MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 150799 bp
Accession: NZ_CP049109 Location: 1277701..1428499 Organism: Sphingosinithalassobacter sp. zrk23 Replicon: chromosome
Accession: NZ_CP049109 Location: 1277701..1428499 Organism: Sphingosinithalassobacter sp. zrk23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C33_RS06275 () | 1273140..1274534 | + | 1395 | WP_165326432.1 | UDP-N-acetylmuramate--alanine ligase | - |
| G5C33_RS06280 () | 1274618..1275028 | + | 411 | WP_165326433.1 | hypothetical protein | - |
| G5C33_RS06285 () | 1275025..1275231 | + | 207 | WP_165326434.1 | helix-turn-helix transcriptional regulator | - |
| G5C33_RS06290 () | 1275390..1276184 | + | 795 | WP_165328734.1 | alpha/beta hydrolase | - |
| G5C33_RS06295 () | 1276257..1277192 | - | 936 | WP_165326435.1 | DUF2171 domain-containing protein | - |
| G5C33_RS19170 () | 1277992..1278576 | - | 585 | Protein_1239 | recombinase zinc beta ribbon domain-containing protein | - |
| G5C33_RS19175 () | 1278553..1279017 | - | 465 | Protein_1240 | recombinase family protein | - |
| G5C33_RS06310 () | 1279256..1279435 | - | 180 | WP_165326436.1 | hypothetical protein | - |
| G5C33_RS06315 () | 1279830..1280324 | + | 495 | WP_165326437.1 | hypothetical protein | - |
| G5C33_RS06320 () | 1280335..1281939 | - | 1605 | WP_165326438.1 | type IV secretory system conjugative DNA transfer family protein | - |
| G5C33_RS06325 () | 1282444..1282734 | - | 291 | WP_165326439.1 | hypothetical protein | - |
| G5C33_RS06330 () | 1282736..1283251 | - | 516 | WP_165326440.1 | antirestriction protein ArdA | - |
| G5C33_RS06335 () | 1283735..1284004 | - | 270 | WP_165326441.1 | hypothetical protein | - |
| G5C33_RS06340 () | 1284011..1284238 | - | 228 | WP_165326442.1 | hypothetical protein | - |
| G5C33_RS06345 () | 1284450..1284785 | - | 336 | WP_165326443.1 | hypothetical protein | - |
| G5C33_RS06350 () | 1286123..1287100 | - | 978 | WP_165328735.1 | IS91 family transposase ISWz1 | Transposase |
| G5C33_RS06355 () | 1287036..1287629 | + | 594 | WP_165325325.1 | hypothetical protein | - |
| G5C33_RS06360 () | 1288595..1292899 | - | 4305 | WP_165326444.1 | tRNA3(Ser)-specific nuclease WapA | VF |
| G5C33_RS06365 () | 1292956..1293201 | - | 246 | WP_165326445.1 | RHS repeat protein | - |
| G5C33_RS06370 () | 1293934..1296624 | + | 2691 | WP_165326446.1 | CHAT domain-containing protein | - |
| G5C33_RS06375 () | 1296625..1298052 | - | 1428 | WP_165326447.1 | hypothetical protein | - |
| G5C33_RS06380 () | 1298292..1298666 | + | 375 | WP_165326448.1 | hypothetical protein | - |
| G5C33_RS06385 () | 1298720..1298896 | - | 177 | WP_206518641.1 | hypothetical protein | - |
| G5C33_RS06390 () | 1298962..1300112 | + | 1151 | WP_165325588.1 | IS3 family transposase ISMamg1 | Transposase |
| G5C33_RS06395 () | 1300123..1300653 | - | 531 | WP_165326449.1 | DNA methylase | - |
| G5C33_RS06400 () | 1300650..1300865 | - | 216 | WP_165326450.1 | hypothetical protein | - |
| G5C33_RS06405 () | 1301298..1301717 | + | 420 | WP_165326451.1 | MucR family transcriptional regulator | - |
| G5C33_RS06410 () | 1301867..1302451 | - | 585 | WP_165326452.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G5C33_RS06415 () | 1302668..1302901 | + | 234 | WP_165326453.1 | hypothetical protein | - |
