MGE detailed information
MGE type: Prophage MGE length: 49886 bp
Accession: NZ_CP049088 Location: 540481..590366 Organism: Glaesserella parasuis strain sHPS7 Replicon: chromosome
Accession: NZ_CP049088 Location: 540481..590366 Organism: Glaesserella parasuis strain sHPS7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C59_RS02655 () | 536639..537520 | - | 882 | WP_021118173.1 | N-acetylneuraminate lyase | - |
| G5C59_RS02660 () | 537604..538470 | - | 867 | WP_021109517.1 | MurR/RpiR family transcriptional regulator | - |
| G5C59_RS02665 () | 538472..538942 | - | 471 | WP_016527934.1 | YhcH/YjgK/YiaL family protein | - |
| G5C59_RS02670 () | 539270..539545 | - | 276 | WP_035525292.1 | hypothetical protein | - |
| G5C59_RS02675 () | 540107..540403 | - | 297 | WP_035491741.1 | hypothetical protein | - |
| G5C59_RS02680 () | 540481..545706 | - | 5226 | WP_164681597.1 | DUF1983 domain-containing protein | - |
| G5C59_RS02685 () | 545765..545941 | + | 177 | WP_021113607.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| G5C59_RS02690 () | 545988..546401 | + | 414 | WP_021113608.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| G5C59_RS02695 () | 546398..547135 | - | 738 | WP_164681598.1 | phage minor tail protein L | - |
| G5C59_RS02700 () | 547145..550408 | - | 3264 | WP_021118485.1 | tape measure protein | - |
| G5C59_RS02705 () | 550483..550743 | - | 261 | WP_021118484.1 | hypothetical protein | - |
| G5C59_RS02710 () | 550797..551123 | - | 327 | WP_021118483.1 | phage tail protein | - |
| G5C59_RS02715 () | 551125..551460 | - | 336 | WP_021118482.1 | hypothetical protein | - |
| G5C59_RS02720 () | 551469..551873 | - | 405 | WP_021118481.1 | hypothetical protein | - |
| G5C59_RS02725 () | 551889..552893 | - | 1005 | WP_021118480.1 | hypothetical protein | - |
| G5C59_RS02730 () | 552896..553297 | - | 402 | WP_021118479.1 | hypothetical protein | - |
| G5C59_RS02735 () | 553297..553710 | - | 414 | WP_021118478.1 | HK97 gp10 family phage protein | - |
| G5C59_RS02740 () | 553703..554083 | - | 381 | WP_021118477.1 | hypothetical protein | - |
| G5C59_RS02745 () | 554086..554547 | - | 462 | WP_021118476.1 | hypothetical protein | - |
| G5C59_RS02750 () | 554522..554872 | - | 351 | WP_021118475.1 | heH/LEM domain protein | - |
| G5C59_RS02755 () | 554926..555876 | - | 951 | WP_021118474.1 | hypothetical protein | - |
| G5C59_RS02760 () | 555905..556639 | - | 735 | WP_021118473.1 | hypothetical protein | - |
| G5C59_RS11370 () | 556854..557609 | - | 756 | WP_206337556.1 | recombinase | - |
| G5C59_RS02765 () | 557598..558629 | - | 1032 | Protein_536 | minor capsid protein | - |
| G5C59_RS02770 () | 558592..559832 | - | 1241 | Protein_537 | DUF4055 domain-containing protein | - |
| G5C59_RS02775 () | 559842..561077 | - | 1236 | WP_164681599.1 | PBSX family phage terminase large subunit | - |
| G5C59_RS02780 () | 561061..561576 | - | 516 | WP_021118468.1 | terminase small subunit | - |
| G5C59_RS02785 () | 561592..561738 | - | 147 | WP_164681526.1 | hypothetical protein | - |
| G5C59_RS02790 () | 561963..562178 | - | 216 | WP_021116912.1 | hypothetical protein | - |
| G5C59_RS02795 () | 562141..562485 | - | 345 | WP_021118467.1 | DUF2570 family protein | - |
| G5C59_RS02800 () | 562458..563003 | - | 546 | WP_021118466.1 | lysozyme | - |
| G5C59_RS02805 () | 562978..563277 | - | 300 | WP_206337554.1 | hypothetical protein | - |
| G5C59_RS02810 () | 563389..563838 | + | 450 | WP_042905676.1 | hypothetical protein | - |
| G5C59_RS02815 () | 563801..563995 | - | 195 | WP_021110729.1 | hypothetical protein | - |
| G5C59_RS02820 () | 564472..565059 | - | 588 | Protein_547 | phage antirepressor N-terminal domain-containing protein | - |
| G5C59_RS02825 () | 566031..566216 | + | 186 | WP_021118464.1 | hypothetical protein | - |
| G5C59_RS02830 () | 566225..566602 | - | 378 | WP_021118463.1 | ECF sigma factor family protein | - |
| G5C59_RS02835 () | 566599..567003 | - | 405 | WP_005714425.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G5C59_RS02840 () | 567000..567290 | - | 291 | WP_021118462.1 | DUF1364 domain-containing protein | - |
