MGE detailed information
MGE type: Conjugative plasmid MGE length: 151684 bp
Accession: NZ_CP048797 Location: 1..151684 Organism: Providencia vermicola strain P8538 Replicon: plasmid p8538-NDM-1
Accession: NZ_CP048797 Location: 1..151684 Organism: Providencia vermicola strain P8538 Replicon: plasmid p8538-NDM-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3341_RS20565 () | 1..1101 | + | 1101 | WP_001348532.1 | hypothetical protein | - |
| G3341_RS19510 () | 1448..1729 | + | 282 | Protein_2 | hypothetical protein | - |
| G3341_RS19515 () | 1888..2052 | + | 165 | WP_032427622.1 | hypothetical protein | - |
| G3341_RS19520 () | 2138..2572 | - | 435 | WP_004201092.1 | hypothetical protein | - |
| G3341_RS19525 () | 2590..3705 | - | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| G3341_RS19535 () | 3973..4581 | + | 609 | WP_000849069.1 | hypothetical protein | - |
| G3341_RS19540 () | 4586..5107 | + | 522 | WP_000393783.1 | hypothetical protein | - |
| G3341_RS19545 () | 5110..5631 | + | 522 | WP_000648873.1 | hypothetical protein | - |
| G3341_RS19550 () | 5728..6201 | + | 474 | WP_000057876.1 | hypothetical protein | - |
| G3341_RS19555 () | 6212..6505 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| G3341_RS19560 () | 6510..7364 | + | 855 | WP_000539391.1 | hypothetical protein | - |
| G3341_RS19565 () | 7364..8323 | + | 960 | WP_000829617.1 | S49 family peptidase | - |
| G3341_RS19570 () | 8339..9199 | + | 861 | WP_004201087.1 | DsbA family protein | - |
| G3341_RS19575 () | 9233..9661 | + | 429 | WP_000591076.1 | hypothetical protein | - |
| G3341_RS19580 () | 9719..10078 | + | 360 | WP_000422769.1 | hypothetical protein | - |
| G3341_RS19585 () | 10078..10524 | + | 447 | WP_000919343.1 | hypothetical protein | - |
| G3341_RS19590 () | 10521..11039 | + | 519 | WP_000210757.1 | nitrite reductase | - |
| G3341_RS19595 () | 11039..11269 | + | 231 | WP_000972665.1 | hypothetical protein | - |
| G3341_RS19600 () | 11256..12113 | + | 858 | WP_001167036.1 | hypothetical protein | - |
| G3341_RS20570 () | 12025..12330 | + | 306 | WP_171820680.1 | hypothetical protein | - |
| G3341_RS19610 () | 12333..12860 | + | 528 | WP_004201083.1 | thermonuclease family protein | - |
| G3341_RS19615 () | 12918..13190 | + | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| G3341_RS19620 () | 13279..13572 | + | 294 | WP_001239998.1 | hypothetical protein | - |
| G3341_RS19625 () | 13599..13901 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| G3341_RS19630 () | 13906..14256 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G3341_RS19635 () | 14419..14967 | + | 549 | WP_001061573.1 | hypothetical protein | - |
| G3341_RS19645 () | 15308..15502 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| G3341_RS19650 () | 15513..15884 | + | 372 | WP_000516918.1 | hypothetical protein | - |
| G3341_RS19655 () | 15877..16347 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| G3341_RS19660 () | 16362..16697 | - | 336 | WP_000683477.1 | hypothetical protein | - |
| G3341_RS19665 () | 16794..17282 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| G3341_RS19670 () | 17285..17782 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| G3341_RS19680 () | 18344..19276 | + | 933 | WP_000434070.1 | hypothetical protein | - |
| G3341_RS19685 () | 19350..20813 | + | 1464 | WP_004201081.1 | AAA family ATPase | - |
| G3341_RS20575 () | 20875..21267 | + | 393 | WP_000018404.1 | hypothetical protein | - |
| G3341_RS20580 () | 21316..21510 | + | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| G3341_RS20585 () | 21504..22688 | + | 1185 | WP_000245300.1 | hypothetical protein | - |
| G3341_RS19705 () | 22700..23047 | + | 348 | WP_000039129.1 | hypothetical protein | - |
| G3341_RS19710 () | 23044..23472 | + | 429 | WP_000988988.1 | hypothetical protein | - |
| G3341_RS19715 () | 23465..24028 | + | 564 | WP_000004671.1 | hypothetical protein | - |
| G3341_RS19720 () | 24040..24609 | + | 570 | WP_001256126.1 | hypothetical protein | - |
| G3341_RS19725 () | 24612..25157 | + | 546 | WP_000435225.1 | hypothetical protein | - |
| G3341_RS19730 () | 25274..26212 | + | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| G3341_RS19735 () | 26647..26889 | + | 243 | WP_001096360.1 | hypothetical protein | - |
| G3341_RS19740 () | 26892..27254 | + | 363 | WP_001258026.1 | hypothetical protein | - |
| G3341_RS19745 () | 27247..28491 | + | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| G3341_RS19750 () | 28505..28954 | + | 450 | WP_001053910.1 | hypothetical protein | - |
| G3341_RS19755 () | 28936..29247 | + | 312 | WP_000380893.1 | hypothetical protein | - |
| G3341_RS19765 () | 29421..30206 | + | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| G3341_RS19770 () | 30210..31391 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| G3341_RS19775 () | 31440..31712 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| G3341_RS19780 () | 31765..32400 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| G3341_RS19785 () | 32492..32635 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| G3341_RS19790 () | 32962..33339 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| G3341_RS20590 () | 33332..33613 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| G3341_RS19805 () | 33588..34262 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| G3341_RS19810 () | 34330..34761 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| G3341_RS19815 () | 34767..35078 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| G3341_RS19820 () | 35087..35587 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| G3341_RS19825 () | 35591..37018 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| G3341_RS19830 () | 37018..37674 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| G3341_RS19835 () | 37730..38347 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| G3341_RS19840 () | 38348..38554 | + | 207 | WP_000505706.1 | hypothetical protein | - |
