MGE detailed information
MGE type: Prophage MGE length: 20820 bp
Accession: NZ_CP049173 Location: 1560062..1580881 Organism: Shigella sonnei strain 19.0820.1561 Replicon: chromosome
Accession: NZ_CP049173 Location: 1560062..1580881 Organism: Shigella sonnei strain 19.0820.1561 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O61_RS08100 () | 1557195..1558634 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G6O61_RS08105 () | 1558752..1558835 | + | 84 | Protein_1584 | DUF1480 family protein | - |
| G6O61_RS08115 () | 1559607..1559765 | + | 159 | Protein_1586 | YebV family protein | - |
| G6O61_RS08120 () | 1559870..1560061 | + | 192 | WP_001296140.1 | YebW family protein | - |
| G6O61_RS08125 () | 1560062..1560262 | - | 201 | Protein_1588 | serine/threonine-protein phosphatase | - |
| G6O61_RS08135 () | 1561518..1561823 | - | 306 | Protein_1590 | serine/threonine-protein phosphatase | - |
| G6O61_RS08140 () | 1561878..1562575 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O61_RS08145 () | 1562589..1562762 | - | 174 | Protein_1592 | metallophosphoesterase | - |
| G6O61_RS08150 () | 1563413..1564568 | + | 1156 | Protein_1593 | IS3 family transposase ISSd1 | Transposase |
| G6O61_RS08155 () | 1564770..1566484 | + | 1715 | Protein_1594 | Sodium-dependent dicarboxylate transporter SdcS | VF |
| G6O61_RS08165 () | 1567901..1568161 | + | 261 | WP_077447296.1 | excisionase | - |
| G6O61_RS08170 () | 1568190..1568647 | + | 458 | Protein_1597 | IS1-like element IS1A family transposase | - |
| G6O61_RS08175 () | 1568934..1570465 | + | 1532 | Protein_1598 | IS21 family transposase ISSso4 | Transposase |
| G6O61_RS08180 () | 1570482..1571237 | + | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| G6O61_RS08185 () | 1571379..1572607 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| G6O61_RS08190 () | 1572618..1572863 | + | 246 | Protein_1601 | IS1 family transposase IS1R | Transposase |
| G6O61_RS08195 () | 1572900..1573976 | + | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| - | 1574107..1574341 | + | 235 | - | - | Antitoxin Detail |
| - | 1574108..1574211 | - | 104 | - | - | Toxin Detail |
| G6O61_RS08200 () | 1574369..1574710 | - | 342 | WP_000976476.1 | YebY family protein | - |
| G6O61_RS08205 () | 1574723..1575595 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| G6O61_RS08210 () | 1575599..1575973 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| G6O61_RS08215 () | 1576112..1576342 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G6O61_RS08220 () | 1576444..1577100 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| G6O61_RS08225 () | 1577124..1577786 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G6O61_RS08230 () | 1577783..1579843 | - | 2061 | WP_000936913.1 | oligopeptidase B | - |
| G6O61_RS08235 () | 1580052..1580711 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| G6O61_RS08240 () | 1581038..1581394 | - | 357 | WP_001295500.1 | protein YebF | - |
| G6O61_RS08245 () | 1581461..1581751 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G6O61_RS08250 () | 1581885..1583063 | + | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G6O61_RS08255 () | 1583119..1583760 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G6O61_RS08260 () | 1583797..1585608 | - | 1812 | WP_001069438.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|