MGE detailed information
MGE type: Prophage MGE length: 42716 bp
Accession: NZ_CP049112 Location: 2227437..2270152 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Accession: NZ_CP049112 Location: 2227437..2270152 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6R06_RS10775 (2223686) | 2223686..2226112 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| G6R06_RS10780 (2226311) | 2226311..2226616 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| G6R06_RS10785 (2226724) | 2226724..2227434 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| G6R06_RS10790 (2227437) | 2227437..2227997 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| G6R06_RS10795 (2228032) | 2228032..2228373 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| G6R06_RS10800 (2228508) | 2228508..2228834 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| G6R06_RS10805 (2229040) | 2229040..2230254 | + | 1215 | WP_103119130.1 | starvation-sensing protein RspA | - |
| G6R06_RS10810 (2230266) | 2230266..2231285 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| G6R06_RS10815 (2231473) | 2231473..2232630 | - | 1158 | Protein_2111 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G6R06_RS10820 (2232644) | 2232644..2233339 | - | 696 | Protein_2112 | IS3 family transposase IS2 | Transposase |
| G6R06_RS10825 (2233336) | 2233336..2234103 | - | 768 | Protein_2113 | exonuclease | - |
| G6R06_RS10830 (2234196) | 2234196..2234387 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| G6R06_RS10835 (2234384) | 2234384..2234572 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G6R06_RS10840 (2235140) | 2235140..2235358 | - | 219 | WP_001171942.1 | protein YdfC | - |
| G6R06_RS10845 (2235388) | 2235388..2235516 | - | 129 | WP_000344964.1 | protein YdfB | - |
| G6R06_RS10850 (2235518) | 2235518..2235673 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| G6R06_RS10855 (2235840) | 2235840..2236247 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| G6R06_RS10860 (2236331) | 2236331..2236561 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| G6R06_RS10865 (2236545) | 2236545..2236823 | + | 279 | Protein_2121 | protein YdfX | - |
| G6R06_RS10870 (2236858) | 2236858..2237007 | + | 150 | WP_011443592.1 | protein YdfW | - |
| G6R06_RS10875 (2237443) | 2237443..2237775 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| G6R06_RS10880 (2237978) | 2237978..2238283 | - | 306 | WP_001326990.1 | protein YdfV | - |
| G6R06_RS10885 (2238308) | 2238308..2238547 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G6R06_RS10890 (2238547) | 2238547..2238834 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G6R06_RS10895 (2238906) | 2238906..2239061 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G6R06_RS10900 (2239278) | 2239278..2239529 | + | 252 | WP_000980994.1 | protein Rem | - |
| G6R06_RS10905 (2239596) | 2239596..2239874 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| G6R06_RS10910 (2239876) | 2239876..2240925 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| G6R06_RS10915 (2240939) | 2240939..2241691 | + | 753 | WP_001047135.1 | antitermination protein | - |
| G6R06_RS10920 (2241969) | 2241969..2242058 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| G6R06_RS10925 (2242113) | 2242113..2242325 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| G6R06_RS10930 (2242626) | 2242626..2242841 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| G6R06_RS10935 (2243205) | 2243205..2243375 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| G6R06_RS10940 (2243595) | 2243595..2243810 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| G6R06_RS10945 (2243815) | 2243815..2244126 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| G6R06_RS10950 (2244123) | 2244123..2244656 | + | 534 | WP_001092971.1 | lysozyme | - |
| G6R06_RS10955 (2244653) | 2244653..2245150 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| G6R06_RS10960 (2245513) | 2245513..2245725 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G6R06_RS10965 (2245736) | 2245736..2245924 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G6R06_RS10970 (2245927) | 2245927..2245992 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| G6R06_RS10975 (2246071) | 2246071..2246226 | + | 156 | WP_001309517.1 | protein YnfN | - |
| G6R06_RS10980 (2246398) | 2246398..2246571 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G6R06_RS10985 (2246723) | 2246723..2247133 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| G6R06_RS10990 (2247191) | 2247191..2247424 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G6R06_RS10995 (2247813) | 2247813..2248382 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| G6R06_RS11000 (2248333) | 2248333..2249295 | + | 963 | WP_278147326.1 | phage tail protein | - |
| G6R06_RS11005 (2249295) | 2249295..2249870 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| G6R06_RS11010 (2249968) | 2249968..2250558 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| G6R06_RS11015 (2250875) | 2250875..2251108 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G6R06_RS11020 (2251177) | 2251177..2251290 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| G6R06_RS11025 (2251811) | 2251811..2253178 | + | 1368 | Protein_2153 | MHS family MFS transporter | - |
| G6R06_RS11030 (2253267) | 2253267..2254727 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| G6R06_RS11035 (2254762) | 2254762..2254965 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G6R06_RS11040 (2255142) | 2255142..2255828 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G6R06_RS11045 (2255917) | 2255917..2256663 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| G6R06_RS11050 (2256800) | 2256800..2258845 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| G6R06_RS11055 (2258889) | 2258889..2259407 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| G6R06_RS11060 (2259683) | 2259683..2260075 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| G6R06_RS11065 (2260330) | 2260330..2261220 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| G6R06_RS11070 (2261335) | 2261335..2261439 | - | 105 | WP_211180496.1 | protein MgtT | - |
| G6R06_RS11075 (2261439) | 2261439..2261534 | - | 96 | WP_000901367.1 | protein MgtS | - |
| G6R06_RS11080 (2261661) | 2261661..2262848 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| G6R06_RS11085 (2263043) | 2263043..2263942 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| G6R06_RS11090 (2263973) | 2263973..2264191 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| G6R06_RS11095 (2264223) | 2264223..2264606 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| G6R06_RS11100 (2264626) | 2264626..2265060 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| G6R06_RS11105 (2265272) | 2265272..2265937 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| G6R06_RS11110 (2265962) | 2265962..2267152 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| G6R06_RS11120 (2268174) | 2268174..2269193 | - | 1020 | Protein_2172 | putative protein YneK | - |
| G6R06_RS11125 (2269271) | 2269271..2270152 | - | 882 | WP_000366501.1 | HTH-type transcriptional regulator HdfR | VF |
| G6R06_RS11130 (2270253) | 2270253..2271641 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| G6R06_RS11135 (2271705) | 2271705..2272631 | + | 927 | WP_000257409.1 | glutaminase B | - |
| G6R06_RS11140 (2272631) | 2272631..2272990 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| G6R06_RS11145 (2273063) | 2273063..2274049 | + | 987 | Protein_2177 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|