MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 140737 bp
Accession: NZ_CP049039 Location: 1..140737 Organism: Pseudohalocynthiibacter aestuariivivens strain RR4-35 Replicon: plasmid pRR4-35_2
Accession: NZ_CP049039 Location: 1..140737 Organism: Pseudohalocynthiibacter aestuariivivens strain RR4-35 Replicon: plasmid pRR4-35_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5B38_RS19565 () | 1958..3460 | + | 1503 | WP_165198334.1 | oligosaccharide flippase family protein | - |
| G5B38_RS19570 () | 3484..4323 | - | 840 | WP_165198335.1 | SDR family oxidoreductase | - |
| G5B38_RS19575 () | 4320..5027 | - | 708 | WP_165198336.1 | CMP-N,N'-diacetyllegionaminic acid synthase | VF |
| G5B38_RS19580 () | 5024..5938 | - | 915 | WP_165198337.1 | Gfo/Idh/MocA family oxidoreductase | - |
| G5B38_RS19585 () | 6362..6703 | - | 342 | Protein_5 | adenylyl-sulfate kinase | - |
| G5B38_RS19590 () | 6793..7734 | - | 942 | WP_165198338.1 | TniQ family protein | - |
| G5B38_RS19595 () | 7731..8597 | - | 867 | WP_165198339.1 | TniB family NTP-binding protein | - |
| G5B38_RS19600 () | 8566..10083 | - | 1518 | WP_165198340.1 | DDE-type integrase/transposase/recombinase | - |
| G5B38_RS19605 () | 10154..10450 | - | 297 | WP_165198341.1 | hypothetical protein | - |
| G5B38_RS19610 () | 10450..12085 | - | 1636 | Protein_10 | IS66 family transposase ISPpa5 | Transposase |
| G5B38_RS19615 () | 12148..12441 | - | 294 | WP_165198342.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| G5B38_RS19620 () | 12492..12872 | - | 381 | WP_165198343.1 | transposase | - |
| G5B38_RS19625 () | 12993..13704 | - | 712 | Protein_13 | IS6 family transposase ISPpa9 | Transposase |
| G5B38_RS19630 () | 13860..14471 | - | 612 | WP_165198440.1 | SMC-Scp complex subunit ScpB | - |
| G5B38_RS19635 () | 14477..15430 | - | 954 | WP_165198344.1 | DUF1403 family protein | - |
| G5B38_RS19640 () | 15576..16637 | - | 1062 | WP_165198345.1 | TniQ family protein | - |
| G5B38_RS19645 () | 16634..17578 | - | 945 | WP_165198346.1 | TniB family NTP-binding protein | - |
| G5B38_RS19650 () | 17569..19215 | - | 1647 | WP_165198348.1 | DDE-type integrase/transposase/recombinase | - |
| G5B38_RS19655 () | 19316..20407 | + | 1092 | WP_206295799.1 | tyrosine-type recombinase/integrase | - |
| G5B38_RS19660 () | 20412..20735 | - | 324 | WP_165198350.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G5B38_RS19665 () | 20722..20967 | - | 246 | WP_165198351.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| G5B38_RS19670 () | 21089..21970 | + | 882 | WP_165198352.1 | Tn3 family transposase ISPsy42 | Transposase |
| G5B38_RS19675 () | 22253..23440 | + | 1188 | WP_165198353.1 | Sporulation initiation inhibitor protein Soj | VF |
| G5B38_RS19680 () | 23440..24510 | + | 1071 | WP_165198355.1 | plasmid partitioning protein RepB | - |
| G5B38_RS19685 () | 24666..25715 | + | 1050 | WP_165198356.1 | replication protein C | - |
| G5B38_RS19690 () | 25834..26317 | + | 484 | Protein_26 | DNA-binding protein | - |
| G5B38_RS19695 () | 26467..26736 | + | 270 | WP_165198441.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| G5B38_RS19700 () | 26789..27145 | + | 357 | WP_009820215.1 | hypothetical protein | - |
| G5B38_RS19705 () | 27174..27467 | - | 294 | WP_050525478.1 | hypothetical protein | - |
| G5B38_RS19710 () | 27819..28304 | + | 486 | WP_165198358.1 | hypothetical protein | - |
