MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 22135 bp
Accession: NZ_CP049109 Location: 1870865..1892999 Organism: Sphingosinithalassobacter sp. zrk23 Replicon: chromosome
Accession: NZ_CP049109 Location: 1870865..1892999 Organism: Sphingosinithalassobacter sp. zrk23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C33_RS09155 () | 1866433..1867422 | + | 990 | WP_165326935.1 | polysaccharide deacetylase family protein | - |
| G5C33_RS09165 () | 1867520..1869067 | - | 1548 | WP_165326936.1 | recombinase family protein | - |
| G5C33_RS09170 () | 1869064..1869258 | - | 195 | WP_165326937.1 | hypothetical protein | - |
| G5C33_RS09175 () | 1869306..1869485 | - | 180 | WP_165326436.1 | hypothetical protein | - |
| G5C33_RS09180 () | 1870064..1870669 | - | 606 | WP_165326938.1 | hypothetical protein | - |
| G5C33_RS19195 () | 1872063..1872317 | - | 255 | WP_206518666.1 | IS5 family transposase ISMpo8 | Transposase |
| G5C33_RS19200 () | 1872338..1872766 | - | 429 | WP_206518667.1 | IS5 family transposase ISMpo8 | Transposase |
| G5C33_RS09195 () | 1872993..1874603 | - | 1611 | WP_165326939.1 | type IV secretory system conjugative DNA transfer family protein | - |
| G5C33_RS09200 () | 1874992..1875727 | - | 736 | Protein_1812 | IS3 family transposase ISMch1 | Transposase |
| G5C33_RS09205 () | 1875790..1875972 | + | 183 | Protein_1813 | DDE-type integrase/transposase/recombinase | - |
| G5C33_RS09210 () | 1875932..1876696 | - | 765 | WP_165326940.1 | IS30 family transposase ISMtsp4 | Transposase |
| G5C33_RS09215 () | 1876815..1877093 | + | 279 | Protein_1815 | IS3 family transposase ISMlo4 | Transposase |
| G5C33_RS09220 () | 1877220..1877783 | - | 564 | WP_165326941.1 | hypothetical protein | - |
| G5C33_RS09225 () | 1877780..1882045 | - | 4266 | WP_165326942.1 | RHS repeat-associated core domain-containing protein | - |
| G5C33_RS09230 () | 1882101..1882346 | - | 246 | WP_165326943.1 | RHS repeat protein | - |
| G5C33_RS09235 () | 1884079..1884780 | - | 702 | WP_165326944.1 | hypothetical protein | - |
| G5C33_RS09240 () | 1885557..1886246 | - | 690 | WP_165326945.1 | DNA methylase | - |
| G5C33_RS09245 () | 1886243..1886458 | - | 216 | WP_165326450.1 | hypothetical protein | - |
| G5C33_RS09250 () | 1886890..1887309 | + | 420 | WP_165326451.1 | MucR family transcriptional regulator | - |
| G5C33_RS09260 () | 1887459..1888043 | - | 585 | WP_165326452.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G5C33_RS09265 () | 1888260..1888493 | + | 234 | WP_165326453.1 | hypothetical protein | - |
| G5C33_RS09270 () | 1888535..1888921 | + | 387 | WP_165326947.1 | hypothetical protein | - |
| G5C33_RS09275 () | 1888918..1889820 | - | 903 | WP_165326948.1 | hypothetical protein | - |
| G5C33_RS09280 () | 1890023..1890298 | + | 276 | WP_165326949.1 | hypothetical protein | - |
| G5C33_RS09285 () | 1890356..1890643 | + | 288 | WP_165326950.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| G5C33_RS09290 () | 1890661..1891155 | + | 495 | WP_165328796.1 | GNAT family N-acetyltransferase | Toxin Detail |
| G5C33_RS09295 () | 1891218..1891520 | + | 303 | WP_206518668.1 | hypothetical protein | - |
| G5C33_RS09300 () | 1891572..1892999 | - | 1428 | WP_165326952.1 | relaxase | - |
| G5C33_RS09305 () | 1892996..1893370 | - | 375 | WP_165328797.1 | plasmid mobilization relaxosome protein MobC | - |
| G5C33_RS09315 () | 1893781..1894860 | - | 1080 | WP_165326953.1 | tyrosine-type recombinase/integrase | - |
| G5C33_RS09320 () | 1894863..1895060 | - | 198 | WP_165326954.1 | hypothetical protein | - |
| G5C33_RS09325 () | 1895057..1895356 | - | 300 | WP_165326955.1 | hypothetical protein | - |
| G5C33_RS09330 () | 1895461..1895904 | - | 444 | WP_165326956.1 | hypothetical protein | - |
| G5C33_RS09335 () | 1895901..1897622 | - | 1722 | WP_165326957.1 | DNA cytosine methyltransferase | - |
| G5C33_RS09340 () | 1897619..1897927 | - | 309 | WP_165326958.1 | DUF4326 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|