MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 115329 bp
Accession: NZ_CP048823 Location: 1..115329 Organism: Escherichia coli strain QEC11-421 Replicon: plasmid pEcQE11-421-2
Accession: NZ_CP048823 Location: 1..115329 Organism: Escherichia coli strain QEC11-421 Replicon: plasmid pEcQE11-421-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QE11421_RS23280 () | 930..1487 | - | 558 | WP_024175649.1 | lysozyme | - |
| QE11421_RS23285 () | 1656..2144 | + | 489 | WP_097466787.1 | single-stranded DNA-binding protein | - |
| QE11421_RS23290 () | 2393..3748 | + | 1356 | WP_033551022.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| QE11421_RS23295 () | 3956..4327 | - | 372 | WP_099368671.1 | hypothetical protein | - |
| QE11421_RS23300 () | 4531..4839 | - | 309 | WP_110101930.1 | hypothetical protein | - |
| QE11421_RS23305 () | 4829..7816 | - | 2988 | WP_199266154.1 | hypothetical protein | - |
| QE11421_RS23310 () | 7829..8194 | - | 366 | WP_110101932.1 | ddrA | - |
| QE11421_RS23315 () | 8191..10110 | - | 1920 | WP_199266155.1 | hypothetical protein | - |
| QE11421_RS23320 () | 10112..10714 | - | 603 | WP_000164724.1 | hypothetical protein | - |
| QE11421_RS23325 () | 10701..11144 | - | 444 | WP_199266156.1 | lysis protein | - |
| QE11421_RS23330 () | 11141..11470 | - | 330 | WP_000887652.1 | holin | - |
| QE11421_RS23335 () | 11538..11819 | - | 282 | WP_000332810.1 | hypothetical protein | - |
| QE11421_RS23340 () | 12036..12740 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QE11421_RS23345 () | 12786..14294 | - | 1509 | Protein_14 | tail fiber protein | - |
| QE11421_RS23350 () | 14306..14740 | - | 435 | WP_001286328.1 | hypothetical protein | - |
| QE11421_RS23355 () | 14819..15655 | - | 837 | WP_001189838.1 | hypothetical protein | - |
| QE11421_RS23360 () | 15655..17088 | - | 1434 | WP_000047923.1 | bleomycin hydrolase | - |
| QE11421_RS23365 () | 17085..17441 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| QE11421_RS23370 () | 17441..19045 | - | 1605 | Protein_19 | lytic transglycosylase domain-containing protein | - |
| QE11421_RS23375 () | 19038..19735 | - | 698 | Protein_20 | IS1 family transposase | - |
| QE11421_RS23380 () | 19790..21640 | - | 1851 | Protein_21 | lytic transglycosylase domain-containing protein | - |
| QE11421_RS23385 () | 21722..22603 | - | 882 | WP_001702265.1 | hypothetical protein | - |
| QE11421_RS23390 () | 22618..23229 | - | 612 | WP_000523978.1 | hypothetical protein | - |
| QE11421_RS23395 () | 23240..23806 | - | 567 | WP_029401369.1 | hypothetical protein | - |
| QE11421_RS23400 () | 23887..24426 | - | 540 | WP_001033469.1 | DUF5384 family protein | - |
| QE11421_RS23405 () | 24430..24942 | - | 513 | WP_000039791.1 | hypothetical protein | - |
| QE11421_RS23410 () | 25562..25783 | + | 222 | WP_071588786.1 | host cell division inhibitor Icd-like protein | - |
| QE11421_RS23415 () | 25780..26814 | + | 1035 | WP_114190538.1 | phage antirepressor KilAC domain-containing protein | - |
| QE11421_RS23420 () | 26978..27778 | + | 801 | WP_001187876.1 | phage antirepressor KilAC domain-containing protein | - |
| QE11421_RS23425 () | 27808..28653 | + | 846 | WP_001379176.1 | hypothetical protein | - |
| QE11421_RS23430 () | 28822..29526 | + | 705 | WP_000934731.1 | DUF3800 domain-containing protein | - |
| QE11421_RS23435 () | 29526..29990 | + | 465 | WP_000939948.1 | hypothetical protein | - |
| QE11421_RS23440 () | 30537..31046 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| QE11421_RS23445 () | 31058..31639 | - | 582 | WP_000035301.1 | hypothetical protein | - |
| QE11421_RS23450 () | 31675..32490 | - | 816 | WP_069723236.1 | hypothetical protein | - |
| QE11421_RS23455 () | 32500..34089 | - | 1590 | WP_069723237.1 | hypothetical protein | - |
