MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33507 bp
Accession: NZ_CP048254 Location: 1567324..1600830 Organism: Neisseria gonorrhoeae strain CT530 Replicon: chromosome
Accession: NZ_CP048254 Location: 1567324..1600830 Organism: Neisseria gonorrhoeae strain CT530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYN04_RS08050 (GYN04_07830) | 1562780..1564198 | - | 1419 | WP_047924463.1 | type I glutamate--ammonia ligase | - |
| GYN04_RS08055 (GYN04_07840) | 1564509..1565318 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| GYN04_RS08060 (GYN04_07845) | 1565321..1566022 | + | 702 | WP_003689538.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| GYN04_RS08070 (GYN04_07855) | 1566562..1567296 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| GYN04_RS08075 (GYN04_07860) | 1567367..1567897 | - | 531 | WP_003689542.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| GYN04_RS08080 (GYN04_07865) | 1567878..1568459 | - | 582 | WP_003689544.1 | LPS export ABC transporter periplasmic protein LptC | - |
| GYN04_RS08085 (GYN04_07870) | 1568456..1568992 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| GYN04_RS08090 (GYN04_07875) | 1569058..1570032 | - | 975 | WP_003689550.1 | hypothetical protein | VF |
| GYN04_RS08095 (GYN04_07880) | 1570129..1571184 | + | 1056 | WP_003689551.1 | transaldolase | - |
| GYN04_RS11805 | 1571196..1571330 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| GYN04_RS08100 (GYN04_07885) | 1571335..1571625 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| GYN04_RS08105 (GYN04_07890) | 1571642..1572529 | + | 888 | WP_003689554.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| GYN04_RS08110 (GYN04_07895) | 1572599..1573615 | - | 1017 | WP_003689555.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| GYN04_RS08115 (GYN04_07900) | 1573735..1574889 | + | 1155 | WP_050159317.1 | hypothetical protein ; Integrase | Integrase |
| GYN04_RS08120 (GYN04_07905) | 1574939..1575205 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| GYN04_RS08125 (GYN04_07910) | 1575313..1576260 | - | 948 | WP_050303819.1 | hypothetical protein | - |
| GYN04_RS08130 (GYN04_07915) | 1576232..1576462 | - | 231 | WP_003695893.1 | hypothetical protein | - |
| GYN04_RS08135 (GYN04_07920) | 1576459..1577442 | - | 984 | WP_082298685.1 | hypothetical protein | - |
| GYN04_RS08140 (GYN04_07925) | 1577553..1577768 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| GYN04_RS08145 (GYN04_07930) | 1577820..1578311 | - | 492 | WP_003691537.1 | siphovirus Gp157 family protein | - |
| GYN04_RS08150 (GYN04_07935) | 1578308..1578466 | - | 159 | WP_250328365.1 | hypothetical protein | - |
| GYN04_RS08155 | 1578625..1578849 | - | 225 | WP_250328366.1 | hypothetical protein | - |
| GYN04_RS08160 | 1578958..1579311 | - | 354 | WP_250328367.1 | hypothetical protein | - |
| GYN04_RS08165 | 1579325..1579540 | - | 216 | WP_250328368.1 | hypothetical protein | - |
| GYN04_RS08170 (GYN04_07945) | 1579581..1579814 | - | 234 | WP_250328369.1 | hypothetical protein | - |
| GYN04_RS08175 (GYN04_07950) | 1579967..1580299 | - | 333 | WP_003696914.1 | hypothetical protein | - |
| GYN04_RS08180 (GYN04_07955) | 1580440..1580727 | - | 288 | WP_196374913.1 | hypothetical protein | - |
| GYN04_RS08185 (GYN04_07960) | 1580724..1581200 | - | 477 | WP_002255718.1 | hypothetical protein | - |
| GYN04_RS08190 (GYN04_07965) | 1581233..1581433 | - | 201 | WP_047954343.1 | hypothetical protein | - |
