MGE detailed information
MGE type: Prophage MGE length: 55566 bp
Accession: NZ_CP049110 Location: 2213477..2269042 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Accession: NZ_CP049110 Location: 2213477..2269042 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5631_RS10695 (2209568) | 2209568..2209933 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| G5631_RS10700 (2209920) | 2209920..2210249 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| G5631_RS10705 (2210288) | 2210288..2211109 | - | 822 | WP_001260865.1 | serine protease | - |
| G5631_RS10710 (2211209) | 2211209..2211292 | - | 84 | WP_000233093.1 | stationary phase-induced protein | - |
| G5631_RS10715 (2211385) | 2211385..2211693 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| G5631_RS10720 (2212117) | 2212117..2213370 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| G5631_RS10725 (2213477) | 2213477..2214370 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| G5631_RS10730 (2214505) | 2214505..2215725 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| G5631_RS10735 (2215850) | 2215850..2216545 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| G5631_RS10740 (2216498) | 2216498..2217790 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G5631_RS10745 (2217949) | 2217949..2218563 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| G5631_RS10750 (2218606) | 2218606..2219460 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| G5631_RS10755 (2219462) | 2219462..2220079 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| G5631_RS10760 (2220090) | 2220090..2222513 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| G5631_RS10765 (2222574) | 2222574..2225000 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| G5631_RS10770 (2225199) | 2225199..2225504 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| G5631_RS10775 (2225612) | 2225612..2226322 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| G5631_RS10780 (2226325) | 2226325..2226885 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| G5631_RS10785 (2226920) | 2226920..2227261 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| G5631_RS10790 (2227396) | 2227396..2227722 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| G5631_RS10795 (2227928) | 2227928..2229142 | + | 1215 | WP_103119130.1 | starvation-sensing protein RspA | - |
| G5631_RS10800 (2229154) | 2229154..2230173 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| G5631_RS10805 (2230361) | 2230361..2231518 | - | 1158 | Protein_2109 | hypothetical protein ; Integrase | Integrase |
| G5631_RS10810 (2231532) | 2231532..2232227 | - | 696 | Protein_2110 | IS3 family transposase IS2 | Transposase |
| G5631_RS10815 (2232224) | 2232224..2232991 | - | 768 | Protein_2111 | exonuclease | - |
| G5631_RS10820 (2233084) | 2233084..2233275 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| G5631_RS10825 (2233272) | 2233272..2233460 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G5631_RS10830 (2234028) | 2234028..2234246 | - | 219 | WP_001171942.1 | protein YdfC | - |
| G5631_RS10835 (2234276) | 2234276..2234404 | - | 129 | WP_000344964.1 | protein YdfB | - |
| G5631_RS10840 (2234406) | 2234406..2234561 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| G5631_RS10845 (2234728) | 2234728..2235135 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| G5631_RS10850 (2235219) | 2235219..2235449 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| G5631_RS10855 (2235433) | 2235433..2235711 | + | 279 | Protein_2119 | protein YdfX | - |
| G5631_RS10860 (2235746) | 2235746..2235895 | + | 150 | WP_011443592.1 | protein YdfW | - |
| G5631_RS10865 (2236331) | 2236331..2236663 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| G5631_RS10870 (2236866) | 2236866..2237171 | - | 306 | WP_001326990.1 | protein YdfV | - |
| G5631_RS10875 (2237196) | 2237196..2237435 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G5631_RS10880 (2237435) | 2237435..2237722 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G5631_RS10885 (2237794) | 2237794..2237949 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G5631_RS10890 (2238166) | 2238166..2238417 | + | 252 | WP_000980994.1 | protein Rem | - |
| G5631_RS10895 (2238484) | 2238484..2238762 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| G5631_RS10900 (2238764) | 2238764..2239813 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| G5631_RS10905 (2239827) | 2239827..2240579 | + | 753 | WP_001047135.1 | antitermination protein | - |
| G5631_RS10910 (2240857) | 2240857..2240946 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| G5631_RS10915 (2241001) | 2241001..2241213 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| G5631_RS10920 (2241514) | 2241514..2241729 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| G5631_RS10925 (2242093) | 2242093..2242263 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| G5631_RS10930 (2242483) | 2242483..2242698 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| G5631_RS10935 (2242703) | 2242703..2243014 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| G5631_RS10940 (2243011) | 2243011..2243544 | + | 534 | WP_001092971.1 | lysozyme | - |
| G5631_RS10945 (2243541) | 2243541..2244038 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| G5631_RS10950 (2244401) | 2244401..2244613 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G5631_RS10955 (2244624) | 2244624..2244812 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G5631_RS10960 (2244815) | 2244815..2244880 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| G5631_RS10965 (2244959) | 2244959..2245114 | + | 156 | WP_001309517.1 | protein YnfN | - |
| G5631_RS10970 (2245286) | 2245286..2245459 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G5631_RS10975 (2245611) | 2245611..2246021 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| G5631_RS10980 (2246079) | 2246079..2246312 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G5631_RS10985 (2246701) | 2246701..2247270 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| G5631_RS10990 (2247221) | 2247221..2248183 | + | 963 | WP_278147326.1 | phage tail protein | - |
| G5631_RS10995 (2248183) | 2248183..2248760 | + | 578 | Protein_2147 | tail fiber assembly protein | - |
| G5631_RS11000 (2248858) | 2248858..2249448 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| G5631_RS11005 (2249765) | 2249765..2249998 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G5631_RS11010 (2250067) | 2250067..2250180 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| G5631_RS11015 (2250701) | 2250701..2252068 | + | 1368 | Protein_2151 | MHS family MFS transporter | - |
| G5631_RS11020 (2252157) | 2252157..2253617 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| G5631_RS11025 (2253652) | 2253652..2253855 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G5631_RS11030 (2254032) | 2254032..2254718 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G5631_RS11035 (2254807) | 2254807..2255553 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| G5631_RS11040 (2255690) | 2255690..2257735 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| G5631_RS11045 (2257779) | 2257779..2258297 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| G5631_RS11050 (2258573) | 2258573..2258965 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| G5631_RS11055 (2259220) | 2259220..2260110 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| G5631_RS11060 (2260225) | 2260225..2260329 | - | 105 | WP_211180496.1 | protein MgtT | - |
| G5631_RS11065 (2260329) | 2260329..2260424 | - | 96 | WP_000901367.1 | protein MgtS | - |
| G5631_RS11070 (2260551) | 2260551..2261738 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| G5631_RS11075 (2261933) | 2261933..2262832 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| G5631_RS11080 (2262863) | 2262863..2263081 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| G5631_RS11085 (2263113) | 2263113..2263496 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| G5631_RS11090 (2263516) | 2263516..2263950 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| G5631_RS11095 (2264162) | 2264162..2264827 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| G5631_RS11100 (2264852) | 2264852..2266042 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| G5631_RS11110 (2267064) | 2267064..2268083 | - | 1020 | Protein_2170 | putative protein YneK | - |
| G5631_RS11115 (2268161) | 2268161..2269042 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| G5631_RS11120 (2269143) | 2269143..2270531 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| G5631_RS11125 (2270595) | 2270595..2271521 | + | 927 | WP_000257409.1 | glutaminase B | - |
| G5631_RS11130 (2271521) | 2271521..2271880 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| G5631_RS11135 (2271953) | 2271953..2272939 | + | 987 | Protein_2175 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.009 |