MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 34255 bp
Accession: NZ_CP048929 Location: 1566225..1600479 Organism: Neisseria gonorrhoeae strain CT213 Replicon: chromosome
Accession: NZ_CP048929 Location: 1566225..1600479 Organism: Neisseria gonorrhoeae strain CT213 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S46_RS07985 (G5S46_07885) | 1561681..1563099 | - | 1419 | WP_003689535.1 | type I glutamate--ammonia ligase | - |
| G5S46_RS07995 (G5S46_07895) | 1563410..1564219 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| G5S46_RS08000 (G5S46_07900) | 1564222..1564923 | + | 702 | WP_003689538.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| G5S46_RS08010 (G5S46_07910) | 1565463..1566197 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| G5S46_RS08015 (G5S46_07915) | 1566268..1566798 | - | 531 | WP_003689542.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| G5S46_RS08020 (G5S46_07920) | 1566779..1567360 | - | 582 | WP_003689544.1 | LPS export ABC transporter periplasmic protein LptC | - |
| G5S46_RS08025 (G5S46_07925) | 1567357..1567893 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| G5S46_RS08030 (G5S46_07930) | 1567959..1568933 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| G5S46_RS08035 (G5S46_07935) | 1569030..1570085 | + | 1056 | WP_003689551.1 | transaldolase | - |
| G5S46_RS12135 | 1570097..1570231 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| G5S46_RS08040 (G5S46_07940) | 1570236..1570526 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| G5S46_RS08045 (G5S46_07945) | 1570543..1571430 | + | 888 | WP_003689554.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| G5S46_RS08050 (G5S46_07950) | 1571500..1572516 | - | 1017 | WP_003689555.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| G5S46_RS08055 (G5S46_07955) | 1572636..1573790 | + | 1155 | WP_047919675.1 | hypothetical protein ; Integrase | Integrase |
| G5S46_RS08060 (G5S46_07960) | 1573840..1574106 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| G5S46_RS08065 (G5S46_07965) | 1574214..1575362 | - | 1149 | WP_010951305.1 | hypothetical protein | - |
| G5S46_RS08070 (G5S46_07970) | 1575359..1576342 | - | 984 | WP_050170976.1 | hypothetical protein | - |
| G5S46_RS08075 (G5S46_07975) | 1576453..1576668 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| G5S46_RS08080 (G5S46_07980) | 1576720..1577211 | - | 492 | WP_047926688.1 | siphovirus Gp157 family protein | - |
| G5S46_RS08085 (G5S46_07985) | 1577208..1577390 | - | 183 | WP_003691535.1 | hypothetical protein | - |
| G5S46_RS08090 (G5S46_07990) | 1577530..1578216 | - | 687 | WP_042758540.1 | hypothetical protein | - |
| G5S46_RS08095 | 1578285..1578446 | - | 162 | WP_004464809.1 | hypothetical protein | - |
| G5S46_RS08100 (G5S46_07995) | 1578443..1578718 | - | 276 | WP_010359972.1 | hypothetical protein | - |
| G5S46_RS08105 (G5S46_08000) | 1578873..1579205 | - | 333 | WP_003687946.1 | hypothetical protein | - |
| G5S46_RS08110 (G5S46_08005) | 1579347..1579616 | - | 270 | WP_219501095.1 | hypothetical protein | - |
| G5S46_RS08115 (G5S46_08010) | 1579613..1580089 | - | 477 | WP_002255718.1 | hypothetical protein | - |
| G5S46_RS08120 (G5S46_08015) | 1580122..1580322 | - | 201 | WP_003704298.1 | hypothetical protein | - |
| G5S46_RS08125 (G5S46_08020) | 1580533..1581294 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| G5S46_RS08130 (G5S46_08025) | 1581393..1581794 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| G5S46_RS08135 (G5S46_08030) | 1581896..1582078 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| G5S46_RS08140 (G5S46_08035) | 1582248..1583066 | - | 819 | WP_012503752.1 | DUF3037 domain-containing protein | - |
