MGE detailed information
MGE type: Conjugative plasmid MGE length: 70739 bp
Accession: NZ_CP049078 Location: 1..70739 Organism: Escherichia coli strain p11A Replicon: plasmid p11A_p1
Accession: NZ_CP049078 Location: 1..70739 Organism: Escherichia coli strain p11A Replicon: plasmid p11A_p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6P89_RS25955 () | 1..2631 | + | 2631 | WP_049092012.1 | type IV secretion system protein TraC | - |
| G6P89_RS25960 () | 2628..3014 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| G6P89_RS25965 () | 3011..3643 | + | 633 | WP_001526032.1 | type-F conjugative transfer system protein TraW | - |
| G6P89_RS25970 () | 3640..4632 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| G6P89_RS25975 () | 4662..4967 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| G6P89_RS25980 () | 4976..5614 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G6P89_RS25985 () | 5611..7461 | + | 1851 | WP_032195763.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G6P89_RS25990 () | 7488..7745 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| G6P89_RS25995 () | 7738..8481 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G6P89_RS26000 () | 8495..8836 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| G6P89_RS26005 () | 8817..9152 | - | 336 | WP_001620807.1 | hypothetical protein | - |
| G6P89_RS26010 () | 9233..9517 | + | 285 | WP_042017850.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G6P89_RS26015 () | 9504..10049 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G6P89_RS26020 () | 9979..10353 | + | 375 | WP_071589535.1 | P-type conjugative transfer protein TrbJ | - |
| G6P89_RS26025 () | 10274..10699 | + | 426 | WP_071589536.1 | F-type conjugal transfer protein TrbF | - |
| G6P89_RS26030 () | 10686..12059 | + | 1374 | WP_001535740.1 | conjugal transfer protein TraH | - |
| G6P89_RS26035 () | 12056..14881 | + | 2826 | WP_165696591.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G6P89_RS26040 () | 14878..15387 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| G6P89_RS26045 () | 15401..16132 | + | 732 | WP_042018826.1 | complement resistance protein TraT | - |
| G6P89_RS26050 () | 16335..17072 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| G6P89_RS26055 () | 17123..19330 | + | 2208 | WP_032362909.1 | type IV conjugative transfer system coupling protein TraD | - |
| G6P89_RS26060 () | 19330..24600 | + | 5271 | WP_097760904.1 | Multifunctional conjugation protein TraI | Relaxase |
| G6P89_RS26065 () | 24620..25366 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| G6P89_RS26070 () | 25425..26285 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| G6P89_RS26075 () | 26388..26948 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| G6P89_RS26080 () | 27077..27289 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| G6P89_RS26085 () | 27534..27995 | + | 462 | WP_016230918.1 | thermonuclease family protein | - |
| G6P89_RS26090 () | 28041..28250 | + | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| G6P89_RS26095 () | 28288..28515 | + | 228 | Protein_28 | hypothetical protein | - |
| G6P89_RS26100 () | 28532..29229 | - | 698 | Protein_29 | IS1 family transposase IS1R | Transposase |
| G6P89_RS26105 () | 29286..29654 | + | 369 | Protein_30 | DUF2726 domain-containing protein | - |
| G6P89_RS26110 () | 29894..30154 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| G6P89_RS26115 () | 30378..30452 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| G6P89_RS26120 () | 30445..31302 | + | 858 | WP_042018306.1 | incFII family plasmid replication initiator RepA | - |
| G6P89_RS26125 () | 32216..32485 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| G6P89_RS26130 () | 32482..32763 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6P89_RS26135 () | 32809..33657 | + | 849 | WP_016235419.1 | 3'-5' exonuclease | - |
| G6P89_RS26140 () | 33774..34256 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| G6P89_RS26145 () | 34616..35803 | - | 1188 | Protein_38 | IS91 family transposase IS91 | Transposase |
| G6P89_RS26150 () | 35803..36168 | - | 366 | WP_016235422.1 | hypothetical protein | - |
| G6P89_RS26155 () | 36696..37205 | + | 510 | WP_000115001.1 | peptide deformylase | - |
| G6P89_RS26160 () | 37220..37321 | + | 102 | Protein_41 | methionyl-tRNA formyltransferase | - |
| G6P89_RS26165 () | 37581..37709 | + | 129 | Protein_42 | DUF2164 family protein | - |
| G6P89_RS26170 () | 37706..38068 | + | 363 | WP_000181069.1 | hypothetical protein | - |
| G6P89_RS26175 () | 38401..38928 | - | 528 | WP_001196880.1 | DoxX family protein | - |
