MGE detailed information
MGE type: Genomic_island MGE length: 42452 bp
Accession: NZ_CP049140 Location: 4439368..4481819 Organism: Pseudomonas nitroreducens strain HBP1 Replicon: chromosome
Accession: NZ_CP049140 Location: 4439368..4481819 Organism: Pseudomonas nitroreducens strain HBP1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5B91_RS21170 () | 4434709..4435656 | + | 948 | WP_023108457.1 | TIGR03756 family integrating conjugative element protein | - |
| G5B91_RS21175 () | 4435666..4437060 | + | 1395 | WP_009518521.1 | integrating conjugative element protein | - |
| G5B91_RS21180 () | 4437057..4437416 | + | 360 | WP_009518522.1 | hypothetical protein | - |
| G5B91_RS21185 () | 4437431..4438948 | + | 1518 | WP_011804664.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| G5B91_RS21190 () | 4438964..4439341 | - | 378 | WP_011804663.1 | DUF3742 family protein | - |
| G5B91_RS21195 () | 4439368..4439826 | - | 459 | WP_011804662.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| G5B91_RS21200 () | 4439826..4440143 | - | 318 | WP_024766752.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| G5B91_RS21205 () | 4440449..4442293 | + | 1845 | WP_009876620.1 | TraI domain-containing protein | - |
| G5B91_RS21210 () | 4442374..4445025 | - | 2652 | WP_020924950.1 | UvrABC system protein A | VF |
| G5B91_RS21215 () | 4445051..4446916 | - | 1866 | WP_011871462.1 | Na+/H+ antiporter NhaA | - |
| G5B91_RS21220 () | 4446971..4448284 | - | 1314 | WP_023106336.1 | replication-associated recombination protein A | - |
| G5B91_RS21225 () | 4448336..4449643 | - | 1308 | WP_011871464.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| G5B91_RS21230 () | 4449660..4450490 | - | 831 | WP_011871465.1 | S-formylglutathione hydrolase | - |
| G5B91_RS21235 () | 4450549..4451883 | - | 1335 | WP_023106334.1 | DUF3422 family protein | - |
| G5B91_RS21240 () | 4452066..4452464 | - | 399 | WP_017514589.1 | VOC family protein | - |
| G5B91_RS21245 () | 4452508..4453617 | - | 1110 | WP_007182549.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| G5B91_RS21255 () | 4453882..4455104 | + | 1223 | WP_200890662.1 | IS3 family transposase ISRso10 | Transposase |
| G5B91_RS21260 () | 4455141..4455287 | - | 147 | Protein_4205 | metal-sensing transcriptional repressor | - |
| G5B91_RS21265 () | 4455570..4456460 | - | 891 | WP_007182547.1 | carbon-nitrogen hydrolase family protein | - |
| G5B91_RS21270 () | 4456457..4457065 | - | 609 | WP_007182546.1 | N-acetyltransferase | - |
| G5B91_RS21275 () | 4457067..4457474 | - | 408 | WP_017514126.1 | nuclear transport factor 2 family protein | - |
| G5B91_RS21280 () | 4457629..4458534 | + | 906 | WP_020924945.1 | LysR family transcriptional regulator | - |
| G5B91_RS21285 () | 4458685..4460661 | - | 1977 | WP_020924944.1 | excinuclease ABC subunit UvrB | - |
| G5B91_RS21290 () | 4461155..4462426 | + | 1272 | WP_020924943.1 | IS4 family transposase ISPa45 | Transposase |
| G5B91_RS21295 () | 4462684..4463115 | - | 432 | WP_023835768.1 | DUF488 domain-containing protein | - |
| G5B91_RS21300 () | 4463600..4464541 | + | 942 | WP_028698648.1 | LysR family transcriptional regulator | - |
| G5B91_RS21305 () | 4465008..4466222 | + | 1215 | WP_023093406.1 | glutathione-independent formaldehyde dehydrogenase | - |
| G5B91_RS21310 () | 4466706..4467596 | + | 891 | WP_023103878.1 | LysR family transcriptional regulator | - |
| G5B91_RS21315 () | 4467619..4467912 | - | 294 | WP_009459591.1 | helix-turn-helix domain-containing protein | - |
| G5B91_RS21320 () | 4468032..4468685 | + | 654 | WP_023106332.1 | substrate-binding domain-containing protein | - |
| G5B91_RS21325 () | 4468804..4469772 | + | 969 | WP_020924940.1 | Dyp-type peroxidase | - |
| G5B91_RS21330 () | 4469810..4471753 | - | 1944 | WP_009876631.1 | Prophage integrase IntS ; Integrase | Integrase |
| G5B91_RS21355 () | 4472659..4473429 | + | 771 | WP_024766963.1 | hypothetical protein | - |
| G5B91_RS21360 () | 4473478..4474140 | + | 663 | WP_024766962.1 | glutathione S-transferase family protein | - |
| G5B91_RS21365 () | 4474197..4474679 | - | 483 | WP_024766961.1 | GAF domain-containing protein | - |
| G5B91_RS21370 () | 4474676..4475572 | - | 897 | WP_024766960.1 | ATP-binding protein | - |
| G5B91_RS21375 () | 4475711..4478032 | + | 2322 | WP_128082592.1 | response regulator | - |
| G5B91_RS21380 () | 4478034..4478504 | - | 471 | WP_024766958.1 | MarR family transcriptional regulator | - |
| G5B91_RS21385 () | 4478504..4478986 | - | 483 | WP_024766957.1 | glutathione peroxidase | - |
| G5B91_RS21390 () | 4479066..4480004 | - | 939 | WP_128082591.1 | tetratricopeptide repeat protein | - |
| G5B91_RS21395 () | 4480434..4481819 | - | 1386 | WP_082032843.1 | Serralysin C | VF |
| G5B91_RS21400 () | 4482287..4482682 | - | 396 | WP_024766956.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| G5B91_RS21405 () | 4482974..4484185 | + | 1212 | WP_024766955.1 | pyridoxal phosphate-dependent aminotransferase | - |
| G5B91_RS21410 () | 4484204..4484644 | + | 441 | WP_038803800.1 | hypothetical protein | - |
| G5B91_RS21415 () | 4484815..4485690 | + | 876 | WP_024766954.1 | protease HtpX | - |
| G5B91_RS21420 () | 4485747..4486403 | - | 657 | WP_024766953.1 | thiopurine S-methyltransferase | - |
| G5B91_RS21425 () | 4486415..4486609 | - | 195 | WP_024766952.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|