MGE detailed information
MGE type: Genomic_island MGE length: 11562 bp
Accession: NZ_CP048604 Location: 3599311..3610872 Organism: Escherichia coli strain PapRG-06-3 Replicon: chromosome
Accession: NZ_CP048604 Location: 3599311..3610872 Organism: Escherichia coli strain PapRG-06-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3M72_RS17130 () | 3594312..3594746 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| G3M72_RS17135 () | 3594764..3595642 | - | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| G3M72_RS17140 () | 3595632..3596411 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| G3M72_RS17145 () | 3596422..3596895 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| G3M72_RS17150 () | 3596918..3598198 | - | 1281 | WP_032296572.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| G3M72_RS17155 () | 3598447..3599256 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| G3M72_RS17160 () | 3599311..3599775 | - | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| G3M72_RS17165 () | 3599775..3600110 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| G3M72_RS17170 () | 3600259..3601830 | - | 1572 | WP_040091028.1 | galactarate dehydratase | - |
| G3M72_RS17175 () | 3602205..3603539 | + | 1335 | WP_032296573.1 | galactarate/glucarate/glycerate transporter GarP | - |
| G3M72_RS17180 () | 3603555..3604325 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| G3M72_RS17185 () | 3604355..3605245 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| G3M72_RS17190 () | 3605342..3606487 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| G3M72_RS17200 () | 3607397..3608584 | - | 1188 | WP_000484573.1 | YhaC family protein | - |
| G3M72_RS17205 () | 3608606..3609145 | - | 540 | WP_000675752.1 | hypothetical protein | - |
| G3M72_RS17210 () | 3609401..3609745 | - | 345 | WP_000145820.1 | transcriptional activator TdcR | - |
| G3M72_RS17215 () | 3609934..3610872 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| G3M72_RS17220 () | 3610971..3611960 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| G3M72_RS17225 () | 3611982..3613313 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| G3M72_RS17230 () | 3613339..3614547 | + | 1209 | WP_001352528.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|