MGE detailed information
MGE type: Conjugative plasmid MGE length: 59239 bp
Accession: NZ_CP048339 Location: 1..59239 Organism: Escherichia coli strain 142 Replicon: plasmid p142_B
Accession: NZ_CP048339 Location: 1..59239 Organism: Escherichia coli strain 142 Replicon: plasmid p142_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS12_RS25215 () | 2032..2268 | + | 237 | WP_162646452.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| GZS12_RS25220 () | 2271..2585 | + | 315 | WP_162646453.1 | CcdB family protein | Toxin Detail |
| GZS12_RS25225 () | 2870..3379 | - | 510 | WP_162646454.1 | MucR family transcriptional regulator | - |
| GZS12_RS25230 () | 3427..5514 | - | 2088 | WP_162646455.1 | hypothetical protein | VF |
| GZS12_RS25235 () | 5527..6477 | - | 951 | WP_004206886.1 | DsbC family protein | - |
| GZS12_RS25240 () | 6488..7750 | - | 1263 | WP_032426772.1 | hypothetical protein | - |
| GZS12_RS25245 () | 7795..8190 | - | 396 | WP_004187436.1 | hypothetical protein | VF |
| GZS12_RS25250 () | 8295..8678 | - | 384 | WP_032451295.1 | DUF1496 domain-containing protein | - |
| GZS12_RS25255 () | 8758..9411 | + | 654 | WP_039592068.1 | CPBP family intramembrane metalloprotease | - |
| GZS12_RS25260 () | 9564..9998 | + | 435 | WP_015062799.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GZS12_RS25265 () | 9986..11251 | + | 1266 | WP_040224115.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| GZS12_RS25270 () | 11274..12122 | - | 849 | WP_004187418.1 | 3'-5' exonuclease | - |
| GZS12_RS25275 () | 12125..12445 | - | 321 | WP_004187415.1 | hypothetical protein | - |
| GZS12_RS25280 () | 12590..12829 | - | 240 | WP_050578149.1 | hypothetical protein | - |
| GZS12_RS25285 () | 13296..13505 | - | 210 | WP_162646456.1 | hypothetical protein | - |
| GZS12_RS25290 () | 13508..13726 | - | 219 | WP_011091034.1 | hypothetical protein | - |
| GZS12_RS25295 () | 13771..14457 | - | 687 | WP_162646457.1 | hypothetical protein | - |
| GZS12_RS25300 () | 14484..15089 | - | 606 | Protein_18 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| GZS12_RS25305 () | 15616..15921 | + | 306 | WP_077138909.1 | hypothetical protein | - |
| GZS12_RS25310 () | 15936..16208 | + | 273 | WP_040027886.1 | hypothetical protein | - |
| GZS12_RS25315 () | 16214..16798 | + | 585 | WP_040027884.1 | hypothetical protein | - |
| GZS12_RS25320 () | 16795..17514 | + | 720 | WP_162646458.1 | hypothetical protein | - |
| GZS12_RS25325 () | 17676..18221 | - | 546 | WP_162646459.1 | hypothetical protein | - |
| GZS12_RS25330 () | 18357..18818 | + | 462 | WP_162646467.1 | hypothetical protein | - |
| GZS12_RS25335 () | 18815..19063 | + | 249 | WP_040119734.1 | helix-turn-helix domain-containing protein | - |
| GZS12_RS25340 () | 19056..19643 | + | 588 | WP_162646460.1 | restriction endonuclease | - |
| GZS12_RS25345 () | 19640..20125 | + | 486 | WP_162646461.1 | hypothetical protein | - |
| GZS12_RS25350 () | 20122..20370 | + | 249 | WP_040119731.1 | hypothetical protein | - |
| GZS12_RS25355 () | 20389..21129 | + | 741 | WP_162646462.1 | tyrosine-type recombinase/integrase | - |
| GZS12_RS25360 () | 21370..22344 | + | 975 | WP_077138922.1 | plasmid segregation protein ParM | - |
| GZS12_RS25365 () | 22347..22790 | + | 444 | WP_162646463.1 | plasmid partitioning/stability family protein | - |
| GZS12_RS25370 () | 22800..23363 | + | 564 | WP_004187378.1 | Phospholipase D | VF |
| GZS12_RS25375 () | 23742..23987 | + | 246 | WP_019725064.1 | hypothetical protein | - |
| GZS12_RS25380 () | 23980..24459 | + | 480 | WP_011091051.1 | hypothetical protein | - |
| GZS12_RS25385 () | 24488..24898 | + | 411 | WP_004206907.1 | hypothetical protein | - |
| GZS12_RS25390 () | 25016..25279 | + | 264 | WP_004206908.1 | hypothetical protein | - |
