MGE detailed information
MGE type: Prophage MGE length: 59023 bp
Accession: NZ_CP048915 Location: 1951146..2010168 Organism: Escherichia coli strain E2 Replicon: chromosome
Accession: NZ_CP048915 Location: 1951146..2010168 Organism: Escherichia coli strain E2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S48_RS09310 () | 1947564..1948535 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| G5S48_RS09315 () | 1948532..1949275 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| G5S48_RS09320 () | 1949316..1949711 | - | 396 | WP_001356287.1 | MAPEG family protein | - |
| G5S48_RS09325 () | 1949764..1950111 | - | 348 | Protein_1823 | DUF72 domain-containing protein | - |
| G5S48_RS09330 () | 1951146..1951670 | - | 525 | WP_000258747.1 | AP2/ERF family transcription factor | - |
| G5S48_RS09335 () | 1953247..1953804 | + | 558 | WP_023147813.1 | hypothetical protein | - |
| G5S48_RS09340 () | 1953805..1954083 | + | 279 | WP_001753400.1 | hypothetical protein | - |
| G5S48_RS09345 () | 1954083..1954298 | + | 216 | WP_001681135.1 | hypothetical protein | - |
| G5S48_RS09350 () | 1954295..1954582 | + | 288 | WP_000805963.1 | HNH endonuclease | - |
| G5S48_RS09355 () | 1954738..1955061 | + | 324 | WP_001678977.1 | hypothetical protein | - |
| G5S48_RS09360 () | 1955600..1956310 | + | 711 | WP_001681134.1 | hypothetical protein | - |
| G5S48_RS09365 () | 1956319..1956627 | + | 309 | WP_001678975.1 | hypothetical protein | - |
| G5S48_RS09370 () | 1956653..1956856 | + | 204 | WP_001678974.1 | hypothetical protein | - |
| G5S48_RS09375 () | 1957015..1958835 | + | 1821 | WP_224289224.1 | tape measure protein | - |
| G5S48_RS09385 () | 1960079..1960399 | + | 321 | Protein_1835 | phage tail tape measure protein | - |
| G5S48_RS09390 () | 1960557..1961330 | + | 774 | WP_001678972.1 | hypothetical protein | - |
| G5S48_RS09395 () | 1961988..1963529 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| G5S48_RS09400 () | 1963544..1964290 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| G5S48_RS09405 () | 1964375..1965454 | - | 1080 | Protein_1839 | hypothetical protein ; Integrase | Integrase |
| G5S48_RS09410 () | 1965525..1966001 | - | 477 | Protein_1840 | DUF72 domain-containing protein | - |
| G5S48_RS09415 () | 1965998..1966564 | - | 567 | WP_000891618.1 | hydrolase | - |
| G5S48_RS09420 () | 1966874..1968646 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| G5S48_RS09425 () | 1968764..1969216 | + | 453 | WP_001443602.1 | dihydroneopterin triphosphate diphosphatase | - |
| G5S48_RS09430 () | 1969245..1969985 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| G5S48_RS09435 () | 1970020..1970541 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| G5S48_RS09440 () | 1970543..1971145 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| G5S48_RS09445 () | 1971216..1971281 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| G5S48_RS09450 () | 1971420..1972031 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| G5S48_RS09455 () | 1972040..1973050 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| G5S48_RS09460 () | 1973197..1973982 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| G5S48_RS09465 () | 1973979..1974734 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| G5S48_RS09470 () | 1974813..1975745 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| G5S48_RS09475 () | 1975761..1977083 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| G5S48_RS09480 () | 1977203..1978174 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| G5S48_RS09485 () | 1978305..1979747 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| G5S48_RS09490 () | 1979875..1980744 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| G5S48_RS09495 () | 1981082..1982557 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| G5S48_RS09500 () | 1982792..1984603 | + | 1812 | WP_060621242.1 | phosphogluconate dehydratase | - |
| G5S48_RS09505 () | 1984640..1985281 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G5S48_RS09510 () | 1985337..1986515 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G5S48_RS09515 () | 1986649..1986939 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G5S48_RS09520 () | 1987006..1987362 | + | 357 | WP_001295500.1 | protein YebF | - |
| G5S48_RS09525 () | 1987689..1988348 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| G5S48_RS09530 () | 1988557..1990617 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| G5S48_RS09535 () | 1990614..1991276 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G5S48_RS09540 () | 1991300..1991956 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| G5S48_RS09545 () | 1992058..1992288 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G5S48_RS09550 () | 1992427..1992801 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| G5S48_RS09555 () | 1992805..1993677 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| G5S48_RS09560 () | 1993690..1994031 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - | 1994059..1994330 | - | 272 | - | - | Antitoxin Detail |
| - | 1994189..1994292 | + | 104 | - | - | Toxin Detail |
| G5S48_RS09565 () | 1994427..1995083 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| G5S48_RS09570 () | 1995084..1995275 | - | 192 | WP_001296140.1 | YebW family protein | - |
| G5S48_RS09575 () | 1995380..1995616 | - | 237 | WP_001295499.1 | YebV family protein | - |
| G5S48_RS09580 () | 1995734..1997173 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G5S48_RS09585 () | 1997253..1999886 | - | 2634 | WP_001356288.1 | hypothetical protein | VF |
| G5S48_RS09590 () | 1999855..2001138 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| G5S48_RS09595 () | 2001268..2001765 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
| G5S48_RS09600 () | 2001862..2002560 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| G5S48_RS09605 () | 2002580..2004628 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| G5S48_RS09610 () | 2004820..2005701 | + | 882 | WP_000984517.1 | protease HtpX | - |
| G5S48_RS09615 () | 2005747..2007120 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| G5S48_RS09620 () | 2007297..2008088 | + | 792 | WP_001262192.1 | DNA-binding transcriptional regulator KdgR | - |
| G5S48_RS09625 () | 2008231..2008470 | - | 240 | WP_001211011.1 | YobH family protein | - |
| G5S48_RS09630 () | 2008629..2008772 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G5S48_RS09635 () | 2008847..2009134 | + | 288 | WP_001006866.1 | YebO family protein | - |
| G5S48_RS09640 () | 2009803..2009946 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| G5S48_RS09645 () | 2009959..2010168 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G5S48_RS09650 () | 2010334..2011143 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G5S48_RS09655 () | 2011140..2011706 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G5S48_RS09660 () | 2012135..2012593 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| G5S48_RS09665 () | 2012648..2013499 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G5S48_RS09670 () | 2013512..2014312 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|