MGE detailed information
MGE type: Prophage MGE length: 55937 bp
Accession: NZ_CP049201 Location: 4650134..4706070 Organism: Escherichia coli strain PapRG-04-4 Replicon: chromosome
Accession: NZ_CP049201 Location: 4650134..4706070 Organism: Escherichia coli strain PapRG-04-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6Z99_RS22390 () | 4645778..4646179 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| G6Z99_RS22395 () | 4646218..4647273 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| G6Z99_RS22400 () | 4647561..4648664 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| G6Z99_RS22405 () | 4648676..4649929 | + | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| G6Z99_RS22415 () | 4650134..4651297 | - | 1164 | WP_000051893.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| G6Z99_RS22425 () | 4651524..4651829 | - | 306 | WP_000206734.1 | hypothetical protein | - |
| G6Z99_RS22430 () | 4651829..4652191 | - | 363 | WP_001242749.1 | phage protein | - |
| G6Z99_RS22435 () | 4652182..4652718 | - | 537 | WP_001605537.1 | 5'-deoxynucleotidase | - |
| G6Z99_RS22440 () | 4652846..4653670 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| G6Z99_RS22445 () | 4653736..4654098 | - | 363 | WP_000135682.1 | hypothetical protein | - |
| G6Z99_RS22450 () | 4654113..4654424 | - | 312 | Protein_4391 | hypothetical protein | - |
| G6Z99_RS22455 () | 4654700..4654996 | - | 297 | WP_000917896.1 | hypothetical protein | - |
| G6Z99_RS22460 () | 4655169..4655843 | - | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| G6Z99_RS22465 () | 4655934..4656134 | + | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| G6Z99_RS22470 () | 4656178..4656729 | + | 552 | WP_000515828.1 | protein YmfL | - |
| G6Z99_RS22475 () | 4656905..4657084 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| G6Z99_RS22480 () | 4657074..4658015 | + | 942 | WP_000104967.1 | helix-turn-helix domain-containing protein | - |
| G6Z99_RS22485 () | 4658012..4658506 | + | 495 | WP_021576994.1 | PerC family transcriptional regulator | - |
| G6Z99_RS22490 () | 4658506..4659159 | + | 654 | WP_001355692.1 | phage N-6-adenine-methyltransferase | - |
| G6Z99_RS22495 () | 4659156..4659482 | + | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| G6Z99_RS22500 () | 4659479..4659868 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G6Z99_RS22505 () | 4659888..4660685 | + | 798 | WP_001061418.1 | KilA-N domain-containing protein | - |
| G6Z99_RS22510 () | 4660693..4661682 | + | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| G6Z99_RS22515 () | 4661697..4662065 | + | 369 | WP_085948622.1 | antitermination protein Q | - |
| G6Z99_RS22520 () | 4662094..4663425 | - | 1332 | WP_050921965.1 | KAP family P-loop domain protein | - |
| G6Z99_RS22525 () | 4663722..4664048 | + | 327 | WP_001120490.1 | phage holin, lambda family | - |
| G6Z99_RS22530 () | 4664052..4664528 | + | 477 | WP_021540768.1 | glycoside hydrolase family protein | - |
| G6Z99_RS22535 () | 4664512..4664973 | + | 462 | WP_021533220.1 | lysis protein | - |
| G6Z99_RS22540 () | 4665051..4665321 | + | 271 | Protein_4409 | hypothetical protein | - |
| G6Z99_RS22545 () | 4665583..4665894 | + | 312 | WP_021533221.1 | hypothetical protein | - |
| G6Z99_RS22550 () | 4665884..4666270 | + | 387 | WP_021533222.1 | hypothetical protein | - |
| G6Z99_RS22555 () | 4666316..4666618 | + | 303 | WP_001607219.1 | hypothetical protein | - |
| G6Z99_RS22560 () | 4666704..4667054 | + | 351 | WP_074488041.1 | HNH endonuclease | - |
| G6Z99_RS22565 () | 4667180..4667674 | + | 495 | WP_000929182.1 | phage terminase small subunit P27 family | - |
| G6Z99_RS22570 () | 4667908..4669404 | + | 1497 | WP_122989116.1 | terminase large subunit | - |
| G6Z99_RS22575 () | 4669416..4669598 | + | 183 | WP_021533224.1 | hypothetical protein | - |
| G6Z99_RS22580 () | 4669598..4670839 | + | 1242 | WP_001764252.1 | phage portal protein | - |
| G6Z99_RS22585 () | 4670817..4671467 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| G6Z99_RS22590 () | 4671482..4672687 | + | 1206 | WP_164476081.1 | phage major capsid protein | - |
| G6Z99_RS22595 () | 4672737..4672937 | + | 201 | WP_000601360.1 | hypothetical protein | - |
| G6Z99_RS22600 () | 4672940..4673263 | + | 324 | WP_000927719.1 | head-tail connector protein | - |
| G6Z99_RS22605 () | 4673260..4673670 | + | 411 | WP_000702401.1 | phage head closure protein | - |
| G6Z99_RS22610 () | 4673645..4674151 | + | 507 | WP_000224838.1 | hypothetical protein | - |
