVT06_RS00435 () | 90113..92452 | + | 2340 | WP_107793901.1 | type I restriction-modification system subunit M | - |
| CVT06_RS00440 () | 92454..93761 | + | 1308 | WP_107793902.1 | restriction endonuclease subunit S | - |
| CVT06_RS00445 () | 93763..94896 | + | 1134 | WP_107793903.1 | hypothetical protein | - |
| CVT06_RS00450 () | 94889..95365 | + | 477 | WP_107793904.1 | hypothetical protein | - |
| CVT06_RS00455 () | 95362..97350 | + | 1989 | WP_107793905.1 | DUF3732 domain-containing protein | - |
| CVT06_RS00460 () | 97408..100386 | + | 2979 | WP_107793906.1 | type I restriction endonuclease subunit R | - |
| CVT06_RS00465 () | 100871..102463 | - | 1593 | WP_196380772.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CVT06_RS00470 () | 102511..102840 | - | 330 | WP_196380751.1 | hypothetical protein | - |
| CVT06_RS00475 () | 103205..103492 | - | 288 | WP_021084979.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CVT06_RS00480 () | 103482..103733 | - | 252 | WP_103604484.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| CVT06_RS00485 () | 103816..105597 | - | 1782 | WP_196380773.1 | hypothetical protein ; Integrase | Integrase |
| CVT06_RS00490 () | 106597..107025 | + | 429 | WP_159071387.1 | hypothetical protein | - |
| CVT06_RS00495 () | 107237..107827 | + | 591 | WP_159071386.1 | hypothetical protein | - |
| CVT06_RS00500 () | 107967..108341 | + | 375 | WP_159071385.1 | hypothetical protein | - |
| CVT06_RS00505 () | 108341..108625 | + | 285 | WP_107793917.1 | hypothetical protein | - |
| CVT06_RS00510 () | 108873..109340 | + | 468 | WP_054195914.1 | type VI secretion system lipoprotein TssJ | - |
| CVT06_RS00515 () | 109342..110736 | + | 1395 | WP_107793916.1 | type VI secretion system baseplate subunit TssK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|