MGE detailed information
MGE type: Conjugative plasmid MGE length: 110687 bp
Accession: NZ_CP048824 Location: 1..110687 Organism: Escherichia coli strain QEC11-421 Replicon: plasmid pEcQE11-421-3
Accession: NZ_CP048824 Location: 1..110687 Organism: Escherichia coli strain QEC11-421 Replicon: plasmid pEcQE11-421-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QE11421_RS23870 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| QE11421_RS23875 () | 1984..2171 | + | 188 | Protein_1 | hypothetical protein | - |
| QE11421_RS23880 () | 2469..2792 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| QE11421_RS23885 () | 2897..4030 | + | 1134 | WP_001089726.1 | permease | - |
| QE11421_RS23890 () | 4323..4940 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| QE11421_RS23895 () | 5132..6688 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| QE11421_RS23900 () | 6951..7541 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| QE11421_RS23905 () | 7541..7798 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| QE11421_RS23910 () | 8152..10290 | + | 2139 | WP_000350639.1 | AAA family ATPase | - |
| QE11421_RS23915 () | 10536..11372 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QE11421_RS23920 () | 11372..12175 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QE11421_RS23925 () | 12575..14011 | - | 1437 | WP_000105382.1 | glutathione synthase | - |
| QE11421_RS23930 () | 14179..14883 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QE11421_RS23935 () | 14874..15644 | + | 771 | WP_079802168.1 | Murein DD-endopeptidase MepM | VF |
| QE11421_RS23940 () | 15678..15875 | - | 198 | WP_000843501.1 | DUF2933 domain-containing protein | - |
| QE11421_RS23945 () | 15916..18393 | - | 2478 | WP_011251358.1 | Ag(+)-translocating P-type ATPase SilP | - |
| QE11421_RS23950 () | 18491..18931 | - | 441 | WP_000758221.1 | hypothetical protein | - |
| QE11421_RS23955 () | 19018..22164 | - | 3147 | WP_011251357.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| QE11421_RS23960 () | 22175..23467 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| QE11421_RS23965 () | 23581..23934 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| QE11421_RS23970 () | 23962..25347 | - | 1386 | WP_000475509.1 | Cation efflux system protein CusC | VF |
| QE11421_RS23975 () | 25537..26217 | + | 681 | WP_000697965.1 | Transcriptional regulatory protein CusR | VF |
| QE11421_RS23980 () | 26210..27685 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| QE11421_RS23985 () | 27936..28367 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| QE11421_RS23990 () | 28511..28861 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| QE11421_RS23995 () | 29249..30157 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| QE11421_RS24000 () | 30795..31769 | + | 975 | WP_011251353.1 | sensor domain-containing diguanylate cyclase | - |
| QE11421_RS24005 () | 32337..32750 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| QE11421_RS24010 () | 32752..33531 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| QE11421_RS24015 () | 33710..34354 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QE11421_RS24020 () | 34441..34749 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QE11421_RS24025 () | 35163..36143 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QE11421_RS24030 () | 36136..36552 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QE11421_RS24035 () | 36554..37828 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| QE11421_RS24040 () | 37828..38265 | - | 438 | WP_015059343.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QE11421_RS24045 () | 38262..38510 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QE11421_RS24050 () | 38928..39830 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QE11421_RS24055 () | 39827..40138 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QE11421_RS24060 () | 40215..40898 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QE11421_RS24065 () | 40899..41120 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QE11421_RS24070 () | 41132..41566 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| QE11421_RS24075 () | 41617..42387 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| QE11421_RS24080 () | 42928..43230 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| QE11421_RS24085 () | 43277..43699 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| QE11421_RS24090 () | 43696..43887 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QE11421_RS24095 () | 44220..44288 | - | 69 | Protein_45 | pilus protein | - |
| QE11421_RS24100 () | 44335..44536 | - | 202 | Protein_46 | hypothetical protein | - |
| QE11421_RS24105 () | 44657..45184 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| QE11421_RS24110 () | 45242..45475 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| QE11421_RS24115 () | 45534..47492 | + | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| QE11421_RS24120 () | 47547..47981 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QE11421_RS24125 () | 47978..48697 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QE11421_RS24130 () | 48694..49290 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QE11421_RS24135 () | 49753..50253 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| QE11421_RS24140 () | 50982..51416 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QE11421_RS24145 () | 51508..51774 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QE11421_RS24150 () | 51839..52780 | + | 942 | WP_039023393.1 | Recombination-promoting nuclease RpnA | VF |
