MGE detailed information
MGE type: Prophage MGE length: 26686 bp
Accession: NZ_CP049167 Location: 2975483..3002168 Organism: Shigella sonnei strain 09163633 Replicon: chromosome
Accession: NZ_CP049167 Location: 2975483..3002168 Organism: Shigella sonnei strain 09163633 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O57_RS14950 (2971589) | 2971589..2972350 | - | 762 | WP_000060491.1 | acid stress response transcriptional regulator YdeO | - |
| G6O57_RS14955 (2972425) | 2972425..2972622 | - | 198 | WP_000271372.1 | two-component system connector SafA | - |
| G6O57_RS14960 (2972870) | 2972870..2975149 | - | 2280 | WP_000726664.1 | acid resistance putative oxidoreductase YdeP | - |
| G6O57_RS14965 (2975483) | 2975483..2976397 | - | 915 | WP_000520682.1 | hypothetical protein | VF |
| G6O57_RS14970 (2976501) | 2976501..2976656 | - | 156 | Protein_2912 | type 1 fimbrial protein | - |
| G6O57_RS14975 (2976668) | 2976668..2976931 | - | 264 | Protein_2913 | integrase core domain-containing protein | - |
| G6O57_RS14980 (2976985) | 2976985..2977783 | - | 799 | Protein_2914 | IS21 family transposase IS21 | Transposase |
| G6O57_RS14985 (2977783) | 2977783..2978954 | - | 1172 | Protein_2915 | IS21 family transposase IS21 | Transposase |
| G6O57_RS14990 (2979056) | 2979056..2979666 | - | 611 | Protein_2916 | IS3 family transposase IS2 | Transposase |
| G6O57_RS14995 (2980109) | 2980109..2981362 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| G6O57_RS15000 (2981469) | 2981469..2982362 | + | 894 | WP_001019531.1 | HTH-type transcriptional regulator HdfR | VF |
| G6O57_RS15005 (2982497) | 2982497..2983717 | + | 1221 | WP_000225252.1 | DNA-binding transcriptional repressor Mlc | - |
| G6O57_RS15010 (2983842) | 2983842..2984537 | + | 696 | WP_000893462.1 | dethiobiotin synthase | - |
| G6O57_RS15015 (2984490) | 2984490..2985782 | - | 1293 | WP_071787903.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G6O57_RS15020 (2985941) | 2985941..2986555 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| G6O57_RS15025 (2986598) | 2986598..2987452 | - | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| G6O57_RS15030 (2987454) | 2987454..2988071 | - | 618 | WP_171797005.1 | dimethylsulfoxide reductase subunit B | - |
| G6O57_RS15035 (2988082) | 2988082..2989158 | - | 1077 | Protein_2925 | molybdopterin dinucleotide binding domain-containing protein | - |
| G6O57_RS15040 (2989216) | 2989216..2989913 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O57_RS15045 (2989907) | 2989907..2990695 | - | 789 | Protein_2927 | Rha family transcriptional regulator | - |
| G6O57_RS15050 (2991228) | 2991228..2991925 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6O57_RS15055 (2992073) | 2992073..2992438 | - | 366 | WP_024174355.1 | hypothetical protein | - |
| G6O57_RS15060 (2992450) | 2992450..2992602 | - | 153 | WP_000379558.1 | DUF1391 family protein | - |
| G6O57_RS15065 (2992882) | 2992882..2993172 | - | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6O57_RS15070 (2993172) | 2993172..2993366 | - | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| G6O57_RS15075 (2993386) | 2993386..2993916 | - | 531 | WP_252900167.1 | helix-turn-helix domain-containing protein | - |
| G6O57_RS15080 (2993998) | 2993998..2994261 | + | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| G6O57_RS15085 (2994258) | 2994258..2994683 | + | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| G6O57_RS15090 (2994755) | 2994755..2995819 | + | 1065 | WP_001262380.1 | hypothetical protein | - |
| G6O57_RS15095 (2995826) | 2995826..2996572 | + | 747 | WP_000788740.1 | ATP-binding protein | - |
| G6O57_RS15100 (2996594) | 2996594..2997319 | + | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| G6O57_RS15105 (2997335) | 2997335..2997757 | + | 423 | WP_001151171.1 | DUF977 family protein | - |
| G6O57_RS15110 (2997815) | 2997815..2998171 | + | 357 | WP_005140877.1 | hypothetical protein | - |
| G6O57_RS15115 (2998386) | 2998386..3000218 | + | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| G6O57_RS15120 (3000215) | 3000215..3001297 | + | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| G6O57_RS15125 (3001505) | 3001505..3002202 | + | 698 | WP_254000375.1 | IS1-like element IS1A family transposase | - |
| G6O57_RS15130 (3002266) | 3002266..3003726 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| G6O57_RS15135 (3003762) | 3003762..3003965 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G6O57_RS15140 (3004142) | 3004142..3004828 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G6O57_RS15145 (3004917) | 3004917..3005663 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|