MGE detailed information
MGE type: Prophage MGE length: 18864 bp
Accession: NZ_CP049112 Location: 3498305..3517168 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Accession: NZ_CP049112 Location: 3498305..3517168 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6R06_RS17075 (3493405) | 3493405..3494102 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| G6R06_RS17080 (3494111) | 3494111..3494203 | + | 93 | Protein_3336 | sigma factor-binding protein Crl | - |
| G6R06_RS17085 (3494242) | 3494242..3495297 | - | 1056 | WP_103119219.1 | phosphoporin PhoE | - |
| G6R06_RS17090 (3495585) | 3495585..3496688 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| G6R06_RS17095 (3496700) | 3496700..3497953 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| G6R06_RS17105 (3498525) | 3498525..3498866 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| G6R06_RS17110 (3498887) | 3498887..3499204 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| G6R06_RS17115 (3499223) | 3499223..3499444 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| G6R06_RS17120 (3499453) | 3499453..3499929 | - | 477 | WP_000811693.1 | RadC family protein | - |
| G6R06_RS17125 (3499945) | 3499945..3500403 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| G6R06_RS17130 (3500501) | 3500501..3500740 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| G6R06_RS17135 (3500817) | 3500817..3501284 | - | 468 | WP_001547765.1 | protein YkfB | - |
| G6R06_RS17140 (3501307) | 3501307..3501750 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| G6R06_RS17145 (3501750) | 3501750..3501977 | - | 228 | WP_001548158.1 | protein YpjK | - |
| G6R06_RS17150 (3501973) | 3501973..3502164 | - | 192 | Protein_3349 | DeoR family transcriptional regulator | - |
| G6R06_RS17155 (3502381) | 3502381..3503202 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| G6R06_RS17160 (3503294) | 3503294..3504157 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| G6R06_RS17165 (3504486) | 3504486..3505379 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| G6R06_RS17170 (3505475) | 3505475..3505732 | + | 258 | Protein_3353 | IS3 family transposase ISEc52 | Transposase |
| G6R06_RS17175 (3505800) | 3505800..3506951 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| G6R06_RS17180 (3506961) | 3506961..3507386 | + | 426 | Protein_3355 | IS3 family transposase | - |
| G6R06_RS17185 (3508059) | 3508059..3509150 | + | 1092 | Protein_3356 | reverse transcriptase domain-containing protein | - |
| G6R06_RS17190 (3509298) | 3509298..3510278 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| G6R06_RS17195 (3510522) | 3510522..3511925 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| G6R06_RS17200 (3511912) | 3511912..3512844 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| G6R06_RS17205 (3512953) | 3512953..3513999 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| G6R06_RS17210 (3514011) | 3514011..3514358 | - | 348 | Protein_3361 | ABC transporter permease subunit | - |
| G6R06_RS17220 (3515128) | 3515128..3515301 | + | 174 | Protein_3363 | IS30 family transposase | - |
| G6R06_RS17225 (3515311) | 3515311..3515559 | - | 249 | Protein_3364 | IS3 family transposase ISEhe3 | Transposase |
| G6R06_RS17230 (3515582) | 3515582..3515932 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| G6R06_RS17235 (3515946) | 3515946..3516011 | - | 66 | Protein_3366 | hypothetical protein | - |
| G6R06_RS17240 (3516026) | 3516026..3517180 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| G6R06_RS17245 (3517475) | 3517475..3518383 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| G6R06_RS17250 (3518398) | 3518398..3520365 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| G6R06_RS17255 (3520592) | 3520592..3521974 | + | 1383 | WP_000192863.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|