MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP049167 Location: 4434256..4447230 Organism: Shigella sonnei strain 09163633 Replicon: chromosome
Accession: NZ_CP049167 Location: 4434256..4447230 Organism: Shigella sonnei strain 09163633 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O57_RS22450 (4429414) | 4429414..4430469 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| G6O57_RS22455 (4430540) | 4430540..4431325 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| G6O57_RS22460 (4431297) | 4431297..4433009 | + | 1713 | Protein_4384 | flagellar biosynthesis protein FlhA | - |
| G6O57_RS22465 (4433132) | 4433132..4433629 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| G6O57_RS22470 (4433700) | 4433700..4433828 | - | 129 | Protein_4386 | ISAs1 family transposase | - |
| G6O57_RS22475 (4433883) | 4433883..4434580 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O57_RS22480 (4434869) | 4434869..4435642 | - | 774 | WP_127148796.1 | hypothetical protein | VF |
| G6O57_RS22485 (4435828) | 4435828..4436088 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| G6O57_RS22490 (4436091) | 4436091..4436369 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| G6O57_RS22495 (4436525) | 4436525..4437265 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| G6O57_RS22500 (4437236) | 4437236..4438003 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| G6O57_RS22505 (4438209) | 4438209..4438787 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| G6O57_RS22510 (4439027) | 4439027..4441471 | + | 2445 | WP_000973074.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| G6O57_RS22515 (4441514) | 4441514..4441960 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| G6O57_RS22520 (4442141) | 4442141..4442911 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| G6O57_RS22525 (4442953) | 4442953..4444089 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| G6O57_RS22530 (4444558) | 4444558..4444935 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| G6O57_RS22535 (4444935) | 4444935..4445345 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| G6O57_RS22540 (4445383) | 4445383..4446519 | - | 1137 | Protein_4400 | ISAs1 family transposase ISEc1 | Transposase |
| G6O57_RS22545 (4446781) | 4446781..4447230 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| G6O57_RS22550 (4447242) | 4447242..4451450 | - | 4209 | WP_000508696.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|