MGE detailed information
MGE type: IScluster/Tn MGE length: 11771 bp
Accession: NZ_CP049088 Location: 1978411..1990181 Organism: Glaesserella parasuis strain sHPS7 Replicon: chromosome
Accession: NZ_CP049088 Location: 1978411..1990181 Organism: Glaesserella parasuis strain sHPS7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C59_RS09670 () | 1973590..1974297 | - | 708 | WP_164681775.1 | methyltransferase | - |
| G5C59_RS09675 () | 1974300..1975241 | - | 942 | WP_016527481.1 | type I pantothenate kinase | - |
| G5C59_RS09700 () | 1976107..1977294 | + | 1188 | WP_016527483.1 | elongation factor Tu | - |
| G5C59_RS09705 () | 1977419..1978022 | - | 604 | Protein_1886 | transposase | - |
| G5C59_RS09710 () | 1978411..1978963 | + | 553 | Protein_1887 | IS5 family transposase | - |
| G5C59_RS09715 () | 1978990..1979954 | - | 965 | Protein_1888 | IS3 family transposase ISHin1 | Transposase |
| G5C59_RS09720 () | 1980055..1981044 | - | 990 | WP_035524355.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| G5C59_RS09725 () | 1981117..1981413 | - | 297 | WP_164681833.1 | putative addiction module antidote protein | Antitoxin Detail |
| G5C59_RS09730 () | 1981421..1981756 | - | 336 | WP_075630966.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G5C59_RS09735 () | 1981915..1982319 | + | 405 | WP_021110905.1 | DNA polymerase III subunit psi | - |
| G5C59_RS09740 () | 1982434..1982778 | + | 345 | WP_035524358.1 | hypothetical protein | - |
| G5C59_RS09745 () | 1982841..1983185 | + | 345 | WP_164681776.1 | oligoendopeptidase F family protein | - |
| G5C59_RS09750 () | 1983202..1983555 | + | 354 | WP_164681777.1 | hypothetical protein | - |
| G5C59_RS09755 () | 1983616..1983780 | + | 165 | WP_164681778.1 | hypothetical protein | - |
| G5C59_RS09760 () | 1983872..1984615 | + | 744 | Protein_1897 | IS481 family transposase ISErsp1 | Transposase |
| G5C59_RS09765 () | 1984804..1984989 | - | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| G5C59_RS09770 () | 1984986..1985558 | - | 573 | WP_021116087.1 | sigma-70 family RNA polymerase sigma factor | - |
| G5C59_RS09775 () | 1985699..1986028 | + | 330 | WP_021110897.1 | hypothetical protein | - |
| G5C59_RS09780 () | 1986133..1987203 | + | 1071 | WP_026916855.1 | Peptide methionine sulfoxide reductase MsrA/MsrB | VF |
| G5C59_RS09785 () | 1987205..1987855 | + | 651 | WP_010786760.1 | sulfite exporter TauE/SafE family protein | - |
| G5C59_RS09790 () | 1987873..1988352 | + | 480 | WP_010786761.1 | hypothetical protein | VF |
| G5C59_RS09795 () | 1988536..1989252 | + | 717 | Protein_1904 | IS481 family transposase ISShes15 | Transposase |
| G5C59_RS09800 () | 1989212..1990181 | - | 970 | Protein_1905 | IS256 family transposase ISEc39 | Transposase |
| G5C59_RS09805 () | 1990281..1991207 | - | 927 | WP_021118532.1 | hypothetical protein | - |
| G5C59_RS09810 () | 1991231..1991830 | - | 600 | WP_021118533.1 | histidine phosphatase family protein | - |
| G5C59_RS09815 () | 1991841..1993292 | - | 1452 | WP_021118534.1 | DASS family sodium-coupled anion symporter | - |
| G5C59_RS09820 () | 1993404..1994300 | + | 897 | WP_021118535.1 | LysR family transcriptional regulator | - |
| G5C59_RS09825 () | 1994445..1995125 | + | 681 | WP_021114283.1 | DNA mismatch repair endonuclease MutH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|