MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63295 bp
Accession: NZ_CP049103 Location: 1..63295 Organism: Escherichia coli strain EC28 Replicon: plasmid pCTX-M-15
Accession: NZ_CP049103 Location: 1..63295 Organism: Escherichia coli strain EC28 Replicon: plasmid pCTX-M-15
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5V60_RS25195 () | 1..1029 | + | 1029 | WP_024172575.1 | replication initiation protein | - |
| G5V60_RS25200 () | 2389..3462 | - | 1074 | WP_164699458.1 | IS481 family transposase ISKpn28 | Transposase |
| G5V60_RS25205 () | 3534..3695 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| G5V60_RS25210 () | 3844..4440 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| G5V60_RS25780 () | 4458..4742 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| G5V60_RS25220 () | 4816..5481 | - | 666 | WP_015387337.1 | P-loop NTPase | - |
| G5V60_RS25225 () | 6068..6397 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| G5V60_RS25230 () | 6801..7316 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| G5V60_RS25235 () | 7420..7962 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| G5V60_RS25240 () | 7959..8213 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| G5V60_RS25245 () | 8210..8452 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| G5V60_RS25250 () | 8589..8921 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| G5V60_RS25255 () | 8968..9843 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| G5V60_RS25260 () | 10096..11358 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| G5V60_RS25265 () | 11743..11992 | + | 250 | Protein_14 | hypothetical protein | - |
| G5V60_RS25270 () | 12108..12395 | + | 288 | WP_000673430.1 | hypothetical protein | - |
| G5V60_RS25275 () | 12405..12821 | + | 417 | WP_053882499.1 | phage tail protein | - |
| G5V60_RS25280 () | 12818..13129 | + | 312 | WP_001310436.1 | hypothetical protein | - |
| G5V60_RS25285 () | 13551..13733 | - | 183 | WP_001401700.1 | hypothetical protein | - |
| G5V60_RS25290 () | 14291..14473 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| G5V60_RS25295 () | 14498..14935 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| G5V60_RS25300 () | 15066..15386 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| G5V60_RS25305 () | 15720..15898 | - | 179 | Protein_22 | hypothetical protein | - |
| G5V60_RS25310 () | 15935..16198 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| G5V60_RS25315 () | 16200..16619 | - | 420 | WP_001708405.1 | hypothetical protein | - |
| G5V60_RS25320 () | 16639..17346 | - | 708 | WP_000108796.1 | hypothetical protein | - |
| G5V60_RS25325 () | 17348..18100 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| G5V60_RS25330 () | 18118..18519 | - | 402 | WP_000717860.1 | hypothetical protein | - |
| G5V60_RS25335 () | 18888..19229 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| G5V60_RS25340 () | 19226..23431 | + | 4206 | WP_015387342.1 | hypothetical protein | - |
| G5V60_RS25345 () | 23474..23914 | - | 441 | WP_015387343.1 | hypothetical protein | - |
| G5V60_RS25350 () | 24159..24401 | - | 243 | WP_001356704.1 | hypothetical protein | - |
| G5V60_RS25355 () | 24736..24942 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| G5V60_RS25360 () | 25061..25381 | - | 321 | WP_000668719.1 | hypothetical protein | - |
| G5V60_RS25365 () | 25406..25612 | - | 207 | WP_021563360.1 | hypothetical protein | - |
| G5V60_RS25370 () | 25856..28012 | - | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| G5V60_RS25375 () | 28024..28611 | - | 588 | WP_015387347.1 | hypothetical protein | - |
| G5V60_RS25380 () | 28975..29379 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| G5V60_RS25385 () | 29395..29913 | - | 519 | WP_000698399.1 | thermonuclease family protein | - |
| G5V60_RS25390 () | 29960..30613 | - | 654 | WP_015387348.1 | hypothetical protein | - |
| G5V60_RS25395 () | 30625..31749 | - | 1125 | WP_000486719.1 | site-specific integrase | - |
| G5V60_RS25400 () | 31837..32106 | + | 270 | WP_000079599.1 | hypothetical protein | - |
| G5V60_RS25785 () | 32401..32610 | + | 210 | WP_071599127.1 | prepilin | - |
| G5V60_RS25405 () | 32607..33983 | - | 1377 | WP_000750519.1 | hypothetical protein | VF |
| G5V60_RS25410 () | 33996..34631 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| G5V60_RS25415 () | 34635..35117 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| G5V60_RS25420 () | 35184..35741 | - | 558 | WP_000095051.1 | hypothetical protein | - |
| G5V60_RS25425 () | 35786..36895 | - | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G5V60_RS25430 () | 36886..38424 | - | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| G5V60_RS25435 () | 38449..38943 | - | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| G5V60_RS25440 () | 38927..40249 | - | 1323 | WP_000454143.1 | type 4b pilus protein PilO2 | - |
| G5V60_RS25445 () | 40288..41931 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| G5V60_RS25450 () | 41924..42442 | - | 519 | WP_015387353.1 | YfdA protein | - |
| G5V60_RS25455 () | 42489..44447 | - | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| G5V60_RS25460 () | 44463..45518 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| G5V60_RS25465 () | 45537..46676 | - | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| G5V60_RS25470 () | 46666..47367 | - | 702 | WP_053882504.1 | Type IV secretion system protein PtlF | VF |
| G5V60_RS25475 () | 47433..48167 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| G5V60_RS25480 () | 48331..50688 | - | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| G5V60_RS25485 () | 50694..51014 | - | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| G5V60_RS25490 () | 51085..51273 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| G5V60_RS25495 () | 51375..51959 | - | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| G5V60_RS25500 () | 51980..52378 | - | 399 | WP_001708012.1 | hypothetical protein | - |
| G5V60_RS25505 () | 52718..53155 | - | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| G5V60_RS25510 () | 53161..54396 | - | 1236 | WP_001419735.1 | hypothetical protein | VF |
| G5V60_RS25515 () | 54399..54698 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| G5V60_RS25520 () | 54765..55397 | - | 633 | WP_001419736.1 | hypothetical protein | - |
| G5V60_RS25525 () | 55445..56254 | + | 810 | WP_001419737.1 | hypothetical protein | - |
| G5V60_RS25530 () | 56301..56537 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| G5V60_RS25535 () | 56541..57188 | - | 648 | WP_001419738.1 | hypothetical protein | VF |
| G5V60_RS25540 () | 57194..58180 | - | 987 | WP_001419739.1 | type IV secretion system protein | - |
| G5V60_RS25545 () | 58184..58441 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| G5V60_RS25550 () | 58438..58740 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| G5V60_RS25555 () | 58756..58971 | - | 216 | WP_001360344.1 | hypothetical protein | - |
| G5V60_RS25560 () | 59155..59817 | - | 663 | WP_001419740.1 | hypothetical protein | - |
| G5V60_RS25565 () | 59828..59998 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| G5V60_RS25570 () | 60002..60445 | - | 444 | WP_000964840.1 | NfeD family protein | - |
| G5V60_RS25575 () | 60518..61471 | - | 954 | WP_072105959.1 | SPFH/Band 7/PHB domain protein | - |
| G5V60_RS25580 () | 61517..61711 | - | 195 | WP_000049865.1 | DUF1187 family protein | - |
| G5V60_RS25585 () | 61704..62210 | - | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|