MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94239 bp
Accession: NZ_CP048307 Location: 1..94239 Organism: Escherichia coli strain 9 Replicon: plasmid p009_C
Accession: NZ_CP048307 Location: 1..94239 Organism: Escherichia coli strain 9 Replicon: plasmid p009_C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS17_RS25225 () | 2405..2941 | + | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| GZS17_RS25230 () | 3040..3321 | - | 282 | WP_001304710.1 | YjcB family protein | - |
| GZS17_RS25235 () | 3750..5303 | + | 1554 | WP_001327775.1 | putative cyclic di-GMP phosphodiesterase PdeC | VF |
| GZS17_RS25240 () | 5339..5662 | - | 324 | WP_000019358.1 | Regulatory protein SoxS | VF |
| GZS17_RS25245 () | 5748..6212 | + | 465 | WP_000412431.1 | IS607 family transposase ISLhe9 | Transposase |
| GZS17_RS25250 () | 6760..8109 | + | 1350 | WP_000106892.1 | guanine/hypoxanthine transporter GhxP | - |
| GZS17_RS25255 () | 8260..9909 | + | 1650 | WP_000402206.1 | Na+/H+ antiporter | - |
| GZS17_RS25260 () | 9945..10829 | - | 885 | WP_000354954.1 | Hydrogen peroxide-inducible genes activator | VF |
| GZS17_RS25265 () | 10933..11343 | + | 411 | WP_001143718.1 | CidA/LrgA family protein | - |
| GZS17_RS25270 () | 11336..12025 | + | 690 | WP_001273403.1 | LrgB family protein | - |
| GZS17_RS25275 () | 12064..13713 | - | 1650 | WP_000832549.1 | cation/acetate symporter ActP | - |
| GZS17_RS25280 () | 13710..14024 | - | 315 | WP_001296646.1 | DUF485 domain-containing protein | - |
| GZS17_RS25285 () | 14327..16285 | - | 1959 | WP_000078223.1 | acetate--CoA ligase | - |
| GZS17_RS25290 () | 16677..18113 | + | 1437 | WP_000196879.1 | ammonia-forming nitrite reductase cytochrome c552 subunit | - |
| GZS17_RS25295 () | 18158..18724 | + | 567 | WP_001295391.1 | cytochrome c nitrite reductase pentaheme subunit | - |
| GZS17_RS25300 () | 18721..19392 | + | 672 | WP_000220273.1 | cytochrome c nitrite reductase Fe-S protein | - |
| GZS17_RS25305 () | 19389..20345 | + | 957 | WP_000195192.1 | cytochrome c nitrite reductase subunit NrfD | - |
| GZS17_RS25310 () | 20365..22083 | + | 1719 | WP_071526285.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| GZS17_RS25315 () | 22076..22459 | + | 384 | WP_001032550.1 | heme lyase NrfEFG subunit NrfF | - |
| GZS17_RS25320 () | 22456..23052 | + | 597 | WP_000812989.1 | heme lyase NrfEFG subunit NrfG | - |
| GZS17_RS25325 () | 23395..24708 | + | 1314 | WP_000789589.1 | glutamate/aspartate:proton symporter GltP | - |
| GZS17_RS25330 () | 24969..25658 | - | 690 | WP_001296650.1 | sel1 repeat family protein | - |
| GZS17_RS25335 () | 25769..26473 | - | 705 | WP_000156927.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| GZS17_RS25340 () | 26460..27296 | - | 837 | WP_000132446.1 | Dipeptide transport ATP-binding protein DppD | VF |
| GZS17_RS25345 () | 27289..28122 | - | 834 | WP_001131977.1 | ABC transporter permease | - |
| GZS17_RS25350 () | 28122..29171 | - | 1050 | WP_001296651.1 | ABC transporter permease | - |
| GZS17_RS25355 () | 29271..30839 | - | 1569 | WP_000592281.1 | ABC transporter substrate-binding protein | - |
| GZS17_RS25360 () | 31214..33361 | - | 2148 | WP_011076734.1 | formate dehydrogenase H subunit alpha, selenocysteine-containing | - |
| GZS17_RS25365 () | 33559..35025 | - | 1467 | WP_000610612.1 | multidrug efflux transporter outer membrane subunit MdtP | - |
| GZS17_RS25370 () | 35022..37073 | - | 2052 | WP_001275175.1 | multidrug efflux transporter permease subunit MdtO | - |
| GZS17_RS25375 () | 37073..38104 | - | 1032 | WP_000446365.1 | Multidrug resistance protein MdtN | VF |
| GZS17_RS25380 () | 38123..38398 | - | 276 | WP_001317551.1 | hypothetical protein | - |
| GZS17_RS25385 () | 38607..40592 | - | 1986 | WP_001443151.1 | alkyl sulfatase YjcS | - |
| GZS17_RS25390 () | 40865..41794 | - | 930 | WP_001171670.1 | allose kinase | - |
| GZS17_RS25395 () | 41778..42473 | - | 696 | WP_162655277.1 | D-allulose-6-phosphate 3-epimerase | VF |
| GZS17_RS25400 () | 42484..43464 | - | 981 | WP_000507101.1 | D-allose ABC transporter permease | - |
| GZS17_RS25405 () | 43443..44975 | - | 1533 | WP_000235240.1 | Ribose import ATP-binding protein RbsA | VF |
| GZS17_RS25410 () | 45102..46037 | - | 936 | WP_001361478.1 | D-allose transporter substrate-binding protein | - |
| GZS17_RS25415 () | 46096..46986 | - | 891 | WP_000083216.1 | als operon DNA-binding transcriptional repressor AlsR | - |