| G5C33_RS06420 () | 1302943..1303317 | + | 375 | WP_165326454.1 | hypothetical protein | - |
| G5C33_RS06425 () | 1303322..1304287 | - | 966 | WP_165326455.1 | hypothetical protein | - |
| G5C33_RS06430 () | 1304426..1304668 | + | 243 | WP_165326456.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| G5C33_RS06435 () | 1304665..1304964 | + | 300 | WP_165326457.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G5C33_RS06440 () | 1305052..1305354 | + | 303 | WP_165326458.1 | hypothetical protein | - |
| G5C33_RS06445 () | 1305671..1306660 | + | 990 | WP_165326459.1 | TauD/TfdA family dioxygenase | - |
| G5C33_RS06450 () | 1306715..1306975 | + | 261 | WP_165326460.1 | hypothetical protein | - |
| G5C33_RS06455 () | 1307035..1308345 | - | 1311 | WP_165326461.1 | relaxase | - |
| G5C33_RS06460 () | 1308447..1308821 | - | 375 | WP_165326462.1 | plasmid mobilization relaxosome protein MobC | - |
| G5C33_RS06470 () | 1309520..1310797 | - | 1278 | WP_165326464.1 | MFS transporter | - |
| G5C33_RS06475 () | 1310924..1311484 | + | 561 | WP_165326465.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| G5C33_RS06480 () | 1311484..1311741 | + | 258 | WP_165326466.1 | molybdopterin converting factor subunit 1 | - |
| G5C33_RS06485 () | 1311738..1312184 | + | 447 | WP_165326467.1 | molybdenum cofactor biosynthesis protein MoaE | - |
| G5C33_RS06490 () | 1312249..1312929 | + | 681 | WP_165326468.1 | YqcI/YcgG family protein | - |
| G5C33_RS06495 () | 1312926..1313510 | + | 585 | WP_165326469.1 | urea carboxylase-associated family protein | - |
| G5C33_RS06500 () | 1313515..1314420 | - | 906 | WP_165326470.1 | hydrogen peroxide-inducible genes activator | - |
| G5C33_RS06505 () | 1314566..1316146 | - | 1581 | WP_165326471.1 | alkyl hydroperoxide reductase subunit F | - |
| G5C33_RS06510 () | 1316232..1316795 | - | 564 | WP_165326472.1 | peroxiredoxin | - |
| G5C33_RS06515 () | 1316953..1317534 | - | 582 | WP_165326473.1 | hypothetical protein | - |
| G5C33_RS06520 () | 1317661..1318242 | - | 582 | WP_165326474.1 | hypothetical protein | - |
| G5C33_RS06525 () | 1318321..1319094 | - | 774 | WP_165326475.1 | sulfite exporter TauE/SafE family protein | - |
| G5C33_RS06530 () | 1319251..1319946 | + | 696 | WP_165326476.1 | Serine acetyltransferase | VF |
| G5C33_RS06535 () | 1319946..1320284 | + | 339 | WP_165326477.1 | DUF2794 domain-containing protein | - |
| G5C33_RS06540 () | 1320281..1320931 | - | 651 | WP_165326478.1 | DUF4386 domain-containing protein | - |
| G5C33_RS06545 () | 1320928..1322043 | - | 1116 | WP_165326479.1 | hypothetical protein | - |
| G5C33_RS06550 () | 1322145..1323041 | - | 897 | WP_165326480.1 | Putative short-chain type dehydrogenase/reductase | VF |
| G5C33_RS06555 () | 1323158..1323850 | - | 693 | WP_165326481.1 | Phosphate regulon transcriptional regulatory protein PhoB | VF |
| G5C33_RS06560 () | 1323867..1324565 | - | 699 | WP_165326482.1 | phosphate signaling complex protein PhoU | - |
| G5C33_RS06565 () | 1324589..1325407 | - | 819 | WP_165328737.1 | Phosphate import ATP-binding protein PstB | VF |