| GYN04_RS08195 (GYN04_07970) | 1581644..1582405 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| GYN04_RS08200 (GYN04_07975) | 1582504..1582905 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GYN04_RS08205 (GYN04_07980) | 1583007..1583189 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GYN04_RS08210 (GYN04_07985) | 1583359..1584177 | - | 819 | WP_012503752.1 | DUF3037 domain-containing protein | - |
| GYN04_RS08215 (GYN04_07990) | 1584174..1584872 | - | 699 | WP_003689139.1 | hypothetical protein | - |
| GYN04_RS08220 (GYN04_07995) | 1585111..1585821 | - | 711 | WP_050161643.1 | helix-turn-helix transcriptional regulator | - |
| GYN04_RS08225 (GYN04_08000) | 1585937..1586125 | + | 189 | WP_003689136.1 | helix-turn-helix domain-containing protein | - |
| GYN04_RS08230 | 1586205..1586360 | + | 156 | WP_003691446.1 | hypothetical protein | - |
| GYN04_RS08235 (GYN04_08005) | 1586337..1586522 | - | 186 | WP_250328370.1 | hypothetical protein | - |
| GYN04_RS08240 (GYN04_08010) | 1586694..1586921 | + | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| GYN04_RS08245 (GYN04_08015) | 1586918..1587943 | + | 1026 | WP_250328371.1 | helix-turn-helix domain-containing protein | - |
| GYN04_RS08250 (GYN04_08020) | 1587958..1588740 | + | 783 | WP_025456432.1 | IS21 family transposase ISGur15 | Transposase |
| GYN04_RS08255 (GYN04_08025) | 1588810..1589040 | + | 231 | WP_250328372.1 | hypothetical protein | - |
| GYN04_RS08260 (GYN04_08030) | 1589054..1589548 | + | 495 | WP_047923242.1 | DUF3310 domain-containing protein | - |
| GYN04_RS08265 | 1589725..1589874 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| GYN04_RS08270 | 1589967..1590182 | + | 216 | WP_250328373.1 | hypothetical protein | - |
| GYN04_RS08275 (GYN04_08035) | 1590173..1590553 | + | 381 | WP_033910829.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GYN04_RS11810 | 1590570..1590698 | - | 129 | WP_017147221.1 | hypothetical protein | - |
| GYN04_RS08280 (GYN04_08040) | 1590882..1591843 | - | 962 | Protein_1626 | IS110 family transposase ISNgo2 | Transposase |
| GYN04_RS08285 (GYN04_08045) | 1592829..1593913 | - | 1085 | Protein_1627 | zonular occludens toxin domain-containing protein | - |
| GYN04_RS08290 (GYN04_08050) | 1593923..1594213 | - | 291 | WP_003700141.1 | DUF2523 domain-containing protein | - |
| GYN04_RS08295 (GYN04_08055) | 1594214..1595785 | - | 1572 | WP_250328374.1 | IgG-binding virulence factor TspB family protein | - |
| GYN04_RS08300 (GYN04_08060) | 1595727..1596044 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| GYN04_RS08305 (GYN04_08065) | 1596172..1596450 | - | 279 | WP_003689168.1 | hypothetical protein | - |
| GYN04_RS08310 (GYN04_08070) | 1596457..1596675 | - | 219 | WP_003691584.1 | major capsid protein | - |
| GYN04_RS08315 (GYN04_08075) | 1596761..1596964 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| GYN04_RS08320 (GYN04_08080) | 1596978..1597289 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| GYN04_RS08325 (GYN04_08085) | 1597303..1598589 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| GYN04_RS08330 (GYN04_08090) | 1598618..1598842 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| GYN04_RS08335 (GYN04_08095) | 1599238..1599444 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| GYN04_RS08340 (GYN04_08100) | 1599539..1600708 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| GYN04_RS08345 (GYN04_08105) | 1600854..1601624 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| GYN04_RS08350 (GYN04_08110) | 1601726..1601977 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| GYN04_RS08355 (GYN04_08115) | 1602029..1602835 | + | 807 | WP_003691772.1 | basic amino acid ABC transporter substrate-binding protein | - |
| GYN04_RS08360 | 1603142..1604664 | + | 1523 | Protein_1642 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|