| G5C59_RS02845 () | 567395..567562 | + | 168 | WP_200859958.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| G5C59_RS02850 () | 567601..568008 | + | 408 | WP_005714429.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| G5C59_RS02855 () | 568042..568491 | - | 450 | WP_164681600.1 | recombination protein NinB | - |
| G5C59_RS02860 () | 568793..569344 | - | 552 | WP_164681601.1 | adenine methyltransferase | - |
| G5C59_RS02865 () | 569345..570700 | - | 1356 | WP_164681602.1 | AAA family ATPase | - |
| G5C59_RS02870 () | 570700..571176 | - | 477 | WP_164681603.1 | hypothetical protein | - |
| G5C59_RS02875 () | 571208..571570 | - | 363 | WP_164681604.1 | replication protein | - |
| G5C59_RS02880 () | 571548..571730 | - | 183 | WP_164681605.1 | hypothetical protein | - |
| G5C59_RS02885 () | 571773..572048 | - | 276 | WP_021110741.1 | hypothetical protein | - |
| G5C59_RS02890 () | 572069..572275 | - | 207 | WP_012621794.1 | helix-turn-helix transcriptional regulator | - |
| G5C59_RS02895 () | 572410..573063 | + | 654 | WP_164681606.1 | LexA family transcriptional regulator | - |
| G5C59_RS02900 () | 573166..574862 | + | 1697 | Protein_563 | AAA family ATPase | - |
| G5C59_RS02905 () | 574901..575716 | + | 816 | WP_164681607.1 | DNA adenine methylase | - |
| G5C59_RS02910 () | 575802..576398 | - | 597 | WP_164681608.1 | hypothetical protein | - |
| G5C59_RS02915 () | 576744..576890 | - | 147 | WP_021112693.1 | hypothetical protein | - |
| G5C59_RS02920 () | 577128..577343 | + | 216 | WP_021110748.1 | hypothetical protein | - |
| G5C59_RS02925 () | 577285..577593 | - | 309 | WP_160405318.1 | hypothetical protein | - |
| G5C59_RS02930 () | 577691..578332 | + | 642 | WP_021118452.1 | DUF3560 domain-containing protein | - |
| G5C59_RS02935 () | 578405..578737 | - | 333 | WP_005715000.1 | hypothetical protein | - |
| G5C59_RS02940 () | 578849..579037 | - | 189 | WP_005714998.1 | hypothetical protein | - |
| G5C59_RS11375 () | 579564..579920 | + | 357 | Protein_572 | KilA-N domain-containing protein | - |
| G5C59_RS02950 () | 580445..580765 | + | 321 | WP_021118256.1 | hypothetical protein | - |
| G5C59_RS02955 () | 580762..580983 | + | 222 | WP_021118257.1 | hypothetical protein | - |
| G5C59_RS02960 () | 580970..581176 | + | 207 | WP_021118258.1 | hypothetical protein | - |
| G5C59_RS02965 () | 581256..581732 | + | 477 | WP_021110753.1 | siphovirus Gp157 family protein | - |
| G5C59_RS02970 () | 581754..582410 | + | 657 | WP_021118259.1 | AAA family ATPase | - |
| G5C59_RS02975 () | 582412..583050 | + | 639 | WP_021118260.1 | hypothetical protein | - |
| G5C59_RS02980 () | 583163..583351 | - | 189 | WP_021118261.1 | hypothetical protein | - |
| G5C59_RS02985 () | 583698..584270 | + | 573 | WP_164681609.1 | hypothetical protein | - |
| G5C59_RS02990 () | 584307..585089 | + | 783 | WP_164681610.1 | riboflavin synthase subunit alpha | - |
| G5C59_RS02995 () | 585091..585735 | + | 645 | WP_078208345.1 | N-6 DNA methylase | - |
| G5C59_RS03000 () | 585704..585967 | + | 264 | WP_164681611.1 | hypothetical protein | - |
| G5C59_RS03005 () | 585981..586667 | + | 687 | WP_164681612.1 | hypothetical protein | - |
| G5C59_RS03010 () | 586974..587423 | + | 450 | WP_164681613.1 | DUF551 domain-containing protein | - |
| G5C59_RS03015 () | 587480..588343 | + | 864 | WP_021118921.1 | SPFH domain / Band 7 family protein | - |
| G5C59_RS03020 () | 588562..588759 | + | 198 | WP_164681614.1 | hypothetical protein | - |
| G5C59_RS03025 () | 588756..589049 | + | 294 | WP_021118174.1 | hypothetical protein | - |
| G5C59_RS03030 () | 589081..589371 | + | 291 | WP_005712911.1 | hypothetical protein | - |
| G5C59_RS03035 () | 589368..590366 | - | 999 | WP_005712908.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| G5C59_RS03045 () | 590668..590997 | - | 330 | WP_021118175.1 | preprotein translocase subunit SecG | - |
| G5C59_RS03050 () | 591123..593042 | - | 1920 | WP_021118176.1 | DNA topoisomerase III | - |
| G5C59_RS03055 () | 593050..593874 | - | 825 | WP_021118177.1 | penicillin-insensitive murein endopeptidase | - |
| G5C59_RS03060 () | 593889..594965 | - | 1077 | WP_021118178.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| G5C59_RS03065 () | 594965..595363 | - | 399 | WP_021110771.1 | DUF423 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|