| G5S46_RS08145 (G5S46_08040) | 1583063..1583761 | - | 699 | WP_003689139.1 | hypothetical protein | - |
| G5S46_RS08150 (G5S46_08045) | 1584000..1584710 | - | 711 | WP_050161643.1 | helix-turn-helix transcriptional regulator | - |
| G5S46_RS08155 (G5S46_08050) | 1584826..1585014 | + | 189 | WP_003689136.1 | helix-turn-helix domain-containing protein | - |
| G5S46_RS08160 | 1585094..1585249 | + | 156 | WP_123788359.1 | hypothetical protein | - |
| G5S46_RS08165 (G5S46_08055) | 1585226..1585414 | - | 189 | WP_219501097.1 | hypothetical protein | - |
| G5S46_RS08170 (G5S46_08060) | 1585587..1585814 | + | 228 | WP_003698261.1 | helix-turn-helix domain-containing protein | - |
| G5S46_RS12140 | 1586493..1586996 | + | 504 | WP_010360005.1 | hypothetical protein | - |
| G5S46_RS08180 (G5S46_08070) | 1586993..1588354 | + | 1362 | WP_050161657.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| G5S46_RS08185 (G5S46_08075) | 1588371..1588616 | + | 246 | WP_082295519.1 | hypothetical protein | - |
| G5S46_RS08190 (G5S46_08080) | 1588690..1589184 | + | 495 | WP_047923539.1 | DUF3310 domain-containing protein | - |
| G5S46_RS08195 | 1589361..1589510 | + | 150 | WP_012503493.1 | hypothetical protein | - |
| G5S46_RS12145 | 1589539..1589820 | + | 282 | WP_003689109.1 | hypothetical protein | - |
| G5S46_RS08200 (G5S46_08085) | 1589811..1590191 | + | 381 | WP_017147222.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G5S46_RS12150 | 1590208..1590336 | - | 129 | WP_017147221.1 | hypothetical protein | - |
| G5S46_RS08205 (G5S46_08090) | 1590520..1591482 | - | 963 | WP_219501071.1 | IS110 family transposase ISNgo2 | Transposase |
| G5S46_RS08210 (G5S46_08095) | 1591996..1592355 | - | 360 | WP_003689732.1 | hypothetical protein | - |
| G5S46_RS08215 (G5S46_08100) | 1592476..1593562 | - | 1087 | Protein_1636 | zonular occludens toxin domain-containing protein | - |
| G5S46_RS08220 (G5S46_08105) | 1593572..1593862 | - | 291 | WP_003689734.1 | DUF2523 domain-containing protein | - |
| G5S46_RS08225 (G5S46_08110) | 1593863..1595434 | - | 1572 | WP_219501059.1 | IgG-binding virulence factor TspB family protein | - |
| G5S46_RS08230 (G5S46_08115) | 1595376..1595693 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| G5S46_RS08235 (G5S46_08120) | 1595821..1596099 | - | 279 | WP_003691583.1 | hypothetical protein | - |
| G5S46_RS08240 (G5S46_08125) | 1596106..1596324 | - | 219 | WP_003691584.1 | major capsid protein | - |
| G5S46_RS08245 (G5S46_08130) | 1596410..1596613 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| G5S46_RS08250 (G5S46_08135) | 1596627..1596938 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| G5S46_RS08255 (G5S46_08140) | 1596952..1598238 | - | 1287 | WP_003691767.1 | replication initiation factor domain-containing protein | - |
| G5S46_RS08260 (G5S46_08145) | 1598267..1598491 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| G5S46_RS08265 (G5S46_08150) | 1598887..1599093 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| G5S46_RS08270 (G5S46_08155) | 1599188..1600357 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| G5S46_RS08275 (G5S46_08160) | 1600503..1601273 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| G5S46_RS08280 (G5S46_08165) | 1601375..1601626 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| G5S46_RS08285 (G5S46_08170) | 1601678..1602484 | + | 807 | WP_003691772.1 | basic amino acid ABC transporter substrate-binding protein | - |
| G5S46_RS08290 (G5S46_08175) | 1602791..1604314 | + | 1524 | Protein_1651 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|