MGE detailed information
MGE type: Prophage MGE length: 62273 bp
Accession: NZ_CP049198 Location: 1337562..1399834 Organism: Escherichia coli strain E686 Replicon: chromosome
Accession: NZ_CP049198 Location: 1337562..1399834 Organism: Escherichia coli strain E686 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6000_RS06395 () | 1333461..1334681 | + | 1221 | WP_021523109.1 | DNA-binding transcriptional repressor Mlc | - |
| G6000_RS06400 () | 1334806..1335501 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| G6000_RS06405 () | 1335454..1336746 | - | 1293 | WP_071593650.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G6000_RS06410 () | 1336905..1337519 | - | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
| G6000_RS06415 () | 1337562..1338416 | - | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| G6000_RS06420 () | 1338418..1339035 | - | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| G6000_RS06425 () | 1339046..1341469 | - | 2424 | WP_089502603.1 | dimethyl sulfoxide reductase subunit A | - |
| G6000_RS06430 () | 1341530..1343956 | - | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
| G6000_RS06435 () | 1344155..1344460 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| G6000_RS06440 () | 1344568..1345278 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| G6000_RS06445 () | 1345281..1345841 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| G6000_RS06450 () | 1345876..1346217 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| G6000_RS06455 () | 1346352..1346678 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| G6000_RS06460 () | 1346884..1348098 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| G6000_RS06465 () | 1348110..1349129 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| G6000_RS06470 () | 1349187..1349315 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| G6000_RS06475 () | 1349317..1350597 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| G6000_RS06480 () | 1350632..1350883 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| G6000_RS06485 () | 1350956..1353427 | - | 2472 | WP_000048363.1 | exonuclease | - |
| G6000_RS06490 () | 1353521..1353712 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| G6000_RS06495 () | 1353709..1353897 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G6000_RS06500 () | 1354384..1354959 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| G6000_RS06505 () | 1354961..1355116 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| G6000_RS06510 () | 1355285..1355692 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| G6000_RS06515 () | 1355773..1356000 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| G6000_RS06520 () | 1355984..1356505 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| G6000_RS06525 () | 1356486..1357451 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| G6000_RS06530 () | 1357492..1357890 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| G6000_RS06535 () | 1358093..1358758 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| G6000_RS06540 () | 1358967..1359581 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| G6000_RS06545 () | 1359578..1360606 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| G6000_RS06550 () | 1361090..1362403 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| G6000_RS06555 () | 1362840..1363172 | - | 333 | WP_001301033.1 | protein FlxA | - |
| G6000_RS06560 () | 1363375..1363680 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| G6000_RS06565 () | 1363705..1363944 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G6000_RS06570 () | 1363944..1364231 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G6000_RS06575 () | 1364303..1364458 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G6000_RS06580 () | 1364675..1364926 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| G6000_RS06585 () | 1364993..1365271 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| G6000_RS06590 () | 1365273..1366322 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| G6000_RS06595 () | 1366336..1367088 | + | 753 | WP_001047135.1 | antitermination protein | - |
| G6000_RS06600 () | 1367366..1367455 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| G6000_RS06605 () | 1367510..1367722 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| G6000_RS06610 () | 1368023..1368238 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| G6000_RS06615 () | 1368992..1369207 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| G6000_RS06620 () | 1369212..1369523 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| G6000_RS06625 () | 1369520..1370053 | + | 534 | WP_001092971.1 | lysozyme | - |
| G6000_RS06630 () | 1370050..1370547 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| G6000_RS06635 () | 1370910..1371122 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G6000_RS06640 () | 1371133..1371321 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G6000_RS06645 () | 1371324..1371389 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| G6000_RS06650 () | 1371469..1371624 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| G6000_RS06655 () | 1371796..1371969 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G6000_RS06660 () | 1372121..1372531 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| G6000_RS06665 () | 1372589..1372822 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G6000_RS06670 () | 1373211..1373756 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| G6000_RS06675 () | 1373731..1375656 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| G6000_RS06680 () | 1375653..1375859 | + | 207 | WP_000198149.1 | gpW family protein | - |
| G6000_RS06685 () | 1375856..1377457 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| G6000_RS06690 () | 1377438..1378757 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| G6000_RS06695 () | 1378767..1379099 | + | 333 | WP_001708751.1 | head decoration protein | - |
| G6000_RS06700 () | 1379154..1380179 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| G6000_RS06705 () | 1380221..1380619 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| G6000_RS06710 () | 1380631..1380984 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| G6000_RS06715 () | 1380996..1381574 | + | 579 | WP_000975070.1 | phage tail protein | - |
| G6000_RS06720 () | 1381571..1381966 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| G6000_RS06725 () | 1381974..1382714 | + | 741 | WP_001349920.1 | phage tail protein | - |
| G6000_RS06730 () | 1382730..1383152 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| G6000_RS06735 () | 1383134..1383568 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| G6000_RS06740 () | 1383561..1386122 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| G6000_RS06745 () | 1386119..1386448 | + | 330 | WP_000847345.1 | phage tail protein | - |
| G6000_RS06750 () | 1386448..1387146 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| G6000_RS24515 () | 1387152..1387894 | + | 743 | Protein_1319 | phage tail protein | - |
| G6000_RS06765 () | 1387831..1388432 | + | 602 | Protein_1320 | tail assembly protein | - |
| G6000_RS06770 () | 1388493..1391971 | + | 3479 | Protein_1321 | host specificity protein J | - |
| G6000_RS06775 () | 1392039..1392638 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| G6000_RS06780 () | 1392703..1395102 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| G6000_RS06785 () | 1395099..1395380 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| G6000_RS06790 () | 1395390..1396094 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| G6000_RS06795 () | 1396105..1396398 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| G6000_RS06800 () | 1396418..1396528 | + | 111 | Protein_1327 | tail fiber assembly protein | - |
| G6000_RS06805 () | 1396626..1397216 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| G6000_RS06810 () | 1397533..1397766 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G6000_RS06815 () | 1397835..1397948 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| G6000_RS06820 () | 1398552..1399834 | + | 1283 | Protein_1331 | MHS family MFS transporter YdfJ | - |
| G6000_RS06825 () | 1399923..1401383 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| G6000_RS06830 () | 1401419..1401622 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G6000_RS06835 () | 1401800..1402486 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| G6000_RS06840 () | 1402575..1403321 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|