| G5C33_RS06570 () | 1325413..1326741 | - | 1329 | WP_165326483.1 | phosphate ABC transporter permease PstA | - |
| G5C33_RS06575 () | 1326734..1328110 | - | 1377 | WP_165326484.1 | phosphate ABC transporter permease subunit PstC | - |
| G5C33_RS06580 () | 1328156..1329187 | - | 1032 | WP_165326485.1 | substrate-binding domain-containing protein | - |
| G5C33_RS06585 () | 1329279..1330490 | - | 1212 | WP_165326486.1 | Alkaline phosphatase synthesis sensor protein PhoR | VF |
| G5C33_RS06590 () | 1330589..1330999 | + | 411 | WP_165326487.1 | hypothetical protein | - |
| G5C33_RS06595 () | 1331072..1331398 | + | 327 | WP_165326488.1 | HPr-rel-A system PqqD family peptide chaperone | - |
| G5C33_RS06600 () | 1331395..1332255 | + | 861 | WP_165326489.1 | HprK-related kinase A | - |
| G5C33_RS06605 () | 1332264..1333259 | + | 996 | WP_165326490.1 | nucleotidyltransferase family protein | - |
| G5C33_RS06610 () | 1333294..1333629 | + | 336 | WP_165326491.1 | hypothetical protein | - |
| G5C33_RS06615 () | 1333717..1334394 | - | 678 | WP_165326492.1 | HAD-IA family hydrolase | - |
| G5C33_RS06620 () | 1334469..1335821 | + | 1353 | WP_165326493.1 | Bifunctional protein GlmU | VF |
| G5C33_RS06625 () | 1335818..1336129 | + | 312 | WP_165326494.1 | hypothetical protein | - |
| G5C33_RS06630 () | 1336141..1337964 | + | 1824 | WP_165326495.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| G5C33_RS06635 () | 1337966..1338313 | - | 348 | WP_165326496.1 | response regulator | - |
| G5C33_RS06640 () | 1338322..1340487 | - | 2166 | WP_206518642.1 | PAS domain S-box protein | - |
| G5C33_RS06645 () | 1340719..1342605 | + | 1887 | WP_165328738.1 | putative signaling protein | VF |
| G5C33_RS06650 () | 1342605..1344482 | + | 1878 | WP_165326498.1 | HAMP domain-containing protein | - |
| G5C33_RS06655 () | 1344483..1345622 | - | 1140 | WP_165328739.1 | SET domain-containing protein | - |
| G5C33_RS06660 () | 1345826..1346389 | + | 564 | WP_206518643.1 | ADP-ribose pyrophosphatase | - |
| G5C33_RS06665 () | 1346400..1347224 | - | 825 | WP_165326499.1 | class I mannose-6-phosphate isomerase | - |
| G5C33_RS06670 () | 1347247..1348290 | - | 1044 | WP_165326500.1 | Alginate biosynthesis protein AlgA | VF |
| G5C33_RS06675 () | 1348407..1349186 | - | 780 | WP_206518644.1 | TSUP family transporter | - |
| G5C33_RS06680 () | 1349224..1349967 | - | 744 | WP_165326501.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| G5C33_RS06685 () | 1349972..1351885 | - | 1914 | WP_165326502.1 | Bifunctional enzyme CysN/CysC | VF |
| G5C33_RS06690 () | 1351885..1352805 | - | 921 | WP_165326503.1 | sulfate adenylyltransferase subunit CysD | - |
| G5C33_RS06695 () | 1353010..1354311 | - | 1302 | WP_165326504.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| G5C33_RS06700 () | 1354613..1355923 | - | 1311 | WP_165326505.1 | UDP-glucose 6-dehydrogenase | VF |
| G5C33_RS06705 () | 1356644..1357795 | + | 1152 | WP_165328742.1 | putative signaling protein | VF |
| G5C33_RS06710 () | 1358584..1360380 | + | 1797 | WP_206518699.1 | hybrid sensor histidine kinase/response regulator | - |
| G5C33_RS06715 () | 1360446..1360832 | + | 387 | WP_165326507.1 | Sensor histidine kinase RcsC | VF |
