MGE detailed information
MGE type: Prophage MGE length: 32697 bp
Accession: NZ_CP049177 Location: 1818931..1851627 Organism: Shigella sonnei strain 1205.3131 Replicon: chromosome
Accession: NZ_CP049177 Location: 1818931..1851627 Organism: Shigella sonnei strain 1205.3131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O63_RS09010 () | 1815014..1815655 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G6O63_RS09015 () | 1815711..1816889 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G6O63_RS09020 () | 1817023..1817313 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G6O63_RS09025 () | 1817380..1817736 | + | 357 | WP_001295500.1 | protein YebF | - |
| G6O63_RS09030 () | 1818063..1818722 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| G6O63_RS09035 () | 1818931..1820991 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| G6O63_RS09040 () | 1820988..1821650 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G6O63_RS09045 () | 1821674..1822330 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| G6O63_RS09050 () | 1822432..1822662 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G6O63_RS09055 () | 1822801..1823175 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| G6O63_RS09060 () | 1823179..1824051 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| G6O63_RS09065 () | 1824064..1824405 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 1824433..1824667 | - | 235 | - | - | Antitoxin Detail |
| - | 1824563..1824666 | + | 104 | - | - | Toxin Detail |
| G6O63_RS09070 () | 1824798..1825874 | - | 1077 | WP_052987259.1 | hypothetical protein ; Integrase | Integrase |
| G6O63_RS09075 () | 1825911..1826156 | - | 246 | Protein_1763 | IS1 family transposase IS1R | Transposase |
| G6O63_RS09085 () | 1827490..1827944 | - | 455 | Protein_1765 | IS1-like element IS1A family transposase | - |
| G6O63_RS09090 () | 1827973..1828233 | - | 261 | WP_077447296.1 | excisionase | - |
| G6O63_RS09095 () | 1828378..1829533 | + | 1156 | Protein_1767 | IS3 family transposase IS600 | Transposase |
| G6O63_RS09100 () | 1829649..1831364 | - | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| G6O63_RS09110 () | 1833373..1833546 | + | 174 | Protein_1770 | metallophosphoesterase | - |
| G6O63_RS09120 () | 1834312..1834617 | + | 306 | Protein_1772 | serine/threonine-protein phosphatase | - |
| G6O63_RS09125 () | 1834675..1835831 | + | 1157 | WP_130872889.1 | IS3 family transposase IS600 | Transposase |
| G6O63_RS09130 () | 1835873..1836073 | + | 201 | Protein_1774 | serine/threonine-protein phosphatase | - |
| G6O63_RS09135 () | 1836074..1836265 | - | 192 | WP_001296140.1 | YebW family protein | - |
| G6O63_RS09140 () | 1836370..1836528 | - | 159 | Protein_1776 | DUF1480 family protein | - |
| G6O63_RS09145 () | 1836586..1837283 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| G6O63_RS09150 () | 1837300..1837383 | - | 84 | Protein_1778 | DUF1480 family protein | - |
| G6O63_RS09155 () | 1837501..1838940 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G6O63_RS09160 () | 1839021..1841654 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| G6O63_RS09165 () | 1841623..1842906 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| G6O63_RS09170 () | 1843036..1843533 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| G6O63_RS09175 () | 1843630..1844328 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| G6O63_RS09180 () | 1844348..1846396 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| G6O63_RS09185 () | 1846588..1847469 | + | 882 | WP_000984517.1 | protease HtpX | - |
| G6O63_RS09190 () | 1847515..1848578 | - | 1064 | Protein_1786 | MFS transporter | - |
| G6O63_RS09195 () | 1848755..1849546 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| G6O63_RS09200 () | 1849689..1849928 | - | 240 | WP_001211011.1 | YobH family protein | - |
| G6O63_RS09205 () | 1850087..1850230 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G6O63_RS09210 () | 1850305..1850592 | + | 288 | WP_001006860.1 | YebO family protein | - |
| G6O63_RS09215 () | 1851262..1851405 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| G6O63_RS09220 () | 1851418..1851627 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G6O63_RS09225 () | 1851793..1852602 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G6O63_RS09230 () | 1852599..1853165 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G6O63_RS09235 () | 1853594..1854052 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| G6O63_RS09240 () | 1854107..1854958 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G6O63_RS09245 () | 1854971..1855771 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|