| G3341_RS19845 () | 38559..38858 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| G3341_RS19850 () | 38949..39437 | - | 489 | WP_004201072.1 | hypothetical protein | - |
| G3341_RS19855 () | 39452..41644 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| G3341_RS19860 () | 41644..41877 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| G3341_RS19865 () | 41859..42476 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| G3341_RS19870 () | 42644..45616 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| G3341_RS19875 () | 45613..47478 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| G3341_RS19880 () | 47489..48073 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| G3341_RS19885 () | 48030..48659 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| G3341_RS20595 () | 48707..48883 | + | 177 | WP_169342285.1 | hypothetical protein | - |
| G3341_RS19895 () | 49125..49502 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| G3341_RS19900 () | 49502..50164 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| G3341_RS20505 () | 50345..50488 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| G3341_RS19905 () | 50488..50865 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| G3341_RS19910 () | 51010..51291 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| G3341_RS19915 () | 51288..51914 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| G3341_RS19920 () | 51898..52815 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| G3341_RS19925 () | 52815..54128 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| G3341_RS19930 () | 54125..54703 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G3341_RS19935 () | 54707..55099 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| G3341_RS19940 () | 55384..56646 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| G3341_RS19945 () | 56970..58115 | + | 1146 | WP_015058212.1 | Beta-lactamase | ARG |
| G3341_RS19950 () | 58209..58742 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| G3341_RS19955 () | 58739..59056 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| G3341_RS19965 () | 59784..65270 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| G3341_RS19970 () | 65419..66126 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| G3341_RS19975 () | 66123..68570 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| G3341_RS19980 () | 68585..68902 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| G3341_RS19985 () | 68899..69429 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| G3341_RS19990 () | 69392..70657 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| G3341_RS19995 () | 70654..71325 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| G3341_RS20000 () | 71322..72329 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| G3341_RS20005 () | 72433..75240 | + | 2808 | WP_163863685.1 | conjugal transfer mating pair stabilization protein TraN | - |
| G3341_RS20010 () | 75279..76139 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| G3341_RS20015 () | 76262..76903 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| G3341_RS20020 () | 77198..77518 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| G3341_RS20025 () | 77822..78007 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| G3341_RS20030 () | 78227..79195 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| G3341_RS20035 () | 79206..80114 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| G3341_RS20040 () | 80175..80705 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| G3341_RS20045 () | 80800..81789 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| G3341_RS20050 () | 81852..82862 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| G3341_RS20055 () | 83062..84339 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| G3341_RS20060 () | 84424..86220 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| G3341_RS20065 () | 86282..86617 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| G3341_RS20070 () | 86882..87316 | + | 435 | WP_004200877.1 | hypothetical protein | - |
| G3341_RS20075 () | 87371..87574 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| G3341_RS20080 () | 87646..88251 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| G3341_RS20085 () | 88244..88513 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| G3341_RS20090 () | 88527..88745 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| G3341_RS20095 () | 88819..89376 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| G3341_RS20100 () | 89451..90302 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| G3341_RS20105 () | 90508..90654 | + | 147 | WP_001032043.1 | hypothetical protein | - |
| G3341_RS20110 () | 90761..91147 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| G3341_RS20115 () | 91325..93052 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| G3341_RS20120 () | 93039..93317 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| G3341_RS20125 () | 93390..93611 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| G3341_RS20130 () | 93612..93767 | + | 156 | WP_163863686.1 | hypothetical protein | - |