| QE11421_RS23460 () | 34149..35855 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| QE11421_RS23465 () | 36081..37082 | - | 1002 | WP_114190539.1 | ParB/RepB/Spo0J family partition protein | - |
| QE11421_RS23470 () | 37099..38295 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| QE11421_RS23475 () | 38464..39273 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| QE11421_RS23480 () | 39566..40450 | - | 885 | WP_001113737.1 | RepB family plasmid replication initiator protein | - |
| QE11421_RS23485 () | 40786..41178 | - | 393 | WP_029401364.1 | hypothetical protein | - |
| QE11421_RS23490 () | 41356..41778 | - | 423 | WP_000007765.1 | hypothetical protein | - |
| QE11421_RS23495 () | 41818..42606 | - | 789 | WP_044864340.1 | hypothetical protein | - |
| QE11421_RS23500 () | 43069..43353 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| QE11421_RS23505 () | 43346..44251 | + | 906 | WP_063112849.1 | recombination-associated protein RdgC | - |
| QE11421_RS23510 () | 44248..46266 | + | 2019 | WP_114190540.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| QE11421_RS23525 () | 47825..48250 | + | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| QE11421_RS23530 () | 48250..48414 | + | 165 | WP_000234829.1 | DUF3927 family protein | - |
| QE11421_RS23540 () | 48882..50246 | + | 1365 | WP_029365170.1 | replicative DNA helicase | - |
| QE11421_RS23545 () | 50246..51244 | + | 999 | WP_063112851.1 | hypothetical protein | - |
| QE11421_RS23550 () | 51291..51923 | - | 633 | WP_000535203.1 | hypothetical protein | - |
| QE11421_RS23555 () | 51916..52932 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| QE11421_RS23560 () | 52934..53719 | - | 786 | WP_029401429.1 | hypothetical protein | - |
| QE11421_RS23565 () | 53706..54434 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| QE11421_RS23570 () | 54438..55655 | - | 1218 | WP_001141901.1 | hypothetical protein | - |
| QE11421_RS23575 () | 55665..56042 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| QE11421_RS23580 () | 56189..56434 | + | 246 | WP_000840930.1 | hypothetical protein | - |
| QE11421_RS23585 () | 56437..57015 | + | 579 | WP_029401427.1 | VRR-NUC domain-containing protein | - |
| QE11421_RS23590 () | 57082..57237 | + | 156 | WP_000095380.1 | hypothetical protein | - |
| QE11421_RS23595 () | 57179..57841 | + | 663 | WP_032288828.1 | hypothetical protein | - |
| QE11421_RS23600 () | 57739..58365 | + | 627 | WP_000484111.1 | norphogenetic protein | - |
| QE11421_RS23605 () | 58362..59039 | + | 678 | WP_024262884.1 | metallophosphoesterase | - |
| QE11421_RS23610 () | 59036..59737 | + | 702 | WP_000684869.1 | hypothetical protein | - |
| QE11421_RS23615 () | 60039..61301 | + | 1263 | WP_029401421.1 | hypothetical protein | - |
| QE11421_RS23620 () | 61374..61880 | + | 507 | WP_029401419.1 | hypothetical protein | - |
| QE11421_RS23625 () | 62145..65261 | - | 3117 | WP_029401417.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QE11421_RS23630 () | 65383..66651 | - | 1269 | WP_029401415.1 | restriction endonuclease subunit S | - |
| QE11421_RS23635 () | 66648..68204 | - | 1557 | WP_029401414.1 | type I restriction-modification system subunit M | - |
| QE11421_RS23640 () | 68387..68608 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QE11421_RS23645 () | 68608..68988 | + | 381 | WP_001216030.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QE11421_RS23650 () | 68993..69172 | + | 180 | WP_039022005.1 | hypothetical protein | - |
| QE11421_RS23655 () | 69200..70069 | + | 870 | Protein_73 | DUF968 domain-containing protein | - |
| QE11421_RS23660 () | 70244..71095 | - | 852 | WP_000611653.1 | hypothetical protein | - |
| QE11421_RS23665 () | 71206..71415 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| QE11421_RS23670 () | 71606..72303 | + | 698 | Protein_76 | IS1 family transposase IS1R | Transposase |
