MGE detailed information
MGE type: Prophage MGE length: 34605 bp
Accession: NZ_CP049179 Location: 4183603..4218207 Organism: Shigella sonnei strain L4094 Replicon: chromosome
Accession: NZ_CP049179 Location: 4183603..4218207 Organism: Shigella sonnei strain L4094 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O64_RS21075 () | 4179459..4180259 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| G6O64_RS21080 () | 4180272..4181123 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G6O64_RS21085 () | 4181178..4181636 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| G6O64_RS21090 () | 4182065..4182631 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G6O64_RS21095 () | 4182628..4183437 | - | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G6O64_RS21100 () | 4183603..4183812 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G6O64_RS21105 () | 4183825..4183968 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| G6O64_RS21110 () | 4184638..4184925 | - | 288 | WP_001006860.1 | YebO family protein | - |
| G6O64_RS21115 () | 4185000..4185143 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G6O64_RS21120 () | 4185302..4185541 | + | 240 | WP_001211011.1 | YobH family protein | - |
| G6O64_RS21125 () | 4185684..4186475 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| G6O64_RS21130 () | 4186652..4187715 | + | 1064 | Protein_4120 | MFS transporter | - |
| G6O64_RS21135 () | 4187761..4188642 | - | 882 | WP_000984517.1 | protease HtpX | - |
| G6O64_RS21140 () | 4188834..4190882 | - | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| G6O64_RS21145 () | 4190902..4191600 | - | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| G6O64_RS21150 () | 4191697..4192194 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| G6O64_RS21155 () | 4192324..4193607 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| G6O64_RS21160 () | 4193576..4196209 | + | 2634 | WP_005138565.1 | hypothetical protein | VF |
| G6O64_RS21165 () | 4196290..4197729 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G6O64_RS21170 () | 4197847..4197930 | + | 84 | Protein_4128 | DUF1480 family protein | - |
| G6O64_RS21180 () | 4198702..4198860 | + | 159 | Protein_4130 | DUF1480 family protein | - |
| G6O64_RS21185 () | 4198965..4199156 | + | 192 | WP_001296140.1 | YebW family protein | - |
| G6O64_RS21190 () | 4199157..4199357 | - | 201 | Protein_4132 | serine/threonine-protein phosphatase | - |
| G6O64_RS21200 () | 4200613..4200918 | - | 306 | Protein_4134 | serine/threonine-protein phosphatase | - |
| G6O64_RS21205 () | 4200973..4201670 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O64_RS21210 () | 4201684..4201857 | - | 174 | Protein_4136 | metallophosphoesterase | - |
| G6O64_RS21215 () | 4202508..4203664 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| G6O64_RS21220 () | 4203866..4205581 | + | 1716 | WP_011310192.1 | hypothetical protein | VF |
| G6O64_RS21225 () | 4205697..4206852 | - | 1156 | Protein_4139 | IS3-like element IS600 family transposase | - |
| G6O64_RS21230 () | 4206997..4207257 | + | 261 | WP_077447296.1 | excisionase | - |
| G6O64_RS21235 () | 4207286..4207740 | + | 455 | Protein_4141 | IS1-like element IS1A family transposase | - |
| G6O64_RS21240 () | 4207835..4209063 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| G6O64_RS21245 () | 4209074..4209319 | + | 246 | Protein_4143 | IS1 family transposase IS1R | Transposase |
| G6O64_RS21250 () | 4209356..4210432 | + | 1077 | WP_052987259.1 | hypothetical protein ; Integrase | Integrase |
| - | 4210563..4210797 | + | 235 | - | - | Antitoxin Detail |
| - | 4210564..4210667 | - | 104 | - | - | Toxin Detail |
| G6O64_RS21255 () | 4210825..4211166 | - | 342 | WP_000976476.1 | YebY family protein | - |
| G6O64_RS21260 () | 4211179..4212051 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| G6O64_RS21265 () | 4212055..4212429 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| G6O64_RS21270 () | 4212568..4212798 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G6O64_RS21275 () | 4212900..4213556 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| G6O64_RS21280 () | 4213580..4214242 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G6O64_RS21285 () | 4214239..4216299 | - | 2061 | WP_000936913.1 | oligopeptidase B | - |
| G6O64_RS21290 () | 4216508..4217167 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| G6O64_RS21295 () | 4217494..4217850 | - | 357 | WP_001295500.1 | protein YebF | - |
| G6O64_RS21300 () | 4217917..4218207 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G6O64_RS21305 () | 4218341..4219519 | + | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G6O64_RS21310 () | 4219575..4220216 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G6O64_RS21315 () | 4220253..4222064 | - | 1812 | WP_001069438.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|