| G5C33_RS06720 () | 1361017..1361223 | + | 207 | WP_007404630.1 | 30S ribosomal protein S21 | - |
| G5C33_RS06725 () | 1361341..1361928 | + | 588 | WP_165326508.1 | putative FKBP-type peptidyl-prolyl cis-trans isomerase | VF |
| G5C33_RS06730 () | 1362086..1363945 | + | 1860 | WP_165326509.1 | HAD-IIIC family phosphatase | - |
| G5C33_RS06735 () | 1363903..1364664 | + | 762 | WP_165326510.1 | polysaccharide deacetylase family protein | - |
| G5C33_RS06740 () | 1364695..1365708 | - | 1014 | WP_165326511.1 | UDP-glucose 4-epimerase | VF |
| G5C33_RS06745 () | 1366083..1367150 | + | 1068 | WP_165326512.1 | GDP-mannose 4,6-dehydratase | VF |
| G5C33_RS06750 () | 1367178..1368110 | + | 933 | WP_165328743.1 | GDP-L-fucose synthase | VF |
| G5C33_RS06755 () | 1368114..1369337 | + | 1224 | WP_206518645.1 | Alpha-D-kanosaminyltransferase | VF |
| G5C33_RS06760 () | 1369443..1369781 | + | 339 | WP_165326513.1 | hypothetical protein | - |
| G5C33_RS06765 () | 1369794..1371206 | + | 1413 | WP_165326514.1 | SGNH/GDSL hydrolase family protein | - |
| G5C33_RS06770 () | 1371483..1372631 | + | 1149 | WP_165326515.1 | glycosyltransferase family 4 protein | - |
| G5C33_RS06775 () | 1372779..1373726 | + | 948 | WP_165328745.1 | glycosyltransferase family 2 protein | - |
| G5C33_RS06780 () | 1373740..1374324 | + | 585 | WP_165326516.1 | putative colanic acid biosynthesis acetyltransferase | - |
| G5C33_RS06785 () | 1374371..1375672 | + | 1302 | WP_165326517.1 | hypothetical protein | - |
| G5C33_RS06790 () | 1375781..1377037 | + | 1257 | WP_165326518.1 | Putative glycosyltransferase EpsD | VF |
| G5C33_RS06795 () | 1377065..1378309 | + | 1245 | WP_165326519.1 | oligosaccharide flippase family protein | - |
| G5C33_RS06800 () | 1378325..1379737 | - | 1413 | WP_165326520.1 | BNR-4 repeat-containing protein | - |
| G5C33_RS06805 () | 1379957..1380532 | + | 576 | WP_165326521.1 | polysaccharide export protein | - |
| G5C33_RS06810 () | 1380688..1381998 | + | 1311 | WP_165326522.1 | outer membrane beta-barrel protein | - |
| G5C33_RS06815 () | 1382100..1384169 | + | 2070 | WP_165326523.1 | Tyrosine-protein kinase ptk | VF |
| G5C33_RS06820 () | 1384214..1385533 | + | 1320 | WP_165326524.1 | hypothetical protein | - |
| G5C33_RS06825 () | 1385530..1386510 | + | 981 | WP_165326525.1 | glycosyltransferase | - |
| G5C33_RS06830 () | 1386488..1387570 | - | 1083 | WP_165326526.1 | glycosyltransferase family 4 protein | - |
| G5C33_RS06835 () | 1387572..1388867 | - | 1296 | WP_165326527.1 | O-antigen ligase family protein | - |
| G5C33_RS06840 () | 1389025..1389519 | - | 495 | WP_165326528.1 | glucuronosyltransferase | - |
| G5C33_RS06845 () | 1389516..1389911 | - | 396 | WP_206518646.1 | glucuronosyltransferase | - |
| G5C33_RS06850 () | 1390283..1391179 | + | 897 | WP_165326530.1 | serine/threonine protein phosphatase | - |
| G5C33_RS06855 () | 1391152..1392138 | - | 987 | WP_165326531.1 | class I SAM-dependent methyltransferase | - |
| G5C33_RS06860 () | 1392163..1392978 | - | 816 | WP_165326532.1 | hypothetical protein | - |
| G5C33_RS06865 () | 1393073..1394470 | - | 1398 | WP_165326533.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| G5C33_RS06870 () | 1394711..1396477 | - | 1767 | WP_165326534.1 | ISH3 family transposase ISHla8 | Transposase |