| QE11421_RS23675 () | 72422..74173 | - | 1752 | Protein_77 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QE11421_RS23680 () | 74162..74569 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| QE11421_RS23685 () | 74707..75591 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| QE11421_RS23690 () | 75623..76822 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QE11421_RS23695 () | 76928..77578 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QE11421_RS23700 () | 77610..77840 | - | 231 | WP_159126541.1 | relaxase | - |
| QE11421_RS23705 () | 77898..78614 | - | 717 | Protein_83 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QE11421_RS23710 () | 78648..79946 | - | 1299 | Protein_84 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QE11421_RS23715 () | 80014..80718 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QE11421_RS23720 () | 80912..81298 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| QE11421_RS23725 () | 81618..82010 | - | 393 | WP_063501574.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| QE11421_RS23730 () | 82345..83049 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QE11421_RS23735 () | 83369..84544 | + | 1176 | WP_072646080.1 | Efflux pump periplasmic linker BepF | VF |
| QE11421_RS23740 () | 84568..87720 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| QE11421_RS23745 () | 87790..88269 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| QE11421_RS23750 () | 88371..89075 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QE11421_RS23755 () | 89285..89635 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| QE11421_RS23760 () | 89838..90851 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| QE11421_RS23765 () | 91009..91482 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QE11421_RS23770 () | 91613..92044 | + | 432 | Protein_96 | nucleotidyltransferase domain-containing protein | - |
| QE11421_RS23775 () | 92097..92801 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QE11421_RS23780 () | 92866..93732 | + | 867 | Protein_98 | Methyl-accepting chemotaxis protein McpQ | VF |
| QE11421_RS23785 () | 94327..94479 | + | 153 | Protein_99 | creatininase | - |
| QE11421_RS23790 () | 94804..95501 | - | 698 | Protein_100 | IS1 family transposase | - |
| QE11421_RS23795 () | 95603..95926 | - | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| QE11421_RS23800 () | 96032..97165 | + | 1134 | WP_001089729.1 | permease | - |
| QE11421_RS23805 () | 97293..97697 | - | 405 | Protein_103 | recombinase family protein | - |
| QE11421_RS23810 () | 97865..100852 | + | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| QE11421_RS23815 () | 100955..101986 | + | 1032 | WP_029393497.1 | site-specific integrase | - |
| QE11421_RS23820 () | 102138..102347 | + | 210 | WP_077249223.1 | lysogeny establishment protein | - |
| QE11421_RS23825 () | 102595..103155 | + | 561 | WP_039021622.1 | Ref family protein | - |
| QE11421_RS23830 () | 103345..103986 | + | 642 | WP_024245511.1 | hypothetical protein | - |
| QE11421_RS23835 () | 104077..105117 | + | 1041 | WP_199266152.1 | hypothetical protein | - |
| QE11421_RS23840 () | 105117..105626 | + | 510 | WP_024245513.1 | hypothetical protein | - |
| QE11421_RS23845 () | 105685..105933 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| QE11421_RS23850 () | 105930..106370 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| QE11421_RS23855 () | 106404..110342 | - | 3939 | WP_199266153.1 | helicase | - |
| QE11421_RS23860 () | 112319..113170 | - | 852 | Protein_114 | SAM-dependent DNA methyltransferase | - |
| QE11421_RS23865 () | 113246..114955 | + | 1710 | WP_110101912.1 | phage portal protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|