MGE detailed information
MGE type: Prophage MGE length: 39786 bp
Accession: NZ_CP048330 Location: 1971697..2011482 Organism: Escherichia coli strain 10 Replicon: chromosome
Accession: NZ_CP048330 Location: 1971697..2011482 Organism: Escherichia coli strain 10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS13_RS09425 () | 1967411..1969183 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| GZS13_RS09430 () | 1969301..1969753 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| GZS13_RS09435 () | 1969782..1970522 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GZS13_RS09440 () | 1970557..1971078 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| GZS13_RS09445 () | 1971080..1971664 | - | 585 | WP_162656950.1 | YebB family permuted papain-like enzyme | - |
| GZS13_RS09450 () | 1971697..1972394 | + | 698 | Protein_1837 | IS1 family transposase IS1A | Transposase |
| GZS13_RS09455 () | 1972530..1972595 | + | 66 | WP_077766330.1 | stress response small protein YobI | - |
| GZS13_RS09460 () | 1972734..1973345 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| GZS13_RS09465 () | 1973354..1974364 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| GZS13_RS09470 () | 1974511..1975296 | - | 786 | WP_000571480.1 | Putative metal chaperone YciC | VF |
| GZS13_RS09475 () | 1975293..1976048 | - | 756 | WP_032297909.1 | HTH-type transcriptional regulator MgrA | VF |
| GZS13_RS09480 () | 1976127..1977059 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| GZS13_RS09485 () | 1977075..1978397 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| GZS13_RS09490 () | 1978517..1979488 | + | 972 | WP_000448381.1 | Undecaprenyl-diphosphatase | VF |
| GZS13_RS09495 () | 1979619..1981061 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| GZS13_RS09500 () | 1981189..1982058 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| GZS13_RS09505 () | 1982396..1983871 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| GZS13_RS09510 () | 1984106..1985917 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| GZS13_RS09515 () | 1985954..1986595 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GZS13_RS09520 () | 1986651..1987829 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GZS13_RS09525 () | 1987963..1988253 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| GZS13_RS09530 () | 1988320..1988676 | + | 357 | WP_001295500.1 | protein YebF | - |
| GZS13_RS09535 () | 1989003..1989662 | + | 660 | WP_032297905.1 | tellurite resistance TerB family protein | - |
| GZS13_RS09540 () | 1989871..1991931 | + | 2061 | WP_024250394.1 | oligopeptidase B | - |
| GZS13_RS09545 () | 1991928..1992590 | - | 663 | WP_032297904.1 | exodeoxyribonuclease X | - |
| GZS13_RS09550 () | 1992614..1993270 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| GZS13_RS09555 () | 1993372..1993602 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GZS13_RS09560 () | 1993741..1994115 | + | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| GZS13_RS09565 () | 1994119..1994991 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| GZS13_RS09570 () | 1995004..1995345 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 1995373..1995644 | - | 272 | - | - | Antitoxin Detail |
| - () | 1995503..1995606 | + | 104 | - | - | Toxin Detail |
| GZS13_RS09575 () | 1995741..1996397 | + | 657 | WP_000812733.1 | protein-serine/threonine phosphatase | - |
| GZS13_RS09580 () | 1996398..1996589 | - | 192 | WP_001338167.1 | YebW family protein | - |
| GZS13_RS09585 () | 1996694..1996930 | - | 237 | WP_001338166.1 | DUF1480 family protein | - |
| GZS13_RS09590 () | 1997048..1998487 | - | 1440 | WP_001338165.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GZS13_RS09595 () | 1998567..2001200 | - | 2634 | WP_032297899.1 | hypothetical protein | VF |
| GZS13_RS09600 () | 2001169..2002452 | - | 1284 | WP_001741872.1 | membrane integrity lipid transport subunit YebS | - |
| GZS13_RS09605 () | 2002582..2003079 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| GZS13_RS09610 () | 2003176..2003874 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| GZS13_RS09615 () | 2003894..2005942 | + | 2049 | WP_032297897.1 | carboxy terminal-processing peptidase | - |
| GZS13_RS09620 () | 2006134..2007015 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GZS13_RS09625 () | 2007061..2008434 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| GZS13_RS09630 () | 2008611..2009402 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| GZS13_RS09635 () | 2009545..2009784 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| GZS13_RS09640 () | 2009943..2010086 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GZS13_RS09645 () | 2010161..2010448 | + | 288 | WP_001006866.1 | YebO family protein | - |
| GZS13_RS09650 () | 2011117..2011260 | + | 144 | WP_001295496.1 | YobF family protein | - |
| GZS13_RS09655 () | 2011273..2011482 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GZS13_RS09660 () | 2011648..2012457 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GZS13_RS09665 () | 2012454..2013020 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| GZS13_RS09670 () | 2013449..2013907 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| GZS13_RS09675 () | 2013962..2014813 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GZS13_RS09680 () | 2014826..2015626 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|