| G6Z99_RS22615 () | 4674148..4674708 | + | 561 | WP_000779281.1 | hypothetical protein | - |
| G6Z99_RS22620 () | 4674717..4674887 | + | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| G6Z99_RS22625 () | 4674871..4676367 | + | 1497 | WP_164476082.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| G6Z99_RS22630 () | 4676367..4676723 | + | 357 | WP_000090998.1 | phage tail tube protein | - |
| G6Z99_RS22635 () | 4676720..4677043 | + | 324 | WP_000571713.1 | phage tail assembly protein | - |
| G6Z99_RS22640 () | 4677128..4679035 | + | 1908 | WP_021533227.1 | phage tail tape measure protein | - |
| G6Z99_RS22645 () | 4679060..4680436 | + | 1377 | WP_000366152.1 | DNA circularization N-terminal domain-containing protein | - |
| G6Z99_RS22650 () | 4680433..4681512 | + | 1080 | WP_000999509.1 | baseplate protein | - |
| G6Z99_RS22655 () | 4681512..4682060 | + | 549 | WP_001259084.1 | phage baseplate assembly protein V | - |
| G6Z99_RS22660 () | 4682060..4682485 | + | 426 | WP_164476263.1 | phage GP46 family protein | - |
| G6Z99_RS22665 () | 4682472..4683530 | + | 1059 | WP_064576231.1 | baseplate J/gp47 family protein | - |
| G6Z99_RS22670 () | 4683521..4684105 | + | 585 | WP_000383548.1 | YmfQ family protein | - |
| G6Z99_RS22675 () | 4684109..4684771 | + | 663 | Protein_4436 | hypothetical protein | - |
| G6Z99_RS22680 () | 4684842..4685235 | + | 394 | Protein_4437 | tail fiber assembly protein | - |
| G6Z99_RS22685 () | 4685207..4685806 | - | 600 | Protein_4438 | tail fiber assembly protein | - |
| G6Z99_RS22690 () | 4685806..4686338 | - | 533 | Protein_4439 | tail fiber protein | - |
| G6Z99_RS22695 () | 4686368..4686922 | + | 555 | WP_164476083.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| G6Z99_RS22700 () | 4686980..4687754 | - | 775 | Protein_4441 | hypothetical protein | - |
| G6Z99_RS22705 () | 4688572..4689315 | + | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| G6Z99_RS22710 () | 4689357..4689791 | - | 435 | Protein_4443 | IS3 family transposase ISEc48 | Transposase |
| G6Z99_RS22715 () | 4690281..4691471 | + | 1191 | WP_097731891.1 | Prophage integrase IntS ; Integrase | Integrase |
| G6Z99_RS22720 () | 4692057..4692260 | + | 204 | WP_097731892.1 | AlpA family transcriptional regulator | - |
| G6Z99_RS22725 () | 4692460..4693332 | + | 873 | WP_164476084.1 | hypothetical protein | - |
| G6Z99_RS22730 () | 4693342..4694349 | + | 1008 | WP_164476085.1 | P2 family phage major capsid protein | - |
| G6Z99_RS22735 () | 4694562..4694753 | - | 192 | WP_112886723.1 | hypothetical protein | - |
| G6Z99_RS22740 () | 4694961..4695164 | + | 204 | WP_164476086.1 | host cell division inhibitor Icd-like protein | - |
| G6Z99_RS22745 () | 4695157..4695405 | + | 249 | WP_164476087.1 | hypothetical protein | - |
| G6Z99_RS22750 () | 4695398..4695823 | + | 426 | WP_130210776.1 | hypothetical protein | - |
| G6Z99_RS22755 () | 4695816..4696214 | + | 399 | WP_164476088.1 | hypothetical protein | - |
| G6Z99_RS22760 () | 4696311..4696580 | + | 270 | WP_115424602.1 | Derepression protein | - |
| G6Z99_RS22765 () | 4696644..4699376 | + | 2733 | WP_164476089.1 | DUF927 domain-containing protein | - |
| G6Z99_RS22770 () | 4699571..4699768 | - | 198 | WP_164476090.1 | hypothetical protein | - |
| G6Z99_RS22775 () | 4699761..4700726 | + | 966 | WP_164476091.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G6Z99_RS22780 () | 4700755..4701012 | - | 258 | WP_164476092.1 | ogr/Delta-like zinc finger family protein | - |
| G6Z99_RS22785 () | 4701496..4701741 | + | 246 | WP_052932205.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| G6Z99_RS22790 () | 4701741..4702001 | + | 261 | WP_112886714.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| G6Z99_RS22795 () | 4702321..4703220 | - | 900 | WP_097750698.1 | HTH-type transcriptional regulator PgrR | VF |
| G6Z99_RS22800 () | 4703319..4704041 | + | 723 | WP_164476093.1 | putative oxidoreductase | VF |
| G6Z99_RS22805 () | 4704207..4704485 | + | 279 | WP_089629567.1 | hypothetical protein | - |
| G6Z99_RS22810 () | 4705186..4706070 | - | 885 | WP_023307638.1 | HTH-type transcriptional regulator PgrR | VF |
| G6Z99_RS22815 () | 4706335..4707393 | + | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| G6Z99_RS22820 () | 4707535..4708662 | + | 1128 | WP_164476264.1 | MFS transporter | - |
| G6Z99_RS22825 () | 4708841..4709797 | - | 957 | WP_164476094.1 | molybdenum cofactor insertion chaperone PaoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|