MGE detailed information
MGE type: Prophage MGE length: 39897 bp
Accession: NZ_CP048934 Location: 672638..712534 Organism: Escherichia coli strain 190693 Replicon: chromosome
Accession: NZ_CP048934 Location: 672638..712534 Organism: Escherichia coli strain 190693 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C00_RS03290 () | 668494..669294 | + | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
| G5C00_RS03295 () | 669307..670158 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G5C00_RS03300 () | 670213..670671 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| G5C00_RS03305 () | 671100..671666 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G5C00_RS03310 () | 671663..672472 | - | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G5C00_RS03315 () | 672638..672847 | - | 210 | WP_160515929.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G5C00_RS03320 () | 672860..673003 | - | 144 | WP_001295496.1 | YobF family protein | - |
| G5C00_RS03325 () | 673673..673960 | - | 288 | WP_001006855.1 | YebO family protein | - |
| G5C00_RS03330 () | 674035..674178 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G5C00_RS03335 () | 674337..674576 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| G5C00_RS03340 () | 674720..675511 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| G5C00_RS03345 () | 675688..677061 | + | 1374 | WP_001551227.1 | MFS transporter | - |
| G5C00_RS03350 () | 677107..677988 | - | 882 | WP_000984517.1 | protease HtpX | - |
| G5C00_RS03355 () | 678180..680228 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| G5C00_RS03360 () | 680248..680946 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| G5C00_RS03365 () | 681043..681540 | - | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| G5C00_RS03370 () | 681670..682953 | + | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| G5C00_RS03375 () | 682922..685555 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| G5C00_RS03380 () | 685635..687074 | + | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G5C00_RS03385 () | 687192..687428 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| G5C00_RS03390 () | 687533..687724 | + | 192 | WP_001296140.1 | YebW family protein | - |
| G5C00_RS03395 () | 687725..688381 | - | 657 | WP_163510366.1 | protein-serine/threonine phosphatase | - |
| - () | 688478..688749 | + | 272 | - | - | Antitoxin Detail |
| - () | 688516..688619 | - | 104 | - | - | Toxin Detail |
| G5C00_RS03400 () | 688777..689118 | - | 342 | WP_000976472.1 | YebY family protein | - |
| G5C00_RS03405 () | 689131..690003 | - | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| G5C00_RS03410 () | 690007..690381 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| G5C00_RS03415 () | 690520..690750 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G5C00_RS03420 () | 690852..691508 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| G5C00_RS03425 () | 691532..692194 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G5C00_RS03430 () | 692191..694251 | - | 2061 | WP_001551233.1 | oligopeptidase B | - |
| G5C00_RS03435 () | 694408..694833 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| G5C00_RS03440 () | 694890..696059 | + | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| G5C00_RS03445 () | 696223..696882 | - | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| G5C00_RS03450 () | 697209..697565 | - | 357 | WP_001295500.1 | protein YebF | - |
| G5C00_RS03455 () | 697632..697922 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G5C00_RS03460 () | 698056..699234 | + | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G5C00_RS03465 () | 699289..699930 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G5C00_RS03470 () | 699967..701778 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| G5C00_RS03475 () | 702013..703488 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| G5C00_RS03480 () | 703826..704695 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| G5C00_RS03485 () | 704823..706265 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| G5C00_RS03490 () | 706397..707368 | - | 972 | WP_001551238.1 | hypothetical protein | VF |
| G5C00_RS03495 () | 707488..708810 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| G5C00_RS03500 () | 708826..709758 | - | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| G5C00_RS03505 () | 709837..710592 | + | 756 | WP_000202996.1 | hypothetical protein | VF |
| G5C00_RS03510 () | 710589..711374 | + | 786 | WP_000571479.1 | hypothetical protein | VF |
| G5C00_RS03515 () | 711524..712534 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| G5C00_RS03520 () | 712543..713154 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| G5C00_RS03525 () | 713293..713358 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| G5C00_RS03530 () | 713429..714031 | + | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| G5C00_RS03535 () | 714033..714554 | - | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| G5C00_RS03540 () | 714589..715329 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| G5C00_RS03545 () | 715358..715810 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|