MGE detailed information
MGE type: Prophage MGE length: 52440 bp
Accession: NZ_CP049196 Location: 1848294..1900733 Organism: Escherichia coli strain E118 Replicon: chromosome
Accession: NZ_CP049196 Location: 1848294..1900733 Organism: Escherichia coli strain E118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5T40_RS08795 () | 1843675..1844385 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| G5T40_RS08800 () | 1844388..1844948 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| G5T40_RS08805 () | 1844983..1845324 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| G5T40_RS08810 () | 1845459..1845785 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| G5T40_RS08815 () | 1845991..1847205 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| G5T40_RS08820 () | 1847217..1848236 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| G5T40_RS08825 () | 1848294..1848422 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| G5T40_RS08830 () | 1848424..1849704 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| G5T40_RS08835 () | 1849739..1849990 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| G5T40_RS08840 () | 1850063..1852534 | - | 2472 | WP_000048363.1 | exonuclease | - |
| G5T40_RS08845 () | 1852628..1852819 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| G5T40_RS08850 () | 1852816..1853004 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G5T40_RS08855 () | 1853491..1854066 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| G5T40_RS08860 () | 1854068..1854223 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| G5T40_RS08865 () | 1854392..1854799 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| G5T40_RS08870 () | 1854880..1855107 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| G5T40_RS08875 () | 1855091..1855612 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| G5T40_RS08880 () | 1855593..1856558 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| G5T40_RS08885 () | 1856599..1856997 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| G5T40_RS08890 () | 1857200..1857865 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| G5T40_RS08895 () | 1858074..1858688 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| G5T40_RS08900 () | 1858685..1859713 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| G5T40_RS08905 () | 1860197..1861510 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| G5T40_RS08910 () | 1861947..1862279 | - | 333 | WP_001301033.1 | protein FlxA | - |
| G5T40_RS08915 () | 1862482..1862787 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| G5T40_RS08920 () | 1862812..1863051 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G5T40_RS08925 () | 1863051..1863338 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G5T40_RS08930 () | 1863410..1863565 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G5T40_RS08935 () | 1863782..1864033 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| G5T40_RS08940 () | 1864100..1864378 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| G5T40_RS08945 () | 1864380..1865429 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| G5T40_RS08950 () | 1865443..1866195 | + | 753 | WP_001047135.1 | antitermination protein | - |
| G5T40_RS08955 () | 1866473..1866562 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| G5T40_RS08960 () | 1866617..1866829 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| G5T40_RS08965 () | 1867130..1867345 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| G5T40_RS08970 () | 1868099..1868314 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| G5T40_RS08975 () | 1868319..1868630 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| G5T40_RS08980 () | 1868627..1869160 | + | 534 | WP_001092971.1 | lysozyme | - |
| G5T40_RS08985 () | 1869157..1869654 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| G5T40_RS08990 () | 1870017..1870229 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G5T40_RS08995 () | 1870240..1870428 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G5T40_RS09000 () | 1870431..1870496 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| G5T40_RS09005 () | 1870576..1870731 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| G5T40_RS09010 () | 1870903..1871076 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G5T40_RS09015 () | 1871228..1871638 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| G5T40_RS09020 () | 1871696..1871929 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G5T40_RS09025 () | 1872318..1872863 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| G5T40_RS09030 () | 1872838..1874763 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| G5T40_RS09035 () | 1874760..1874966 | + | 207 | WP_000198149.1 | gpW family protein | - |
| G5T40_RS09040 () | 1874963..1876564 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| G5T40_RS09045 () | 1876545..1877864 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| G5T40_RS09050 () | 1877874..1878206 | + | 333 | WP_001708751.1 | head decoration protein | - |
| G5T40_RS09055 () | 1878261..1879286 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| G5T40_RS09060 () | 1879328..1879726 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| G5T40_RS09065 () | 1879738..1880091 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| G5T40_RS09070 () | 1880103..1880681 | + | 579 | WP_000975070.1 | phage tail protein | - |
| G5T40_RS09075 () | 1880678..1881073 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| G5T40_RS09080 () | 1881081..1881821 | + | 741 | WP_001349920.1 | phage tail protein | - |
| G5T40_RS09085 () | 1881837..1882259 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| G5T40_RS09090 () | 1882241..1882675 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| G5T40_RS09095 () | 1882668..1885229 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| G5T40_RS09100 () | 1885226..1885555 | + | 330 | WP_000847345.1 | phage tail protein | - |
| G5T40_RS09105 () | 1885555..1886253 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| G5T40_RS09110 () | 1886259..1887002 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| G5T40_RS09115 () | 1886939..1887541 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| G5T40_RS09120 () | 1887602..1891081 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| G5T40_RS09125 () | 1891149..1891748 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| G5T40_RS09130 () | 1891813..1894212 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| G5T40_RS09135 () | 1894209..1894490 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| G5T40_RS09140 () | 1894500..1895204 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| G5T40_RS09145 () | 1895215..1895508 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| G5T40_RS09150 () | 1895528..1895638 | + | 111 | Protein_1787 | tail fiber assembly protein | - |
| G5T40_RS09155 () | 1895736..1896326 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| G5T40_RS09160 () | 1896643..1896876 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G5T40_RS09165 () | 1896945..1897058 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| G5T40_RS09170 () | 1897662..1898945 | + | 1284 | Protein_1791 | MHS family MFS transporter YdfJ | - |
| G5T40_RS09175 () | 1899034..1900494 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| G5T40_RS09180 () | 1900530..1900733 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G5T40_RS09185 () | 1900911..1901597 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| G5T40_RS09190 () | 1901686..1902432 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| G5T40_RS09195 () | 1902569..1904614 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| G5T40_RS09200 () | 1904979..1905371 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|