MGE detailed information
MGE type: Prophage MGE length: 74620 bp
Accession: NZ_CP049110 Location: 1054860..1129479 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Accession: NZ_CP049110 Location: 1054860..1129479 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5631_RS05070 (1050593) | 1050593..1051726 | - | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
| G5631_RS05075 (1051723) | 1051723..1053162 | - | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| G5631_RS05080 (1053349) | 1053349..1054863 | + | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| G5631_RS05085 (1054860) | 1054860..1055825 | - | 966 | WP_001287420.1 | hypothetical protein | VF |
| G5631_RS05090 (1055818) | 1055818..1056591 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| G5631_RS05095 (1056658) | 1056658..1057017 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| G5631_RS05100 (1057122) | 1057122..1057901 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| G5631_RS05105 (1057905) | 1057905..1058276 | - | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| G5631_RS05110 (1058287) | 1058287..1059246 | - | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| G5631_RS05115 (1059243) | 1059243..1059806 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| G5631_RS05120 (1060062) | 1060062..1061147 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| G5631_RS05125 (1061292) | 1061292..1061789 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| G5631_RS05130 (1061869) | 1061869..1062930 | + | 1062 | WP_000963143.1 | recombinase RecA | - |
| G5631_RS05135 (1062999) | 1062999..1063499 | + | 501 | WP_000140508.1 | recombination regulator RecX | - |
| G5631_RS05140 (1063627) | 1063627..1066257 | + | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| G5631_RS05145 (1066492) | 1066492..1066677 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| G5631_RS05175 (1068135) | 1068135..1068701 | + | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| G5631_RS05180 (1068698) | 1068698..1069126 | + | 429 | WP_001287454.1 | YqaA family protein | - |
| G5631_RS05185 (1069199) | 1069199..1070755 | + | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| G5631_RS05190 (1070905) | 1070905..1071420 | + | 516 | WP_001130211.1 | hypothetical protein | VF |
| G5631_RS05195 (1071484) | 1071484..1073022 | - | 1539 | WP_001295176.1 | hypothetical protein | VF |
| G5631_RS05200 (1073039) | 1073039..1074211 | - | 1173 | WP_001326681.1 | hypothetical protein | VF |
| G5631_RS05205 (1074338) | 1074338..1074868 | - | 531 | WP_000378442.1 | hypothetical protein | VF |
| G5631_RS05210 (1074959) | 1074959..1075294 | - | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| G5631_RS05215 (1075284) | 1075284..1076021 | - | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| G5631_RS05220 (1076145) | 1076145..1077322 | - | 1178 | Protein_1018 | MFS transporter | - |
| G5631_RS05225 (1077514) | 1077514..1078506 | - | 993 | WP_103119216.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| G5631_RS05230 (1078564) | 1078564..1079628 | - | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| G5631_RS05235 (1079621) | 1079621..1080823 | - | 1203 | WP_000985494.1 | hypothetical protein | VF |
| G5631_RS05240 (1081177) | 1081177..1082136 | - | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| G5631_RS05245 (1082146) | 1082146..1084290 | - | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| G5631_RS05250 (1084263) | 1084263..1084673 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| G5631_RS05255 (1084670) | 1084670..1084915 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| G5631_RS05260 (1085163) | 1085163..1085492 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| G5631_RS05265 (1085644) | 1085644..1085988 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| G5631_RS05270 (1086025) | 1086025..1086474 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| G5631_RS05275 (1087143) | 1087143..1087547 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| G5631_RS05280 (1087594) | 1087594..1088118 | - | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| G5631_RS05285 (1088128) | 1088128..1088427 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| G5631_RS05290 (1088610) | 1088610..1088768 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| G5631_RS05295 (1088852) | 1088852..1089301 | + | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| G5631_RS05300 (1089302) | 1089302..1089964 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| G5631_RS05305 (1089985) | 1089985..1091385 | - | 1401 | WP_001295173.1 | GABA permease | - |
| G5631_RS05310 (1091623) | 1091623..1092903 | - | 1281 | WP_001087611.1 | hypothetical protein | VF |
| G5631_RS05315 (1092917) | 1092917..1094365 | - | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| G5631_RS05320 (1094388) | 1094388..1095656 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| G5631_RS05325 (1095676) | 1095676..1096653 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| G5631_RS05330 (1096989) | 1096989..1099241 | - | 2253 | Protein_1040 | alpha-amylase family glycosyl hydrolase | - |
| G5631_RS05340 (1100627) | 1100627..1102000 | + | 1374 | Protein_1041 | DUF5507 domain-containing protein | - |
| G5631_RS05345 (1102394) | 1102394..1102573 | + | 180 | WP_087676347.1 | DNA invertase | - |
| G5631_RS05350 (1102728) | 1102728..1102847 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| G5631_RS05355 (1102912) | 1102912..1107492 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| G5631_RS05360 (1107856) | 1107856..1108185 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| G5631_RS05365 (1108206) | 1108206..1108523 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| G5631_RS05370 (1108561) | 1108561..1108761 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| G5631_RS05375 (1108770) | 1108770..1109252 | - | 483 | WP_001407480.1 | RadC family protein | - |
| G5631_RS05380 (1109261) | 1109261..1109719 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| G5631_RS05385 (1109732) | 1109732..1109854 | + | 123 | WP_001407482.1 | hypothetical protein | - |
| G5631_RS05390 (1109822) | 1109822..1110006 | - | 185 | Protein_1051 | DUF905 family protein | - |
| G5631_RS05395 (1110617) | 1110617..1112320 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| G5631_RS05400 (1112462) | 1112462..1113471 | + | 1010 | Protein_1053 | arsenic transporter | - |
| G5631_RS05405 (1113484) | 1113484..1113636 | + | 153 | Protein_1054 | arsenate reductase | - |
| G5631_RS05410 (1114023) | 1114023..1114490 | - | 468 | WP_000702495.1 | protein YfjT | - |
| G5631_RS05415 (1114514) | 1114514..1114957 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| G5631_RS05420 (1114957) | 1114957..1115193 | - | 237 | WP_001144029.1 | protein YpjK | - |
| G5631_RS05425 (1115234) | 1115234..1115935 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| G5631_RS05430 (1116152) | 1116152..1116973 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| G5631_RS05435 (1117065) | 1117065..1117928 | - | 864 | WP_103119217.1 | GTPase family protein | - |
| G5631_RS05440 (1118284) | 1118284..1118655 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| G5631_RS05445 (1118648) | 1118648..1119721 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| G5631_RS05450 (1119862) | 1119862..1120125 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| G5631_RS05455 (1120485) | 1120485..1122101 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| G5631_RS05460 (1122098) | 1122098..1124287 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| G5631_RS05465 (1124465) | 1124465..1125091 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| G5631_RS05470 (1125244) | 1125244..1126653 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| G5631_RS05475 (1126782) | 1126782..1126994 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| G5631_RS05480 (1127038) | 1127038..1127994 | + | 957 | WP_000510827.1 | protein YfjH | - |
| G5631_RS05485 (1128238) | 1128238..1129479 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| G5631_RS05495 (1130260) | 1130260..1130742 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| G5631_RS05500 (1130913) | 1130913..1131350 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| G5631_RS05505 (1131340) | 1131340..1131630 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| G5631_RS05510 (1131692) | 1131692..1132033 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| G5631_RS05515 (1132182) | 1132182..1133843 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|