| GZS17_RS25420 () | 47345..47794 | + | 450 | WP_000716791.1 | bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB | - |
| GZS17_RS25425 () | 47863..48192 | + | 330 | WP_000819746.1 | protein YjdP | - |
| GZS17_RS25430 () | 48220..48978 | - | 759 | WP_000059916.1 | phosphonate metabolism protein PhnP | - |
| GZS17_RS25435 () | 48980..49414 | - | 435 | WP_001110514.1 | aminoalkylphosphonate N-acetyltransferase | - |
| GZS17_RS25440 () | 49401..49958 | - | 558 | WP_000145993.1 | ribose 1,5-bisphosphokinase | - |
| GZS17_RS25445 () | 49958..51094 | - | 1137 | WP_021566750.1 | alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase | - |
| GZS17_RS25450 () | 51091..51771 | - | 681 | WP_000611411.1 | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL | VF |
| GZS17_RS25455 () | 51882..52640 | - | 759 | WP_001075531.1 | Putative phosphonates utilization ATP-binding protein PhnK | VF |
| GZS17_RS25460 () | 52637..53482 | - | 846 | WP_000002278.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| GZS17_RS25465 () | 53475..54539 | - | 1065 | WP_001304700.1 | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI | - |
| GZS17_RS25470 () | 54539..55123 | - | 585 | WP_000171593.1 | phosphonate C-P lyase system protein PhnH | - |
| GZS17_RS25475 () | 55120..55572 | - | 453 | WP_000542780.1 | phosphonate C-P lyase system protein PhnG | - |
| GZS17_RS25480 () | 55573..56298 | - | 726 | WP_001296657.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| GZS17_RS25485 () | 56319..57098 | - | 780 | WP_001296658.1 | phosphonate ABC transporter, permease protein PhnE | - |
| GZS17_RS25490 () | 57204..58220 | - | 1017 | WP_000991977.1 | phosphonate ABC transporter substrate-binding protein | - |
| GZS17_RS25495 () | 58245..59033 | - | 789 | WP_001193412.1 | Phosphate-import ATP-binding protein PhnC | VF |
| GZS17_RS25500 () | 59166..59609 | - | 444 | WP_001131332.1 | VOC family metalloprotein YjdN | - |
| GZS17_RS25505 () | 59769..60104 | - | 336 | WP_001300891.1 | phnA family protein | - |
| GZS17_RS25510 () | 60507..62735 | + | 2229 | WP_000288549.1 | clamp-binding protein CrfC | - |
| GZS17_RS25515 () | 62732..63610 | + | 879 | WP_000169154.1 | YjcZ-like family protein | - |
| GZS17_RS25520 () | 63874..65376 | + | 1503 | WP_001296659.1 | glycine betaine/L-proline transporter ProP | - |
| GZS17_RS25525 () | 65488..65577 | + | 90 | WP_000797657.1 | LpxT activity modulator PmrR | - |
| GZS17_RS25530 () | 65553..66653 | - | 1101 | WP_001052123.1 | two-component system sensor histidine kinase PmrB | - |
| GZS17_RS25535 () | 66654..67322 | - | 669 | WP_000697907.1 | Transcriptional regulatory protein BasR | VF |
| GZS17_RS25540 () | 67319..68962 | - | 1644 | WP_001443152.1 | Phosphoethanolamine transferase EptA | VF |
| GZS17_RS25545 () | 69066..70403 | - | 1338 | WP_000093154.1 | arginine/agmatine antiporter | - |
| GZS17_RS25550 () | 70540..71301 | - | 762 | WP_001217059.1 | HTH-type transcriptional regulator GadX | VF |
| GZS17_RS25555 () | 71637..73904 | - | 2268 | WP_001528351.1 | arginine decarboxylase | - |
| GZS17_RS25560 () | 74103..75011 | - | 909 | WP_021566751.1 | transcriptional regulator MelR | - |
| GZS17_RS25565 () | 75294..76649 | + | 1356 | WP_000986622.1 | alpha-galactosidase | - |
| GZS17_RS25570 () | 76646..77288 | - | 643 | Protein_70 | DUF2238 domain-containing protein | - |
| GZS17_RS25575 () | 77411..79057 | - | 1647 | WP_000066699.1 | class I fumarate hydratase | - |
| GZS17_RS25580 () | 79135..80475 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| GZS17_RS25585 () | 81046..81765 | - | 720 | WP_000611291.1 | Transcriptional regulatory protein DcuR | VF |
| GZS17_RS25590 () | 81762..83393 | - | 1632 | WP_021566752.1 | sensor histidine kinase | - |
| GZS17_RS25595 () | 83574..83804 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| GZS17_RS25600 () | 83816..84088 | + | 273 | WP_021566753.1 | N-acetyltransferase | - |
| GZS17_RS25605 () | 84317..84613 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GZS17_RS25610 () | 84641..84814 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GZS17_RS25615 () | 84933..86450 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| GZS17_RS25620 () | 86687..88144 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| GZS17_RS25625 () | 88203..90350 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| GZS17_RS25630 () | 90430..91764 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GZS17_RS25635 () | 92130..93668 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|