| G3341_RS20135 () | 93794..94798 | - | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| G3341_RS20140 () | 94877..97849 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| G3341_RS20145 () | 97852..98409 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| G3341_RS20150 () | 98715..99728 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| G3341_RS20155 () | 99959..100513 | + | 555 | WP_032488579.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| G3341_RS20160 () | 100682..101029 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| G3341_RS20165 () | 101023..101862 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| G3341_RS20170 () | 101989..102231 | + | 243 | WP_000376617.1 | hypothetical protein | - |
| G3341_RS20175 () | 102315..102614 | - | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| G3341_RS20180 () | 103231..103782 | + | 552 | Protein_131 | DNA cytosine methyltransferase | - |
| G3341_RS20185 () | 104125..104778 | + | 654 | WP_004201046.1 | endonuclease III | - |
| G3341_RS20190 () | 104876..105721 | - | 846 | WP_000855769.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| G3341_RS20195 () | 106031..106728 | + | 698 | Protein_134 | IS1 family transposase ISKpn14 | Transposase |
| G3341_RS20200 () | 106926..107738 | + | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| G3341_RS20205 () | 107742..108107 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| G3341_RS20210 () | 108112..108750 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| G3341_RS20215 () | 108761..109792 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| G3341_RS20220 () | 109797..110126 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| G3341_RS20225 () | 110320..110610 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| G3341_RS20230 () | 110666..112306 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| G3341_RS20235 () | 112495..113097 | + | 603 | Protein_142 | IS91 family transposase ISPps1 | Transposase |
| G3341_RS20240 () | 113069..115567 | + | 2499 | Protein_143 | tRNA(Glu)-specific nuclease WapA | VF |
| G3341_RS20245 () | 115539..115979 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| G3341_RS20250 () | 116150..116602 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| G3341_RS20255 () | 116618..117220 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| G3341_RS20260 () | 117490..117771 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| G3341_RS20265 () | 118070..118606 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| G3341_RS20270 () | 118609..119619 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| G3341_RS20275 () | 119624..120493 | + | 870 | WP_004201184.1 | 3'-5' exonuclease | - |
| G3341_RS20280 () | 120490..120981 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| G3341_RS20285 () | 121040..121324 | - | 285 | Protein_152 | Tn3 family transposase | - |
| G3341_RS20290 () | 121389..122093 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G3341_RS20295 () | 122147..124594 | - | 2448 | Protein_154 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| G3341_RS20300 () | 124885..125907 | - | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| G3341_RS20305 () | 126261..126536 | + | 276 | WP_001141270.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| G3341_RS20310 () | 126567..127676 | + | 1110 | WP_000842086.1 | S-(hydroxymethyl)glutathione dehydrogenase | - |
| G3341_RS20315 () | 127718..128116 | + | 399 | WP_000235177.1 | VOC family protein | - |
| G3341_RS20320 () | 128182..129018 | + | 837 | WP_071686688.1 | S-formylglutathione hydrolase | - |
| G3341_RS20325 () | 129046..129681 | - | 636 | WP_000470623.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| G3341_RS20330 () | 129849..132887 | + | 3039 | WP_163863687.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| G3341_RS20335 () | 132911..133933 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| G3341_RS20340 () | 134034..134399 | - | 366 | WP_163863689.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| G3341_RS20345 () | 134494..135099 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| G3341_RS20355 () | 135429..136304 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| G3341_RS20360 () | 136457..137497 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| G3341_RS20365 () | 137784..139295 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| G3341_RS20370 () | 139406..140446 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| G3341_RS20375 () | 140448..141881 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| G3341_RS20380 () | 141894..145508 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| G3341_RS20385 () | 145546..145908 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| G3341_RS20390 () | 146624..146896 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| G3341_RS20395 () | 146896..147429 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| G3341_RS20400 () | 147440..148048 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| G3341_RS20405 () | 148045..148596 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| G3341_RS20410 () | 148656..149075 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| G3341_RS20415 () | 149077..149370 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| G3341_RS20420 () | 149387..150370 | - | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| G3341_RS20425 () | 150306..150647 | - | 342 | WP_131728116.1 | hypothetical protein | - |
| G3341_RS20430 () | 150869..151408 | + | 540 | WP_001447712.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|