MGE detailed information
MGE type: Prophage MGE length: 54848 bp
Accession: NZ_CP049110 Location: 3915464..3970311 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Accession: NZ_CP049110 Location: 3915464..3970311 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5631_RS19140 (3913068) | 3913068..3913793 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| G5631_RS19145 (3913830) | 3913830..3914369 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| G5631_RS19150 (3914434) | 3914434..3914982 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| G5631_RS19155 (3915464) | 3915464..3916018 | - | 555 | WP_000983104.1 | hypothetical protein | VF |
| G5631_RS19165 (3917314) | 3917314..3917916 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| G5631_RS19170 (3919372) | 3919372..3920088 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G5631_RS19175 (3920108) | 3920108..3921214 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| G5631_RS19180 (3921279) | 3921279..3922259 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G5631_RS19185 (3922369) | 3922369..3922574 | + | 206 | Protein_3746 | HNH endonuclease | - |
| G5631_RS19190 (3922842) | 3922842..3924082 | - | 1241 | Protein_3747 | helicase YjhR | - |
| G5631_RS19195 (3924198) | 3924198..3924329 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| G5631_RS19200 (3924820) | 3924820..3925077 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| G5631_RS19205 (3925089) | 3925089..3925634 | + | 546 | WP_103119170.1 | N-acetyltransferase | Antitoxin Detail |
| G5631_RS19210 (3925690) | 3925690..3926436 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G5631_RS19215 (3926605) | 3926605..3926823 | + | 219 | Protein_3752 | hypothetical protein | - |
| G5631_RS19220 (3926861) | 3926861..3926977 | + | 117 | Protein_3753 | VOC family protein | - |
| G5631_RS19225 (3927222) | 3927222..3928343 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G5631_RS19230 (3928340) | 3928340..3928618 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| G5631_RS19235 (3928630) | 3928630..3929943 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| G5631_RS19240 (3929956) | 3929956..3930762 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| G5631_RS19245 (3930893) | 3930893..3931324 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| G5631_RS19250 (3931336) | 3931336..3931968 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| G5631_RS19255 (3931985) | 3931985..3932767 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| G5631_RS19260 (3933070) | 3933070..3933858 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| G5631_RS19265 (3933863) | 3933863..3934768 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| G5631_RS19270 (3934779) | 3934779..3936746 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| G5631_RS19275 (3936853) | 3936853..3938202 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| G5631_RS19280 (3938548) | 3938548..3939534 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| G5631_RS19285 (3939648) | 3939648..3940345 | - | 698 | Protein_3766 | IS1-like element IS1F family transposase | - |
| G5631_RS19290 (3940432) | 3940432..3940500 | - | 69 | WP_211180522.1 | protein YkiE | - |
| G5631_RS19295 (3940637) | 3940637..3941158 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| G5631_RS19300 (3941155) | 3941155..3942108 | + | 954 | WP_103119169.1 | ferric citrate uptake sigma factor regulator FecR | - |
| G5631_RS19305 (3942195) | 3942195..3944519 | + | 2325 | WP_278147178.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| G5631_RS19310 (3944564) | 3944564..3945466 | + | 903 | WP_000879155.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| G5631_RS19315 (3945463) | 3945463..3946460 | + | 998 | Protein_3772 | hypothetical protein | VF |
| G5631_RS19320 (3946457) | 3946457..3947413 | + | 957 | WP_000684852.1 | hypothetical protein | VF |
| G5631_RS19325 (3947414) | 3947414..3948181 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| G5631_RS19330 (3948738) | 3948738..3948995 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| G5631_RS19335 (3949078) | 3949078..3949862 | - | 785 | Protein_3776 | IS3 family transposase ISEc52 | Transposase |
| G5631_RS19340 (3949929) | 3949929..3950189 | + | 261 | Protein_3777 | IS3 family transposase ISSfl10 | Transposase |
| G5631_RS19345 (3950171) | 3950171..3950257 | + | 87 | Protein_3778 | IS3 family transposase ISSfl10 | Transposase |
| G5631_RS19350 (3950254) | 3950254..3951405 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| G5631_RS19355 (3951417) | 3951417..3951674 | - | 258 | Protein_3780 | IS3 family transposase IS911 | Transposase |
| G5631_RS19360 (3951762) | 3951762..3951965 | - | 204 | WP_000355616.1 | MFS transporter | - |
| G5631_RS19365 (3951988) | 3951988..3952245 | + | 258 | WP_000254999.1 | surface-adhesin E family protein | - |
| G5631_RS19370 (3952298) | 3952298..3952423 | - | 126 | WP_000594405.1 | protein YthA | - |
| G5631_RS19375 (3952466) | 3952466..3953584 | - | 1119 | WP_000611568.1 | 2,7-anhydro-N-acetylneuraminate hydratase | - |
| G5631_RS19380 (3953596) | 3953596..3954813 | - | 1218 | WP_000179691.1 | MFS transporter | - |
| G5631_RS19385 (3955422) | 3955422..3956768 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| G5631_RS19390 (3956796) | 3956796..3956939 | - | 144 | WP_000050905.1 | hypothetical protein | - |
| G5631_RS19395 (3957282) | 3957282..3957511 | - | 230 | Protein_3788 | transposase domain-containing protein | - |
| G5631_RS19400 (3958098) | 3958098..3959278 | + | 1181 | Protein_3789 | phosphoethanolamine transferase | - |
| G5631_RS19410 (3960931) | 3960931..3962139 | - | 1209 | WP_223293345.1 | hypothetical protein ; Integrase | Integrase |
| G5631_RS19420 (3962662) | 3962662..3963681 | + | 1020 | WP_001309160.1 | NADPH-dependent aldehyde reductase Ahr | - |
| G5631_RS19425 (3963685) | 3963685..3964249 | - | 565 | Protein_3793 | gluconokinase | - |
| G5631_RS19430 (3964466) | 3964466..3965497 | + | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| G5631_RS19435 (3965521) | 3965521..3966285 | + | 765 | WP_000998695.1 | hypothetical protein | VF |
| G5631_RS19440 (3966347) | 3966347..3967666 | + | 1320 | WP_001128335.1 | gnt-II system L-idonate transporter | - |
| G5631_RS19445 (3967733) | 3967733..3968731 | + | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| G5631_RS19450 (3968809) | 3968809..3970311 | + | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| G5631_RS19455 (3970472) | 3970472..3971554 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| G5631_RS19460 (3971554) | 3971554..3972654 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| G5631_RS19465 (3972717) | 3972717..3972767 | - | 51 | WP_211180521.1 | protein YtgA | - |
| G5631_RS19470 (3972921) | 3972921..3974432 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| G5631_RS19475 (3974592) | 3974592..3975035 | + | 444 | WP_000786400.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|