MGE detailed information
MGE type: Prophage MGE length: 54073 bp
Accession: NZ_CP048439 Location: 3997519..4051591 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Accession: NZ_CP048439 Location: 3997519..4051591 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GXM24_RS19450 () | 3995123..3995848 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| GXM24_RS19455 () | 3995885..3996424 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| GXM24_RS19460 () | 3996489..3997037 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| GXM24_RS19465 () | 3997519..3998115 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| GXM24_RS19470 () | 3998593..3999195 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| GXM24_RS19475 () | 4000651..4001367 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GXM24_RS19480 () | 4001387..4002493 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| GXM24_RS19485 () | 4002558..4003538 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GXM24_RS19490 () | 4004121..4005361 | - | 1241 | Protein_3799 | helicase YjhR | - |
| GXM24_RS19495 () | 4005477..4005722 | + | 246 | Protein_3800 | GNAT family N-acetyltransferase | - |
| GXM24_RS19500 () | 4006099..4006356 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| GXM24_RS19505 () | 4006368..4006913 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| GXM24_RS19510 () | 4006969..4007715 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| GXM24_RS19515 () | 4007884..4008102 | + | 219 | Protein_3804 | hypothetical protein | - |
| GXM24_RS23135 () | 4008140..4008256 | + | 117 | Protein_3805 | VOC family protein | - |
| GXM24_RS19520 () | 4008501..4009622 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| GXM24_RS19525 () | 4009619..4009897 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| GXM24_RS19530 () | 4009909..4011222 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| GXM24_RS19535 () | 4011235..4012041 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| GXM24_RS19540 () | 4012172..4012603 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| GXM24_RS19545 () | 4012615..4013247 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| GXM24_RS19550 () | 4013264..4014046 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GXM24_RS19555 () | 4014349..4015137 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| GXM24_RS19560 () | 4015142..4016047 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| GXM24_RS19565 () | 4016058..4018025 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| GXM24_RS19570 () | 4018132..4019481 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| GXM24_RS19575 () | 4019828..4020814 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| GXM24_RS19580 () | 4020928..4021625 | - | 698 | Protein_3818 | IS1 family transposase | - |
| GXM24_RS19585 () | 4021917..4022438 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| GXM24_RS19590 () | 4022435..4023388 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| GXM24_RS19595 () | 4023475..4025799 | + | 2325 | WP_000188283.1 | Fe(3+) dicitrate transport protein FecA | - |
| GXM24_RS19600 () | 4025844..4026746 | + | 903 | WP_000879155.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| GXM24_RS19605 () | 4026743..4027741 | + | 999 | WP_000125187.1 | hypothetical protein | VF |
| GXM24_RS19610 () | 4027738..4028694 | + | 957 | WP_000684852.1 | hypothetical protein | VF |
| GXM24_RS19615 () | 4028695..4029462 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| GXM24_RS19620 () | 4030019..4030276 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| GXM24_RS19625 () | 4030359..4031143 | - | 785 | Protein_3827 | IS3 family transposase ISEc52 | Transposase |
| GXM24_RS19630 () | 4031210..4031470 | + | 261 | Protein_3828 | IS3 family transposase ISSfl10 | Transposase |
| GXM24_RS19635 () | 4031535..4032686 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| GXM24_RS19640 () | 4032698..4032955 | - | 258 | Protein_3830 | IS3 family transposase IS911 | Transposase |
| GXM24_RS19645 () | 4033043..4033279 | - | 237 | Protein_3831 | MFS transporter | - |
| GXM24_RS19650 () | 4033269..4033526 | + | 258 | WP_000254999.1 | hypothetical protein | - |
| GXM24_RS19655 () | 4033579..4033704 | - | 126 | WP_000594405.1 | hypothetical protein | - |
| GXM24_RS19660 () | 4033747..4034865 | - | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| GXM24_RS19665 () | 4034877..4036094 | - | 1218 | WP_000179691.1 | MFS transporter | - |
| GXM24_RS19670 () | 4036703..4038049 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| GXM24_RS19675 () | 4038563..4038792 | - | 230 | Protein_3837 | transposase domain-containing protein | - |
| GXM24_RS19680 () | 4039379..4040559 | + | 1181 | Protein_3838 | phosphoethanolamine transferase | - |
| GXM24_RS19690 () | 4042212..4043477 | - | 1266 | Protein_3840 | hypothetical protein ; Integrase | Integrase |
| GXM24_RS19700 () | 4043943..4044962 | + | 1020 | WP_001309160.1 | NADPH-dependent aldehyde reductase Ahr | - |
| GXM24_RS19705 () | 4044966..4045529 | - | 564 | WP_000896738.1 | gluconokinase | - |
| GXM24_RS19710 () | 4045746..4046777 | + | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| GXM24_RS19715 () | 4046801..4047565 | + | 765 | WP_000998695.1 | hypothetical protein | VF |
| GXM24_RS19720 () | 4047627..4048946 | + | 1320 | WP_001128335.1 | gnt-II system L-idonate transporter | - |
| GXM24_RS19725 () | 4049013..4050011 | + | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| GXM24_RS19730 () | 4050089..4051591 | + | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| GXM24_RS19735 () | 4051752..4052834 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| GXM24_RS19740 () | 4052834..4053934 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| GXM24_RS19745 () | 4054201..4055712 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| GXM24_RS19750 () | 4055872..4056315 | + | 444 | WP_000786400.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|