| G5C33_RS06875 () | 1396589..1397875 | + | 1287 | WP_165326535.1 | hypothetical protein | - |
| G5C33_RS06880 () | 1397881..1399008 | + | 1128 | WP_165326536.1 | acyltransferase | - |
| G5C33_RS06885 () | 1399025..1400119 | - | 1095 | WP_165326537.1 | acyltransferase | - |
| G5C33_RS06890 () | 1400313..1401197 | + | 885 | WP_165326538.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| G5C33_RS06895 () | 1401291..1402586 | + | 1296 | WP_165326539.1 | polysaccharide pyruvyl transferase family protein | - |
| G5C33_RS06900 () | 1402654..1404381 | + | 1728 | WP_165326540.1 | Protein glycosylation K | VF |
| G5C33_RS06905 () | 1404403..1405770 | + | 1368 | WP_165326541.1 | hypothetical protein | - |
| G5C33_RS06910 () | 1405767..1406930 | + | 1164 | WP_165326542.1 | polysaccharide pyruvyl transferase family protein | - |
| G5C33_RS06915 () | 1406927..1408183 | + | 1257 | WP_165326543.1 | hypothetical protein | - |
| G5C33_RS06920 () | 1408554..1409465 | - | 912 | WP_165326544.1 | glycosyltransferase | - |
| G5C33_RS06925 () | 1410143..1411063 | + | 921 | WP_165326545.1 | formyl transferase | - |
| G5C33_RS06930 () | 1411060..1412049 | - | 990 | WP_165326546.1 | hypothetical protein | - |
| G5C33_RS06935 () | 1412039..1413169 | - | 1131 | WP_165326547.1 | N-acylneuraminate cytidylyltransferase | VF |
| G5C33_RS06940 () | 1413449..1414192 | + | 744 | WP_165326548.1 | hypothetical protein | VF |
| G5C33_RS06945 () | 1414295..1416427 | + | 2133 | WP_165326549.1 | Tyrosine-protein kinase YwqD | VF |
| G5C33_RS06950 () | 1416455..1417531 | - | 1077 | WP_165326550.1 | glycosyltransferase | - |
| G5C33_RS06955 () | 1417542..1420106 | - | 2565 | WP_165326551.1 | O-antigen ligase family protein | - |
| G5C33_RS06960 () | 1420304..1421374 | - | 1071 | WP_165326552.1 | M48 family metalloprotease | - |
| G5C33_RS06965 () | 1421699..1421971 | + | 273 | WP_165326553.1 | hypothetical protein | - |
| G5C33_RS06970 () | 1422376..1423083 | + | 708 | WP_165326554.1 | class I SAM-dependent methyltransferase | - |
| G5C33_RS06975 () | 1423433..1424206 | - | 774 | WP_165326555.1 | metallophosphoesterase | - |
| G5C33_RS06980 () | 1424406..1425704 | - | 1299 | WP_165326556.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| G5C33_RS06985 () | 1425688..1426818 | - | 1131 | WP_165326557.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| G5C33_RS06990 () | 1426997..1427866 | + | 870 | WP_165326558.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| G5C33_RS06995 () | 1427873..1428634 | - | 762 | WP_165326559.1 | molybdopterin-synthase adenylyltransferase MoeB | - |
| G5C33_RS07000 () | 1428631..1429041 | - | 411 | WP_165326560.1 | hypothetical protein | - |
| G5C33_RS07005 () | 1429038..1429487 | - | 450 | WP_165326561.1 | dUTP diphosphatase | - |
| G5C33_RS07010 () | 1429484..1430149 | - | 666 | WP_165328746.1 | alpha/beta hydrolase | - |
| G5C33_RS07015 () | 1430274..1431449 | - | 1176 | WP_165326562.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| G5C33_RS07020 () | 1431446..1432558 | - | 1113 | WP_165326563.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|