| GZS12_RS25395 () | 25301..25663 | + | 363 | WP_004187371.1 | DUF3085 domain-containing protein | - |
| GZS12_RS25400 () | 25785..26234 | + | 450 | WP_004206910.1 | Mov34/MPN/PAD-1 family protein | - |
| GZS12_RS25405 () | 26279..26545 | + | 267 | WP_004187367.1 | helix-turn-helix domain-containing protein | - |
| GZS12_RS25410 () | 26609..27892 | + | 1284 | WP_039592092.1 | DGQHR domain-containing protein | - |
| GZS12_RS25415 () | 28500..28679 | + | 180 | WP_004187364.1 | hypothetical protein | - |
| GZS12_RS25420 () | 28752..29612 | + | 861 | WP_004206911.1 | DUF4942 domain-containing protein | - |
| GZS12_RS25425 () | 29801..30139 | + | 339 | WP_020805654.1 | hypothetical protein | - |
| GZS12_RS25430 () | 30237..30467 | + | 231 | WP_004187345.1 | hypothetical protein | - |
| GZS12_RS25435 () | 30766..31023 | + | 258 | WP_162646451.1 | hypothetical protein | - |
| GZS12_RS25440 () | 31087..31497 | + | 411 | WP_011154458.1 | DUF1380 family protein | - |
| GZS12_RS25445 () | 31559..31864 | + | 306 | WP_004187339.1 | hypothetical protein | - |
| GZS12_RS25450 () | 32065..32505 | + | 441 | WP_004206916.1 | antirestriction protein | - |
| GZS12_RS25455 () | 32549..32833 | + | 285 | WP_045325057.1 | hypothetical protein | - |
| GZS12_RS25460 () | 32988..33209 | + | 222 | WP_004187336.1 | hypothetical protein | - |
| GZS12_RS25465 () | 33281..33715 | + | 435 | WP_004187334.1 | single-stranded DNA-binding protein | - |
| GZS12_RS25470 () | 33771..34082 | + | 312 | WP_004187333.1 | hypothetical protein | - |
| GZS12_RS25475 () | 34215..34751 | + | 537 | WP_011091066.1 | hypothetical protein | - |
| GZS12_RS25480 () | 35252..35617 | - | 366 | WP_011091067.1 | hypothetical protein | - |
| GZS12_RS25485 () | 35893..36210 | + | 318 | WP_011091068.1 | NikA | - |
| GZS12_RS25490 () | 36197..38176 | + | 1980 | WP_004187323.1 | Protein TraI | Relaxase |
| GZS12_RS25495 () | 38190..38690 | + | 501 | WP_004187320.1 | DotD/TraH family lipoprotein | - |
| GZS12_RS25500 () | 38687..39466 | + | 780 | WP_004187315.1 | hypothetical protein | VF |
| GZS12_RS25505 () | 39477..40640 | + | 1164 | WP_004187313.1 | putative protein YggR | VF |
| GZS12_RS25510 () | 40630..40890 | + | 261 | WP_004187310.1 | IcmT/TraK family protein | - |
| GZS12_RS25515 () | 42676..44352 | + | 1677 | WP_162646468.1 | DNA primase TraC | VF |
| GZS12_RS25520 () | 44294..44830 | + | 537 | WP_162646464.1 | hypothetical protein | - |
| GZS12_RS25525 () | 44831..45028 | - | 198 | WP_004187464.1 | hypothetical protein | - |
| GZS12_RS25530 () | 45015..45425 | - | 411 | WP_004187465.1 | H-NS histone family protein | - |
| GZS12_RS25535 () | 45424..46206 | + | 783 | WP_015058941.1 | hypothetical protein | VF |
| GZS12_RS25540 () | 46215..47366 | + | 1152 | WP_162646465.1 | hypothetical protein | VF |
| GZS12_RS25545 () | 47378..48727 | + | 1350 | WP_015062830.1 | conjugal transfer protein TraO | - |
| GZS12_RS25550 () | 48739..49443 | + | 705 | WP_132240974.1 | conjugal transfer protein TraP | - |
| GZS12_RS25555 () | 49467..49997 | + | 531 | WP_011091077.1 | conjugal transfer protein TraQ | - |
| GZS12_RS25560 () | 50014..50403 | + | 390 | WP_011091078.1 | hypothetical protein | - |
| GZS12_RS25565 () | 50449..50943 | + | 495 | WP_015243645.1 | hypothetical protein | - |
| GZS12_RS25570 () | 50940..53990 | + | 3051 | WP_031942490.1 | plasmid transfer protein | - |
| GZS12_RS25575 () | 53987..55195 | + | 1209 | WP_004187486.1 | conjugal transfer protein TraW | - |
| GZS12_RS25580 () | 55192..55788 | + | 597 | WP_015060003.1 | hypothetical protein | - |
| GZS12_RS25585 () | 55781..57976 | + | 2196 | WP_015062834.1 | DotA/TraY family protein | - |
| GZS12_RS25590 () | 57978..58631 | + | 654 | WP_162646466.1 | hypothetical protein | - |
| GZS12_RS25595 () | 58712..58942 | + | 231 | WP_011091085.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|