| QE11421_RS24155 () | 52842..53012 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| QE11421_RS24160 () | 53043..53294 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| QE11421_RS24165 () | 53328..53525 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| QE11421_RS24170 () | 53874..54722 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| QE11421_RS24175 () | 54807..55142 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| QE11421_RS24180 () | 55376..55708 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QE11421_RS24185 () | 55719..58418 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| QE11421_RS24190 () | 58455..60746 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| QE11421_RS24195 () | 60739..61809 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QE11421_RS24200 () | 61828..63036 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 63216..63276 | - | 61 | NuclAT_1 | - | - |
| - () | 63216..63276 | - | 61 | NuclAT_1 | - | - |
| - () | 63216..63276 | - | 61 | NuclAT_1 | - | - |
| - () | 63216..63276 | - | 61 | NuclAT_1 | - | - |
| QE11421_RS24205 () | 63343..64434 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 64637..64699 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64637..64699 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64637..64699 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64637..64699 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QE11421_RS24210 () | 64749..64901 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QE11421_RS24215 () | 64973..65224 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 65611..65662 | - | 52 | NuclAT_2 | - | - |
| - () | 65611..65662 | - | 52 | NuclAT_2 | - | - |
| - () | 65611..65662 | - | 52 | NuclAT_2 | - | - |
| - () | 65611..65662 | - | 52 | NuclAT_2 | - | - |
| QE11421_RS24220 () | 66148..66324 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| QE11421_RS24225 () | 66533..66742 | - | 210 | Protein_71 | hemolysin expression modulator Hha | - |
| QE11421_RS24230 () | 66840..67454 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QE11421_RS24235 () | 67530..69698 | - | 2169 | WP_199266157.1 | DotA/TraY family protein | - |
| QE11421_RS24240 () | 69795..70379 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QE11421_RS24245 () | 70408..71610 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| QE11421_RS24250 () | 71577..72191 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QE11421_RS24255 () | 72191..75235 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| QE11421_RS24260 () | 75325..76125 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QE11421_RS24265 () | 76109..76297 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QE11421_RS24270 () | 76361..76765 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QE11421_RS24275 () | 76816..77343 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QE11421_RS24280 () | 77343..78047 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QE11421_RS24285 () | 78047..79336 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| QE11421_RS24290 () | 79339..80322 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| QE11421_RS24295 () | 80333..81025 | - | 693 | WP_199266158.1 | DotI/IcmL family type IV secretion protein | - |
| QE11421_RS24300 () | 81022..81369 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QE11421_RS24305 () | 81387..85154 | - | 3768 | WP_001141539.1 | DNA primase | - |
| QE11421_RS24310 () | 85244..85795 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QE11421_RS24315 () | 85810..86100 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QE11421_RS24320 () | 86097..87245 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QE11421_RS24325 () | 87242..88060 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QE11421_RS24330 () | 88057..88515 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QE11421_RS24335 () | 88910..89494 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QE11421_RS24340 () | 89554..90756 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QE11421_RS24345 () | 90842..91666 | - | 825 | WP_199266159.1 | conjugal transfer protein TraE | - |
| QE11421_RS24350 () | 91817..92971 | - | 1155 | WP_001139958.1 | integrase | - |
| QE11421_RS24355 () | 93099..93254 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| QE11421_RS24360 () | 94163..94411 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QE11421_RS24365 () | 94408..95700 | - | 1293 | WP_024198499.1 | hypothetical protein | VF |
| QE11421_RS24370 () | 95700..96356 | - | 657 | WP_001389386.1 | hypothetical protein | VF |
| QE11421_RS24375 () | 96341..96901 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QE11421_RS24380 () | 96911..97525 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| QE11421_RS24385 () | 97543..98640 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QE11421_RS24390 () | 98653..100206 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QE11421_RS24395 () | 100217..100669 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| QE11421_RS24400 () | 100656..101951 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QE11421_RS24405 () | 101944..103626 | - | 1683 | WP_199266160.1 | Outer membrane lipoprotein BfpB | VF |
| QE11421_RS24410 () | 103640..104077 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QE11421_RS24415 () | 104077..105144 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| QE11421_RS24420 () | 105768..106064 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| QE11421_RS24425 () | 106240..106494 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QE11421_RS24430 () | 106656..107207 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QE11421_RS24435 () | 107380..108063 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QE11421_RS24440 () | 108317..108850 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| QE11421_RS24445 () | 109292..109579 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QE11421_RS24450 () | 109497..109760 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|