MGE detailed information
MGE type: Conjugative plasmid MGE length: 88513 bp
Accession: NZ_CP048361 Location: 1..88513 Organism: Escherichia coli strain 53 Replicon: plasmid p53_B
Accession: NZ_CP048361 Location: 1..88513 Organism: Escherichia coli strain 53 Replicon: plasmid p53_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS09_RS24305 () | 46..1077 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| GZS09_RS24315 () | 1986..2255 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| GZS09_RS24320 () | 2252..2533 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GZS09_RS24325 () | 2729..3070 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| GZS09_RS24330 () | 3370..3957 | + | 588 | WP_024189984.1 | serine acetyltransferase | - |
| GZS09_RS24335 () | 4239..4832 | - | 594 | WP_162647498.1 | proQ/FINO family protein | - |
| GZS09_RS24340 () | 5186..6532 | + | 1347 | WP_162647499.1 | hypothetical protein | - |
| GZS09_RS24345 () | 6811..8691 | + | 1881 | WP_001283344.1 | colicin 1A | - |
| GZS09_RS24350 () | 8713..9048 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| GZS09_RS24355 () | 9177..9524 | + | 348 | WP_000142451.1 | hypothetical protein | - |
| GZS09_RS24360 () | 9544..10134 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| GZS09_RS24365 () | 10134..10388 | - | 255 | WP_052988091.1 | hypothetical protein | - |
| GZS09_RS24370 () | 10957..11370 | + | 414 | WP_000465044.1 | hypothetical protein | - |
| GZS09_RS24375 () | 11372..12151 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| GZS09_RS24380 () | 12331..12975 | + | 645 | WP_001144036.1 | ParA family protein | - |
| GZS09_RS24385 () | 13062..13370 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| GZS09_RS24390 () | 13784..14764 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| GZS09_RS24395 () | 14757..15173 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| GZS09_RS24400 () | 15175..16449 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| GZS09_RS24405 () | 16449..16886 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GZS09_RS24410 () | 16883..17131 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| GZS09_RS24415 () | 17549..18451 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| GZS09_RS24420 () | 18448..18759 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| GZS09_RS24425 () | 18835..19518 | + | 684 | WP_000086147.1 | DNA methylase | - |
| GZS09_RS24430 () | 19519..19740 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| GZS09_RS24435 () | 19754..20188 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| GZS09_RS25710 () | 20234..21010 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| GZS09_RS24450 () | 21551..21853 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| GZS09_RS24455 () | 21900..22322 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| GZS09_RS24460 () | 22319..22510 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| GZS09_RS24465 () | 22581..22895 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| GZS09_RS24470 () | 23279..23806 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| GZS09_RS24475 () | 23864..24097 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| GZS09_RS24480 () | 24156..26114 | + | 1959 | WP_001145483.1 | ParB/RepB/Spo0J family partition protein | - |
| GZS09_RS24485 () | 26169..26603 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| GZS09_RS24490 () | 26600..27319 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| GZS09_RS24495 () | 27316..27912 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| GZS09_RS24505 () | 28374..28874 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| GZS09_RS24510 () | 29014..29313 | - | 300 | WP_162647500.1 | hypothetical protein | - |
| GZS09_RS24515 () | 29603..30037 | + | 435 | WP_000218864.1 | hypothetical protein | - |
| GZS09_RS24520 () | 30131..30397 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| GZS09_RS24525 () | 30462..31388 | + | 927 | WP_000038402.1 | Recombination-promoting nuclease RpnA | VF |
| GZS09_RS24530 () | 31388..31633 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| GZS09_RS24535 () | 31664..31915 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| GZS09_RS24540 () | 32496..33344 | + | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| GZS09_RS24545 () | 33430..33765 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| GZS09_RS24550 () | 33999..34331 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| GZS09_RS24555 () | 34342..37041 | + | 2700 | WP_006855641.1 | Protein TraI | Relaxase |
| GZS09_RS24560 () | 37078..39369 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| GZS09_RS24565 () | 39362..40432 | - | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| GZS09_RS24570 () | 40451..41659 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 41839..41901 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41839..41901 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41839..41901 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41839..41901 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| GZS09_RS24575 () | 41951..42103 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| GZS09_RS24580 () | 42175..42426 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 42813..42864 | - | 52 | NuclAT_1 | - | - |
| - () | 42813..42864 | - | 52 | NuclAT_1 | - | - |
| - () | 42813..42864 | - | 52 | NuclAT_1 | - | - |
| - () | 42813..42864 | - | 52 | NuclAT_1 | - | - |
| GZS09_RS25715 () | 43350..43526 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| GZS09_RS24585 () | 43735..43944 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| GZS09_RS24590 () | 44042..44656 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| GZS09_RS24595 () | 44732..46900 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| GZS09_RS24600 () | 46997..47581 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| GZS09_RS24605 () | 47610..48812 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| GZS09_RS24610 () | 48779..49393 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| GZS09_RS24615 () | 49393..52437 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| GZS09_RS24620 () | 52527..53327 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| GZS09_RS24625 () | 53311..53499 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| GZS09_RS24630 () | 53563..53967 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| GZS09_RS24635 () | 54018..54545 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| GZS09_RS24640 () | 54545..55249 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| GZS09_RS24645 () | 55249..56538 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| GZS09_RS24650 () | 56541..57524 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| GZS09_RS24655 () | 57535..58227 | - | 693 | WP_052939152.1 | DotI/IcmL family type IV secretion protein | - |
| GZS09_RS24660 () | 58224..58571 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| GZS09_RS24665 () | 58589..62356 | - | 3768 | WP_001141534.1 | DNA primase | - |
| GZS09_RS24670 () | 62446..62997 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| GZS09_RS24675 () | 63012..63302 | - | 291 | WP_001330823.1 | hypothetical protein | - |
| GZS09_RS24680 () | 63299..64447 | - | 1149 | WP_001024975.1 | putative protein YggR | VF |
| GZS09_RS24685 () | 64444..65262 | - | 819 | WP_052939153.1 | hypothetical protein | VF |
| GZS09_RS24690 () | 65259..65717 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| GZS09_RS24695 () | 66112..66696 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| GZS09_RS24700 () | 66756..67958 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| GZS09_RS24705 () | 68044..68868 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| GZS09_RS24710 () | 69019..70173 | - | 1155 | WP_001139958.1 | integrase | - |
| GZS09_RS24715 () | 70301..70456 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| GZS09_RS24720 () | 71939..73231 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| GZS09_RS24725 () | 73231..73887 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| GZS09_RS24730 () | 73872..74432 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| GZS09_RS24735 () | 74442..75056 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| GZS09_RS24740 () | 75074..76171 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GZS09_RS24745 () | 76184..77737 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| GZS09_RS24750 () | 77748..78200 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| GZS09_RS24755 () | 78187..79482 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| GZS09_RS24760 () | 79475..81157 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| GZS09_RS24765 () | 81171..81608 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| GZS09_RS24770 () | 81608..82675 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| GZS09_RS24775 () | 83594..83890 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| GZS09_RS24780 () | 84066..84320 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| GZS09_RS24785 () | 84482..85033 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| GZS09_RS24790 () | 85206..85889 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| GZS09_RS24795 () | 86143..86676 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| GZS09_RS24800 () | 87118..87405 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| GZS09_RS24805 () | 87323..87586 | - | 264 | WP_001387472.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|