| G5B38_RS19715 () | 28345..29283 | + | 939 | WP_165198359.1 | DUF1738 domain-containing protein | - |
| G5B38_RS19720 () | 29307..29516 | + | 210 | WP_165198442.1 | hypothetical protein | - |
| G5B38_RS19725 () | 29711..30742 | + | 1032 | WP_165198112.1 | IS110 family transposase ISRhru3 | Transposase |
| G5B38_RS19730 () | 31163..31552 | + | 390 | WP_099911371.1 | DUF3768 domain-containing protein | - |
| G5B38_RS19735 () | 31708..33690 | + | 1983 | WP_165198110.1 | ParB/RepB/Spo0J family partition protein | - |
| G5B38_RS19740 () | 33763..34356 | + | 594 | WP_025042408.1 | hypothetical protein | - |
| G5B38_RS19745 () | 34459..35112 | + | 654 | WP_165198361.1 | hypothetical protein | - |
| G5B38_RS19750 () | 35237..35563 | + | 327 | WP_165198362.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| G5B38_RS19755 () | 35560..36078 | + | 519 | WP_165198363.1 | type II toxin-antitoxin system YhaV family toxin | - |
| G5B38_RS19760 () | 36405..37124 | - | 720 | WP_165198364.1 | hypothetical protein | - |
| G5B38_RS19765 () | 37285..38157 | + | 873 | WP_165198443.1 | LysR family transcriptional regulator | - |
| G5B38_RS19770 () | 38523..39554 | + | 1032 | WP_165198112.1 | IS110 family transposase ISRhru3 | Transposase |
| G5B38_RS19775 () | 39980..44242 | + | 4263 | WP_165198366.1 | strawberry notch family protein | - |
| G5B38_RS19780 () | 44364..44750 | + | 387 | WP_165198367.1 | hypothetical protein | - |
| G5B38_RS19785 () | 44752..45213 | + | 462 | WP_165198444.1 | hypothetical protein | - |
| G5B38_RS19790 () | 45314..45616 | + | 303 | WP_165198368.1 | hypothetical protein | - |
| G5B38_RS19795 () | 45741..46469 | + | 729 | WP_165198369.1 | DUF736 family protein | - |
| G5B38_RS19800 () | 46755..47162 | + | 408 | WP_165198445.1 | hypothetical protein | - |
| G5B38_RS19805 () | 47311..47892 | + | 582 | WP_165198446.1 | rhomboid family intramembrane serine protease | - |
| G5B38_RS19810 () | 48135..48923 | + | 789 | WP_165198370.1 | hypothetical protein | - |
| G5B38_RS19815 () | 48916..52263 | + | 3348 | WP_165198372.1 | DEAD/DEAH box helicase | - |
| G5B38_RS19820 () | 53020..54531 | - | 1512 | WP_165192004.1 | IS66 family transposase ISUnCu14 | Transposase |
| G5B38_RS19825 () | 54587..54940 | - | 354 | WP_165192003.1 | IS66 family transposase ISUnCu14 | Transposase |
| G5B38_RS19830 () | 54937..55323 | - | 387 | WP_165192002.1 | IS66 family transposase ISUnCu14 | Transposase |
| G5B38_RS19835 () | 55409..56275 | + | 867 | Protein_55 | DUF2493 domain-containing protein | - |
| G5B38_RS19840 () | 56398..57423 | + | 1026 | WP_165198447.1 | hypothetical protein | - |
| G5B38_RS19850 () | 58064..58270 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| G5B38_RS19855 () | 58833..59426 | + | 594 | WP_165198373.1 | transposase | - |
| G5B38_RS19860 () | 59413..61746 | + | 2334 | WP_165198374.1 | T-DNA border endonuclease VirD2 | Relaxase |
| G5B38_RS19865 () | 61755..63755 | + | 2001 | WP_165198375.1 | Protein VirD4 | VF |
| G5B38_RS19870 () | 64268..64969 | + | 702 | Protein_61 | molybdopterin-guanine dinucleotide biosynthesis protein MobA | - |
| G5B38_RS19875 () | 64947..65276 | + | 330 | WP_165198377.1 | hypothetical protein | - |
| G5B38_RS19880 () | 65363..66502 | - | 1140 | WP_165198378.1 | PHB depolymerase family esterase | - |
| G5B38_RS19885 () | 66684..67679 | - | 996 | WP_165198448.1 | fatty acid desaturase | - |
