MGE detailed information
MGE type: Genomic_island MGE length: 12985 bp
Accession: NZ_CP049173 Location: 2616213..2629197 Organism: Shigella sonnei strain 19.0820.1561 Replicon: chromosome
Accession: NZ_CP049173 Location: 2616213..2629197 Organism: Shigella sonnei strain 19.0820.1561 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O61_RS13440 (2611371) | 2611371..2612426 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| G6O61_RS13445 (2612497) | 2612497..2613282 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| G6O61_RS13450 (2613254) | 2613254..2614966 | + | 1713 | Protein_2628 | flagellar biosynthesis protein FlhA | - |
| G6O61_RS13455 (2615089) | 2615089..2615586 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| G6O61_RS13460 (2615657) | 2615657..2615785 | - | 129 | Protein_2630 | ISAs1 family transposase | - |
| G6O61_RS13465 (2615840) | 2615840..2616537 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O61_RS13470 (2616826) | 2616826..2617609 | - | 784 | Protein_2632 | Murein DD-endopeptidase MepH | VF |
| G6O61_RS13475 (2617795) | 2617795..2618055 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| G6O61_RS13480 (2618058) | 2618058..2618336 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| G6O61_RS13485 (2618492) | 2618492..2619232 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| G6O61_RS13490 (2619203) | 2619203..2619970 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| G6O61_RS13495 (2620176) | 2620176..2620754 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| G6O61_RS13500 (2620994) | 2620994..2623438 | + | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| G6O61_RS13505 (2623481) | 2623481..2623927 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| G6O61_RS13510 (2624108) | 2624108..2624878 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| G6O61_RS13515 (2624920) | 2624920..2626056 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| G6O61_RS13520 (2626525) | 2626525..2626902 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| G6O61_RS13525 (2626902) | 2626902..2627312 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| G6O61_RS13530 (2627350) | 2627350..2628486 | - | 1137 | Protein_2644 | ISAs1 family transposase ISEc1 | Transposase |
| G6O61_RS13535 (2628748) | 2628748..2629197 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| G6O61_RS13540 (2629209) | 2629209..2633418 | - | 4210 | Protein_2646 | DUF6531 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|