MGE detailed information
MGE type: Genomic_island MGE length: 41205 bp
Accession: NZ_CP049101 Location: 1989717..2030921 Organism: Escherichia coli strain EC28 Replicon: chromosome
Accession: NZ_CP049101 Location: 1989717..2030921 Organism: Escherichia coli strain EC28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5V60_RS09455 () | 1985218..1985736 | - | 519 | WP_164699366.1 | propanediol dehydratase small subunit PduE | - |
| G5V60_RS09460 () | 1985751..1986419 | - | 669 | WP_000405041.1 | propanediol/glycerol family dehydratase medium subunit | - |
| G5V60_RS09465 () | 1986429..1988093 | - | 1665 | WP_001524957.1 | propanediol dehydratase large subunit PduC | - |
| G5V60_RS09470 () | 1988112..1988924 | - | 813 | WP_000097484.1 | propanediol utilization microcompartment protein PduB | - |
| G5V60_RS09475 () | 1988921..1989205 | - | 285 | WP_001183614.1 | propanediol utilization microcompartment protein PduA | - |
| G5V60_RS09480 () | 1989717..1990526 | + | 810 | WP_001000048.1 | propanediol diffusion facilitator PduF | - |
| G5V60_RS09485 () | 1990729..1991643 | + | 915 | WP_000622044.1 | Arabinose operon regulatory protein | VF |
| G5V60_RS09490 () | 1992128..1992565 | + | 438 | WP_001524956.1 | hypothetical protein | - |
| G5V60_RS09495 () | 1992699..1993244 | + | 546 | WP_000973172.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| G5V60_RS09500 () | 1993241..1993984 | + | 744 | WP_001297350.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| G5V60_RS09505 () | 1993996..1995075 | + | 1080 | WP_001524954.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| G5V60_RS09510 () | 1995137..1996063 | + | 927 | WP_001524952.1 | L,D-transpeptidase | - |
| G5V60_RS09515 () | 1996237..1997202 | + | 966 | WP_001524950.1 | hypothetical protein | - |
| G5V60_RS09520 () | 1997254..1997712 | - | 459 | WP_000667216.1 | PTS sugar transporter subunit IIA | - |
| G5V60_RS09525 () | 1997723..1998007 | - | 285 | WP_000723158.1 | PTS sugar transporter subunit IIB | - |
| G5V60_RS09530 () | 1998031..1999401 | - | 1371 | WP_000420479.1 | PTS galactitol transporter subunit IIC | - |
| G5V60_RS09535 () | 1999405..1999941 | - | 537 | WP_000850105.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| G5V60_RS09540 () | 2000290..2001045 | + | 756 | WP_000281586.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| G5V60_RS09545 () | 2001384..2001827 | + | 444 | WP_001527205.1 | PTS sugar transporter subunit IIA | - |
| G5V60_RS09550 () | 2001846..2002139 | + | 294 | WP_000608246.1 | PTS sugar transporter subunit IIB | - |
| G5V60_RS09555 () | 2002160..2003413 | + | 1254 | WP_000425553.1 | PTS galactitol transporter subunit IIC | - |
| G5V60_RS09560 () | 2003436..2004080 | + | 645 | WP_001527203.1 | Ribulose-phosphate 3-epimerase | VF |
| G5V60_RS09565 () | 2004176..2004928 | + | 753 | WP_001527201.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| G5V60_RS09570 () | 2004944..2005504 | + | 561 | WP_001527199.1 | SIS domain-containing protein | - |
| G5V60_RS09585 () | 2006793..2007665 | - | 873 | Protein_1868 | AAA family ATPase | - |
| G5V60_RS09590 () | 2007803..2010259 | - | 2457 | WP_023351760.1 | hypothetical protein | - |
| G5V60_RS09595 () | 2010263..2014165 | - | 3903 | WP_001527192.1 | hypothetical protein | - |
| G5V60_RS25685 () | 2014366..2014752 | + | 387 | WP_187415326.1 | ash family protein | - |
| G5V60_RS09600 () | 2014664..2015077 | + | 414 | WP_001527191.1 | hypothetical protein | - |
| G5V60_RS09605 () | 2015128..2015334 | + | 207 | WP_001527190.1 | helix-turn-helix domain-containing protein | - |
| G5V60_RS25690 () | 2015393..2015584 | - | 192 | WP_077561361.1 | hypothetical protein | - |
| G5V60_RS09615 () | 2015682..2015939 | + | 258 | WP_000288812.1 | antitoxin | Antitoxin Detail |
| G5V60_RS09620 () | 2015940..2016272 | + | 333 | WP_000373724.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| G5V60_RS09625 () | 2016319..2016675 | - | 357 | WP_024186914.1 | hypothetical protein | - |
| G5V60_RS09630 () | 2016656..2016982 | - | 327 | Protein_1878 | hypothetical protein | - |
| G5V60_RS09635 () | 2017120..2017998 | + | 879 | WP_001527182.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| G5V60_RS09640 () | 2018836..2020098 | - | 1263 | WP_001527179.1 | Prophage integrase IntS ; Integrase | Integrase |
| G5V60_RS09650 () | 2020662..2021579 | + | 918 | WP_001011491.1 | nitrogen assimilation transcriptional regulator NAC | - |
| G5V60_RS09655 () | 2021681..2022631 | + | 951 | WP_001527176.1 | HTH-type transcriptional regulator Cbl | - |
| G5V60_RS09665 () | 2022749..2024392 | + | 1644 | WP_123007611.1 | toxic metabolite efflux MATE transporter YeeO | - |
| G5V60_RS09675 () | 2025019..2025735 | - | 717 | WP_000532923.1 | putative transcriptional regulatory protein YeeN | VF |
| G5V60_RS09680 () | 2026078..2027532 | - | 1455 | WP_001060231.1 | AMP nucleosidase | - |
| G5V60_RS09685 () | 2027634..2028950 | - | 1317 | WP_000378562.1 | shikimate transporter | - |
| G5V60_RS09690 () | 2029265..2030317 | + | 1053 | WP_000480517.1 | glycosyltransferase family 9 protein | - |
| G5V60_RS09700 () | 2030487..2032609 | - | 2123 | Protein_1888 | Ig-like domain-containing protein | - |
| G5V60_RS09705 () | 2032536..2033285 | - | 750 | WP_000039788.1 | inverse autotransporter beta domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|