| G5B38_RS19890 () | 67754..67993 | - | 240 | WP_165198379.1 | hypothetical protein | - |
| G5B38_RS19895 () | 68109..68345 | - | 237 | WP_165198380.1 | hypothetical protein | - |
| G5B38_RS19900 () | 68542..69273 | + | 732 | WP_165198382.1 | Crp/Fnr family transcriptional regulator | - |
| G5B38_RS19905 () | 69333..69527 | - | 195 | WP_165198384.1 | hypothetical protein | - |
| G5B38_RS19910 () | 69972..71222 | + | 1251 | WP_165198385.1 | PAS domain-containing protein | - |
| G5B38_RS19915 () | 71234..72517 | - | 1284 | WP_165198449.1 | DUF2254 domain-containing protein | - |
| G5B38_RS19920 () | 72929..73873 | - | 945 | WP_165198386.1 | PHB depolymerase family esterase | - |
| G5B38_RS19925 () | 74399..74824 | - | 426 | WP_165198387.1 | hypothetical protein | - |
| G5B38_RS19930 () | 75233..75610 | + | 378 | Protein_73 | hypothetical protein | - |
| G5B38_RS19935 () | 75977..76783 | + | 807 | WP_206295800.1 | transglutaminase family protein | - |
| G5B38_RS19945 () | 77130..77663 | + | 534 | WP_165198390.1 | hypothetical protein | - |
| G5B38_RS19950 () | 77925..78851 | + | 927 | WP_165198392.1 | transglutaminase family protein | - |
| G5B38_RS19955 () | 79001..80077 | - | 1077 | WP_165198394.1 | type IV secretion system protein | - |
| G5B38_RS19960 () | 80090..80500 | - | 411 | WP_165198396.1 | hypothetical protein | - |
| G5B38_RS19965 () | 80497..80691 | - | 195 | WP_165198397.1 | hypothetical protein | - |
| G5B38_RS19970 () | 80688..81674 | - | 987 | WP_165198398.1 | Type IV secretion system protein VirB11 | VF |
| G5B38_RS19975 () | 81679..83058 | - | 1380 | WP_165198399.1 | Type IV secretion system protein PtlG | VF |
| G5B38_RS19980 () | 83055..83750 | - | 696 | WP_165198400.1 | Type IV secretion system protein virB9 | VF |
| G5B38_RS19985 () | 83753..84409 | - | 657 | WP_165198401.1 | type IV secretion system protein | - |
| G5B38_RS19990 () | 84424..85233 | - | 810 | WP_165198451.1 | conjugal transfer protein TraF | - |
| G5B38_RS19995 () | 85233..86387 | - | 1155 | WP_206295797.1 | transglycosylase SLT domain-containing protein | - |
| G5B38_RS20000 () | 86377..86646 | - | 270 | WP_165198333.1 | hypothetical protein | - |
| G5B38_RS20005 () | 86643..89006 | - | 2364 | WP_165198402.1 | type IV secretion system DNA-binding domain-containing protein | - |
| G5B38_RS20010 () | 88996..89274 | - | 279 | WP_012187324.1 | hypothetical protein | VF |
| G5B38_RS20015 () | 89267..89560 | - | 294 | WP_008282963.1 | Type IV secretion system protein virB2 | VF |
| G5B38_RS20020 () | 89557..90171 | - | 615 | WP_165198403.1 | lytic transglycosylase domain-containing protein | - |
| G5B38_RS20025 () | 90215..90568 | - | 354 | WP_165198404.1 | hypothetical protein | - |
| G5B38_RS20030 () | 90780..91031 | + | 252 | WP_165198453.1 | hypothetical protein | - |
| G5B38_RS20035 () | 91156..91413 | + | 258 | WP_165198405.1 | helix-turn-helix transcriptional regulator | - |
| G5B38_RS20040 () | 91581..91820 | + | 240 | WP_165198406.1 | hypothetical protein | - |
| G5B38_RS20045 () | 91927..92448 | - | 522 | WP_165198454.1 | hypothetical protein | - |
| G5B38_RS20050 () | 93474..94624 | - | 1151 | Protein_96 | IS3 family transposase ISXau3 | Transposase |
| G5B38_RS20055 () | 94681..95226 | - | 546 | WP_165198407.1 | hypothetical protein | - |
| G5B38_RS20060 () | 95404..95541 | + | 138 | WP_165198408.1 | hypothetical protein | - |
