MGE detailed information
MGE type: Conjugative plasmid MGE length: 86143 bp
Accession: NZ_CP049176 Location: 1..86143 Organism: Shigella sonnei strain 7111.69 Replicon: plasmid p7111-69
Accession: NZ_CP049176 Location: 1..86143 Organism: Shigella sonnei strain 7111.69 Replicon: plasmid p7111-69
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O62_RS24595 (1) | 1..291 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| G6O62_RS24600 (306) | 306..857 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| G6O62_RS24605 (947) | 947..4711 | + | 3765 | WP_001141540.1 | DUF5710 domain-containing protein | - |
| G6O62_RS24610 (4729) | 4729..5076 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| G6O62_RS24615 (5073) | 5073..5765 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| G6O62_RS24620 (5776) | 5776..6759 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| G6O62_RS24625 (6762) | 6762..8051 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| G6O62_RS24630 (8051) | 8051..8755 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| G6O62_RS24635 (8755) | 8755..9282 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| G6O62_RS24640 (9333) | 9333..9737 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| G6O62_RS24645 (9801) | 9801..9989 | + | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| G6O62_RS24650 (9973) | 9973..10773 | + | 801 | WP_107372244.1 | IncI1-type conjugal transfer protein TraT | - |
| G6O62_RS24655 (10863) | 10863..13907 | + | 3045 | WP_107372243.1 | IncI1-type conjugal transfer protein TraU | - |
| G6O62_RS24660 (13907) | 13907..14521 | + | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| G6O62_RS24665 (14488) | 14488..15690 | + | 1203 | WP_107372242.1 | IncI1-type conjugal transfer protein TraW | - |
| G6O62_RS24670 (15719) | 15719..16303 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| G6O62_RS24675 (16400) | 16400..18568 | + | 2169 | WP_001774191.1 | DotA/TraY family protein | - |
| G6O62_RS24680 (18642) | 18642..19292 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G6O62_RS24685 (19364) | 19364..19573 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| G6O62_RS24690 (19939) | 19939..20115 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| G6O62_RS24695 (20180) | 20180..20476 | - | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| G6O62_RS24700 (20776) | 20776..21027 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| G6O62_RS24705 (21099) | 21099..21251 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (21301) | 21301..21363 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (21301) | 21301..21363 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (21301) | 21301..21363 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (21301) | 21301..21363 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| G6O62_RS24710 (21572) | 21572..22657 | + | 1086 | WP_000080543.1 | protein finQ | - |
| G6O62_RS24715 (22964) | 22964..24172 | + | 1209 | WP_107372241.1 | hypothetical protein | VF |
| G6O62_RS24720 (24191) | 24191..25261 | + | 1071 | WP_000151590.1 | IncI1-type conjugal transfer protein TrbB | - |
| G6O62_RS24725 (25254) | 25254..27545 | + | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| G6O62_RS24730 (27582) | 27582..30281 | - | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| G6O62_RS24735 (30292) | 30292..30624 | - | 333 | WP_063119516.1 | IncI1-type relaxosome accessory protein NikA | - |
| G6O62_RS24740 (30858) | 30858..31193 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| G6O62_RS24745 (31279) | 31279..32127 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| G6O62_RS24750 (32708) | 32708..32959 | + | 252 | WP_063117899.1 | hypothetical protein | - |
| G6O62_RS24755 (32990) | 32990..33913 | - | 924 | WP_063117900.1 | Recombination-promoting nuclease RpnD | VF |
| G6O62_RS24760 (33910) | 33910..34299 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| G6O62_RS24765 (34476) | 34476..34742 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| G6O62_RS24770 (34834) | 34834..35268 | - | 435 | WP_000218857.1 | hypothetical protein | - |
| G6O62_RS24775 (35997) | 35997..36497 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| G6O62_RS24780 (36959) | 36959..37555 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| G6O62_RS24785 (37552) | 37552..38271 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| G6O62_RS24790 (38268) | 38268..38702 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| G6O62_RS24795 (38755) | 38755..40713 | - | 1959 | WP_078207109.1 | ParB/RepB/Spo0J family partition protein | - |
| G6O62_RS24800 (40772) | 40772..41005 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| G6O62_RS24805 (41063) | 41063..41590 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| G6O62_RS24810 (41974) | 41974..42207 | - | 234 | WP_139288298.1 | hypothetical protein | - |
| G6O62_RS24815 (42360) | 42360..42551 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| G6O62_RS24820 (42548) | 42548..42970 | - | 423 | WP_000271727.1 | DUF1380 family protein | - |