| G6P89_RS26180 () | 38930..39688 | - | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| G6P89_RS26185 () | 39657..40583 | - | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| G6P89_RS26190 () | 40615..40905 | - | 291 | WP_000754127.1 | DUF2282 domain-containing protein | - |
| G6P89_RS26195 () | 41214..41771 | - | 558 | WP_000103553.1 | hypothetical protein | VF |
| G6P89_RS26200 () | 42419..42985 | + | 567 | WP_000587874.1 | hypothetical protein | - |
| G6P89_RS26205 () | 43053..43172 | - | 120 | Protein_50 | transposase domain-containing protein | - |
| G6P89_RS26210 () | 43374..44354 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| G6P89_RS26215 () | 44357..44779 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| G6P89_RS26220 () | 45188..46090 | + | 903 | WP_077631593.1 | DUF1281 domain-containing protein | - |
| G6P89_RS26225 () | 46087..46398 | + | 312 | WP_032142385.1 | hypothetical protein | - |
| G6P89_RS26230 () | 46474..47157 | + | 684 | WP_016235423.1 | DNA methylase | - |
| G6P89_RS26235 () | 47158..47379 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| G6P89_RS26240 () | 47393..47827 | + | 435 | WP_016235424.1 | DUF1380 family protein | - |
| G6P89_RS26245 () | 47872..48642 | + | 771 | WP_045232994.1 | hypothetical protein | - |
| G6P89_RS26250 () | 49182..49484 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| G6P89_RS26255 () | 49531..49950 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| G6P89_RS26260 () | 49950..50141 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| G6P89_RS26265 () | 50120..50425 | - | 306 | WP_032150796.1 | hypothetical protein | - |
| G6P89_RS26270 () | 51106..51336 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| G6P89_RS26275 () | 51388..52749 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| G6P89_RS26280 () | 52796..53359 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| G6P89_RS26285 () | 53445..53903 | - | 459 | WP_024195276.1 | hypothetical protein | - |
| G6P89_RS26290 () | 54205..54732 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| G6P89_RS26295 () | 54790..55023 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| G6P89_RS26300 () | 55084..57048 | + | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| G6P89_RS26305 () | 57117..57551 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| G6P89_RS26310 () | 57548..58267 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| G6P89_RS26315 () | 58264..58578 | + | 315 | WP_001562885.1 | hypothetical protein | - |
| - () | 58535..58720 | + | 186 | NuclAT_0 | - | - |
| - () | 58535..58720 | + | 186 | NuclAT_0 | - | - |
| - () | 58535..58720 | + | 186 | NuclAT_0 | - | - |
| - () | 58535..58720 | + | 186 | NuclAT_0 | - | - |
| G6P89_RS26320 () | 58786..58947 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| G6P89_RS26325 () | 59185..59544 | - | 360 | WP_024195277.1 | hypothetical protein | - |
| G6P89_RS26330 () | 59844..60140 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| G6P89_RS26335 () | 60251..61072 | + | 822 | WP_165696594.1 | DUF945 domain-containing protein | - |
| G6P89_RS26340 () | 61369..62016 | - | 648 | WP_072144024.1 | hypothetical protein | VF |
| G6P89_RS26345 () | 62292..62675 | + | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| G6P89_RS26350 () | 62867..63514 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| G6P89_RS26355 () | 63622..63861 | + | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| G6P89_RS26360 () | 63895..64257 | + | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| G6P89_RS26365 () | 64272..64583 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| G6P89_RS26370 () | 64605..65171 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| G6P89_RS26375 () | 65158..65886 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| G6P89_RS26380 () | 65886..67337 | + | 1452 | WP_016235429.1 | conjugal transfer protein TraB | - |
| G6P89_RS26385 () | 67306..67893 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| G6P89_RS26390 () | 67847..68197 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| G6P89_RS26395 () | 68197..68712 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G6P89_RS26400 () | 68847..69068 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| G6P89_RS26405 () | 69061..69474 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| G6P89_RS26410 () | 69467..69940 | + | 474 | WP_016249716.1 | hypothetical protein | - |
| G6P89_RS26415 () | 70021..70239 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| G6P89_RS26420 () | 70267..70614 | + | 348 | WP_000836682.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|