MGE detailed information
MGE type: Conjugative plasmid MGE length: 71270 bp
Accession: NZ_CP048373 Location: 1..71270 Organism: Escherichia coli strain 163 Replicon: plasmid pC-F-163_B
Accession: NZ_CP048373 Location: 1..71270 Organism: Escherichia coli strain 163 Replicon: plasmid pC-F-163_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS08_RS23465 () | 46..1077 | + | 1032 | WP_023518831.1 | RepZ | - |
| GZS08_RS23475 () | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| GZS08_RS23480 () | 2711..3313 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| GZS08_RS23485 () | 3667..5013 | + | 1347 | WP_039052405.1 | hypothetical protein | - |
| GZS08_RS23490 () | 5504..5806 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| GZS08_RS23495 () | 5803..6429 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| GZS08_RS23500 () | 6617..7888 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| GZS08_RS23505 () | 7888..8325 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GZS08_RS23510 () | 8322..8570 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| GZS08_RS23515 () | 8988..9890 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| GZS08_RS23520 () | 9985..10320 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| GZS08_RS23525 () | 10658..11638 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| GZS08_RS23530 () | 11641..12063 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| GZS08_RS23535 () | 12067..12377 | + | 311 | Protein_13 | hypothetical protein | - |
| GZS08_RS23540 () | 12453..13136 | + | 684 | WP_000086127.1 | DNA methylase | - |
| GZS08_RS23545 () | 13137..13358 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| GZS08_RS23550 () | 13372..13806 | + | 435 | WP_011264065.1 | DUF1380 family protein | - |
| GZS08_RS23555 () | 13851..14621 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| GZS08_RS23565 () | 15104..15406 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| GZS08_RS23570 () | 15453..15875 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| GZS08_RS23575 () | 15872..16063 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| GZS08_RS23580 () | 16134..16448 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| GZS08_RS23585 () | 16832..16906 | + | 75 | Protein_22 | single-stranded DNA-binding protein | - |
| GZS08_RS23590 () | 16907..18196 | + | 1290 | Protein_23 | hypothetical protein | - |
| GZS08_RS23595 () | 18249..18683 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| GZS08_RS23600 () | 18680..19399 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| GZS08_RS23605 () | 19396..19992 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| GZS08_RS23615 () | 20454..20954 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| GZS08_RS23620 () | 21683..22117 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| GZS08_RS23625 () | 22211..22477 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| GZS08_RS23630 () | 22970..24511 | + | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| GZS08_RS23635 () | 24526..25272 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| GZS08_RS23640 () | 25360..25629 | + | 270 | Protein_32 | cobalamin biosynthesis protein CbiX | - |
| GZS08_RS23645 () | 25626..26528 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| GZS08_RS23650 () | 26590..26796 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| GZS08_RS23655 () | 26827..27078 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| GZS08_RS24120 () | 27112..27309 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| GZS08_RS23660 () | 27658..28506 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| GZS08_RS23665 () | 28593..28928 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| GZS08_RS23670 () | 29162..29494 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| GZS08_RS23675 () | 29505..32204 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| GZS08_RS23680 () | 32242..34533 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| GZS08_RS23685 () | 34526..35596 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| GZS08_RS23690 () | 35615..36823 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 37003..37060 | - | 58 | NuclAT_1 | - | - |
| - () | 37003..37060 | - | 58 | NuclAT_1 | - | - |
| - () | 37003..37060 | - | 58 | NuclAT_1 | - | - |
| - () | 37003..37060 | - | 58 | NuclAT_1 | - | - |
| GZS08_RS23695 () | 37130..37879 | - | 750 | Protein_44 | protein finQ | - |
| GZS08_RS23700 () | 38108..38425 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| GZS08_RS23705 () | 38422..38955 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| GZS08_RS23710 () | 39049..40194 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| GZS08_RS23715 () | 40647..41344 | - | 698 | Protein_48 | IS1 family transposase | - |
| GZS08_RS23720 () | 41892..42575 | + | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| GZS08_RS23725 () | 42747..43001 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| GZS08_RS23730 () | 44048..45115 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| GZS08_RS23735 () | 45115..45552 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| GZS08_RS23740 () | 45566..47248 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| GZS08_RS23745 () | 47241..48536 | + | 1296 | Protein_54 | type 4b pilus protein PilO2 | - |
| GZS08_RS23750 () | 48523..48975 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| GZS08_RS23755 () | 48986..50539 | + | 1554 | WP_023518854.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| GZS08_RS23760 () | 50552..51637 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GZS08_RS23765 () | 51654..52268 | + | 615 | WP_000908227.1 | hypothetical protein | VF |
| GZS08_RS23770 () | 52278..52838 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| GZS08_RS23775 () | 52823..53479 | + | 657 | WP_001401940.1 | hypothetical protein | VF |
| GZS08_RS23780 () | 53467..54903 | + | 1437 | WP_015058206.1 | hypothetical protein | VF |
| GZS08_RS24125 () | 54900..55097 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| GZS08_RS23785 () | 56728..57425 | + | 698 | Protein_63 | IS1 family transposase IS1X2 | Transposase |
| GZS08_RS23790 () | 57458..58468 | + | 1011 | WP_001685186.1 | integrase | - |
| GZS08_RS23795 () | 58619..59443 | + | 825 | WP_023518851.1 | hypothetical protein | - |
| GZS08_RS23800 () | 59529..60731 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| GZS08_RS23805 () | 60791..61375 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| GZS08_RS23810 () | 61770..61886 | + | 117 | Protein_68 | IncI1-type conjugal transfer lipoprotein TraH | - |
| GZS08_RS23815 () | 61885..63639 | + | 1755 | Protein_69 | DotA/TraY family protein | - |
| GZS08_RS23820 () | 63710..64372 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| GZS08_RS23825 () | 64444..64653 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| GZS08_RS23830 () | 65045..65221 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| GZS08_RS23835 () | 65286..65582 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| GZS08_RS23840 () | 65882..66133 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| GZS08_RS23845 () | 66205..66357 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 66409..66469 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66409..66469 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66409..66469 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66409..66469 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| GZS08_RS23850 () | 66672..67019 | + | 348 | Protein_76 | protein finQ | - |
| GZS08_RS23855 () | 67205..68362 | + | 1158 | Protein_77 | IS1380 family transposase ISEcp1 | Transposase |
| GZS08_RS23860 () | 68418..69115 | + | 698 | Protein_78 | IS1 family transposase | - |
| GZS08_RS23865 () | 69129..69434 | - | 306 | Protein_79 | transcription termination factor NusG | - |
| GZS08_RS23870 () | 69876..70163 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| GZS08_RS23875 () | 70081..70344 | - | 264 | WP_032180564.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|