| G6O62_RS24825 (43017) | 43017..43442 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| G6O62_RS24830 (43858) | 43858..44628 | - | 771 | WP_077132299.1 | hypothetical protein | - |
| G6O62_RS24835 (44673) | 44673..45191 | - | 519 | WP_223350510.1 | DUF1380 family protein | - |
| G6O62_RS24840 (45121) | 45121..45342 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| G6O62_RS24845 (45343) | 45343..46026 | - | 684 | WP_000086127.1 | DNA methylase | - |
| G6O62_RS24850 (46102) | 46102..46413 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| G6O62_RS24855 (46417) | 46417..46839 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| G6O62_RS24860 (46842) | 46842..47822 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| G6O62_RS24865 (48160) | 48160..48495 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| G6O62_RS24870 (48500) | 48500..48586 | - | 87 | Protein_55 | hypothetical protein | - |
| G6O62_RS24875 (48590) | 48590..49492 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| G6O62_RS24880 (49910) | 49910..50158 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| G6O62_RS24885 (50155) | 50155..50592 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G6O62_RS24890 (50592) | 50592..51863 | + | 1272 | WP_032291125.1 | Y-family DNA polymerase | - |
| G6O62_RS24895 (52075) | 52075..52701 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| G6O62_RS24900 (52698) | 52698..53000 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| G6O62_RS24905 (53551) | 53551..54897 | - | 1347 | WP_001132021.1 | protein YagA | - |
| G6O62_RS24910 (55250) | 55250..55852 | + | 603 | WP_032291854.1 | ProQ/FINO family protein | - |
| G6O62_RS24915 (55908) | 55908..56417 | + | 510 | WP_032291091.1 | hypothetical protein | - |
| G6O62_RS24920 (56733) | 56733..57188 | - | 456 | Protein_65 | 3'-5' exonuclease | - |
| G6O62_RS24925 (57179) | 57179..57352 | + | 174 | Protein_66 | IS6 family transposase IS15DI | Transposase |
| G6O62_RS24930 (57404) | 57404..57553 | + | 150 | Protein_67 | cupin fold metalloprotein, WbuC family | - |
| G6O62_RS24935 (57600) | 57600..58475 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| G6O62_RS24940 (58731) | 58731..59048 | - | 318 | Protein_69 | IS1380 family transposase ISEcp1 | Transposase |
| G6O62_RS24945 (59040) | 59040..59297 | - | 258 | Protein_70 | IS1380 family transposase ISEcp1 | Transposase |
| G6O62_RS24950 (59297) | 59297..59566 | - | 270 | WP_032291093.1 | type II toxin-antitoxin system antitoxin YacA | - |
| G6O62_RS24955 (60477) | 60477..61508 | - | 1032 | WP_000907866.1 | plasmid replication initiator RepA | - |
| G6O62_RS24960 (62466) | 62466..62624 | + | 159 | Protein_73 | ash family protein | - |
| G6O62_RS24965 (62662) | 62662..62949 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| G6O62_RS24970 (63391) | 63391..63924 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| G6O62_RS24975 (64178) | 64178..64861 | + | 684 | WP_023196143.1 | conjugal transfer protein TraC | - |
| G6O62_RS24980 (65033) | 65033..65287 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| G6O62_RS24985 (65548) | 65548..65814 | + | 267 | WP_001545761.1 | hypothetical protein | - |
| G6O62_RS24990 (66786) | 66786..67853 | + | 1068 | WP_001545759.1 | hypothetical protein | VF |
| G6O62_RS24995 (67853) | 67853..68290 | + | 438 | WP_001545758.1 | hypothetical protein | VF |
| G6O62_RS25000 (68304) | 68304..69986 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| G6O62_RS25005 (69979) | 69979..71274 | + | 1296 | WP_016245572.1 | type 4b pilus protein PilO2 | - |
| G6O62_RS25010 (71261) | 71261..71713 | + | 453 | WP_001247333.1 | hypothetical protein | VF |
| G6O62_RS25015 (71724) | 71724..73277 | + | 1554 | WP_001545756.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| G6O62_RS25020 (73290) | 73290..74375 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G6O62_RS25025 (74392) | 74392..75006 | + | 615 | WP_000908227.1 | hypothetical protein | VF |
| G6O62_RS25030 (75016) | 75016..75576 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| G6O62_RS25035 (75561) | 75561..76217 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| G6O62_RS25040 (76205) | 76205..77641 | + | 1437 | WP_000527428.1 | hypothetical protein | VF |
| G6O62_RS25045 (78923) | 78923..79276 | - | 354 | WP_001393368.1 | hypothetical protein | - |
| G6O62_RS25050 (79275) | 79275..80429 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| G6O62_RS25055 (80580) | 80580..81404 | + | 825 | WP_001545755.1 | conjugal transfer protein TraE | - |
| G6O62_RS25060 (81490) | 81490..82692 | + | 1203 | WP_171776325.1 | conjugal transfer protein TraF | - |
| G6O62_RS25065 (82752) | 82752..83336 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| G6O62_RS25070 (83731) | 83731..84189 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| G6O62_RS25075 (84186) | 84186..85004 | + | 819 | WP_097763371.1 | hypothetical protein | VF |
| G6O62_RS25080 (85001) | 85001..86134 | + | 1134 | Protein_97 | plasmid transfer ATPase TraJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|