| G5B38_RS20065 () | 95541..95717 | + | 177 | WP_165198409.1 | NAD(P)-binding domain-containing protein | - |
| G5B38_RS20070 () | 95831..96007 | + | 177 | WP_165198410.1 | hypothetical protein | - |
| G5B38_RS20075 () | 96056..96856 | - | 801 | WP_165198411.1 | N-acetylmuramate alpha-1-phosphate uridylyltransferase | VF |
| G5B38_RS20080 () | 96853..97464 | - | 612 | WP_165198412.1 | Anthranilate synthase component 2 | VF |
| G5B38_RS20085 () | 97464..100562 | - | 3099 | WP_165198413.1 | sugar metabolism cluster protein | - |
| G5B38_RS20090 () | 100600..101832 | - | 1233 | WP_165198414.1 | hypothetical protein | - |
| G5B38_RS20095 () | 102721..104478 | - | 1758 | WP_165198415.1 | DUF2793 domain-containing protein | - |
| G5B38_RS20100 () | 104625..106748 | - | 2124 | WP_165198416.1 | polysaccharide biosynthesis tyrosine autokinase | - |
| G5B38_RS20105 () | 107323..107895 | + | 573 | WP_165198417.1 | putative sugar transferase EpsL | VF |
| G5B38_RS20110 () | 108021..109151 | - | 1131 | WP_165198418.1 | UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing) | VF |
| G5B38_RS20115 () | 109148..109828 | - | 681 | WP_165198419.1 | CMP-N,N'-diacetyllegionaminic acid synthase | VF |
| G5B38_RS20120 () | 109962..111458 | + | 1497 | WP_165198420.1 | hypothetical protein | - |
| G5B38_RS20125 () | 111491..112495 | + | 1005 | WP_165198421.1 | hypothetical protein | - |
| G5B38_RS20130 () | 112533..113195 | + | 663 | WP_165198422.1 | putative sugar transferase EpsL | VF |
| G5B38_RS20135 () | 113234..114289 | - | 1056 | WP_165198423.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| G5B38_RS20140 () | 114317..115138 | - | 822 | WP_165198424.1 | aldolase | - |
| G5B38_RS20145 () | 115157..116974 | - | 1818 | WP_165198425.1 | Asparagine synthetase [glutamine-hydrolyzing] 1 | VF |
| G5B38_RS20150 () | 116980..118125 | - | 1146 | WP_165198455.1 | Putative pyridoxal phosphate-dependent aminotransferase EpsN | VF |
| G5B38_RS20155 () | 119137..120459 | + | 1323 | WP_165198426.1 | hypothetical protein | VF |
| G5B38_RS20160 () | 120471..121232 | + | 762 | WP_165198427.1 | imidazole glycerol phosphate synthase cyclase subunit | - |
| G5B38_RS20165 () | 121236..121859 | + | 624 | WP_165198428.1 | NeuD/PglB/VioB family sugar acetyltransferase | - |
| G5B38_RS20170 () | 121880..122524 | + | 645 | WP_165198429.1 | imidazole glycerol phosphate synthase subunit HisH | - |
| G5B38_RS20175 () | 122521..123777 | + | 1257 | WP_165198430.1 | UDP-glycosyltransferase | - |
| G5B38_RS20180 () | 124100..125455 | + | 1356 | WP_165198431.1 | polysaccharide biosynthesis/export family protein | - |
| G5B38_RS20185 () | 125666..126370 | - | 705 | WP_165198432.1 | YjbF family lipoprotein | - |
| G5B38_RS20190 () | 126367..128487 | - | 2121 | WP_165198433.1 | YjbH domain-containing protein | - |
| G5B38_RS20195 () | 128997..130568 | - | 1572 | WP_165198434.1 | Linear gramicidin synthase subunit D | VF |
| G5B38_RS20200 () | 130624..131736 | - | 1113 | WP_165198435.1 | class I SAM-dependent methyltransferase | - |
| G5B38_RS20205 () | 131740..132894 | - | 1155 | WP_165198436.1 | acyl-CoA dehydrogenase family protein | - |
| G5B38_RS20210 () | 132920..133174 | - | 255 | WP_165198437.1 | acyl carrier protein | - |
| G5B38_RS20215 () | 133200..134345 | - | 1146 | WP_206295798.1 | HupE/UreJ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|