MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 34276 bp
Accession: NZ_CP048250 Location: 1561843..1596118 Organism: Neisseria gonorrhoeae strain CT532 Replicon: chromosome
Accession: NZ_CP048250 Location: 1561843..1596118 Organism: Neisseria gonorrhoeae strain CT532 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYN05_RS07995 (GYN05_07795) | 1557299..1558717 | - | 1419 | WP_003689535.1 | type I glutamate--ammonia ligase | - |
| GYN05_RS08000 (GYN05_07805) | 1559028..1559837 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| GYN05_RS08005 (GYN05_07810) | 1559840..1560541 | + | 702 | WP_003689538.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| GYN05_RS08015 (GYN05_07820) | 1561081..1561815 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| GYN05_RS08020 (GYN05_07825) | 1561886..1562416 | - | 531 | WP_003689542.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| GYN05_RS08025 (GYN05_07830) | 1562397..1562978 | - | 582 | WP_003695504.1 | LPS export ABC transporter periplasmic protein LptC | - |
| GYN05_RS08030 (GYN05_07835) | 1562975..1563511 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| GYN05_RS08035 (GYN05_07840) | 1563577..1564551 | - | 975 | WP_003689550.1 | hypothetical protein | VF |
| GYN05_RS08040 (GYN05_07845) | 1564648..1565703 | + | 1056 | WP_003689551.1 | transaldolase | - |
| GYN05_RS11770 | 1565715..1565849 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| GYN05_RS08045 (GYN05_07850) | 1565854..1566144 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| GYN05_RS08050 (GYN05_07855) | 1566161..1567048 | + | 888 | WP_003689554.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| GYN05_RS08055 (GYN05_07860) | 1567118..1568134 | - | 1017 | WP_003689555.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| GYN05_RS08060 (GYN05_07865) | 1568254..1569408 | + | 1155 | WP_047919675.1 | hypothetical protein ; Integrase | Integrase |
| GYN05_RS08065 (GYN05_07870) | 1569458..1569724 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| GYN05_RS08070 (GYN05_07875) | 1569832..1570779 | - | 948 | WP_012503904.1 | hypothetical protein | - |
| GYN05_RS08075 (GYN05_07880) | 1570751..1570981 | - | 231 | WP_003695893.1 | hypothetical protein | - |
| GYN05_RS08080 (GYN05_07885) | 1570978..1571961 | - | 984 | WP_047919222.1 | hypothetical protein | - |
| GYN05_RS08085 (GYN05_07890) | 1572072..1572287 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| GYN05_RS08090 (GYN05_07895) | 1572339..1572830 | - | 492 | WP_218422917.1 | siphovirus Gp157 family protein | - |
| GYN05_RS08095 (GYN05_07900) | 1572827..1573009 | - | 183 | WP_003691535.1 | hypothetical protein | - |
| GYN05_RS08100 (GYN05_07905) | 1573149..1573835 | - | 687 | WP_003691532.1 | hypothetical protein | - |
| GYN05_RS08105 | 1573904..1574065 | - | 162 | WP_003691530.1 | hypothetical protein | - |
| GYN05_RS08110 (GYN05_07910) | 1574062..1574337 | - | 276 | WP_050154389.1 | hypothetical protein | - |
| GYN05_RS08115 (GYN05_07915) | 1574490..1574822 | - | 333 | WP_003705604.1 | hypothetical protein | - |
| GYN05_RS08120 (GYN05_07920) | 1574963..1575256 | - | 294 | WP_250328953.1 | hypothetical protein | - |
| GYN05_RS08125 (GYN05_07925) | 1575253..1575729 | - | 477 | WP_002255718.1 | hypothetical protein | - |
| GYN05_RS08130 (GYN05_07930) | 1575762..1575962 | - | 201 | WP_047920246.1 | hypothetical protein | - |
| GYN05_RS08135 (GYN05_07935) | 1576183..1576944 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| GYN05_RS08140 (GYN05_07940) | 1577043..1577444 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GYN05_RS08145 (GYN05_07945) | 1577546..1577728 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GYN05_RS08150 (GYN05_07950) | 1577898..1578716 | - | 819 | WP_012503752.1 | DUF3037 domain-containing protein | - |
| GYN05_RS08155 (GYN05_07955) | 1578713..1579411 | - | 699 | WP_003689139.1 | hypothetical protein | - |
| GYN05_RS08160 (GYN05_07960) | 1579650..1580348 | - | 699 | WP_050169364.1 | S24 family peptidase | - |
| GYN05_RS08165 (GYN05_07965) | 1580388..1581041 | - | 654 | WP_157149898.1 | helix-turn-helix transcriptional regulator | - |
| GYN05_RS08170 | 1581290..1581424 | + | 135 | WP_229684436.1 | YdaS family helix-turn-helix protein | - |
| GYN05_RS08175 (GYN05_07975) | 1581426..1581626 | + | 201 | WP_012503750.1 | hypothetical protein | - |
| GYN05_RS08180 (GYN05_07980) | 1581784..1582011 | + | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| GYN05_RS08185 (GYN05_07985) | 1582008..1583048 | + | 1041 | WP_250328954.1 | helix-turn-helix domain-containing protein | - |
| GYN05_RS08190 (GYN05_07990) | 1583064..1583846 | + | 783 | WP_025456432.1 | IS21 family transposase ISGur15 | Transposase |
| GYN05_RS08195 (GYN05_07995) | 1583916..1584122 | + | 207 | WP_154235857.1 | hypothetical protein | - |
| GYN05_RS08200 (GYN05_08000) | 1584161..1584655 | + | 495 | WP_041421248.1 | DUF3310 domain-containing protein | - |
| GYN05_RS08205 | 1585019..1585168 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| GYN05_RS08210 | 1585197..1585478 | + | 282 | WP_003689109.1 | hypothetical protein | - |
| GYN05_RS08215 (GYN05_08005) | 1585469..1585849 | + | 381 | WP_017147222.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GYN05_RS11775 | 1585866..1585994 | - | 129 | WP_012503747.1 | hypothetical protein | - |
| GYN05_RS08220 (GYN05_08010) | 1586178..1587140 | - | 963 | WP_048596800.1 | IS110 family transposase ISNgo2 | Transposase |
| GYN05_RS08225 (GYN05_08015) | 1587652..1588011 | - | 360 | WP_003689732.1 | hypothetical protein | - |
| GYN05_RS08230 (GYN05_08020) | 1588132..1589204 | - | 1073 | Protein_1617 | zonular occludens toxin domain-containing protein | - |
| GYN05_RS08235 (GYN05_08025) | 1589214..1589504 | - | 291 | WP_047917922.1 | DUF2523 domain-containing protein | - |
| GYN05_RS08240 (GYN05_08030) | 1589483..1591072 | - | 1590 | WP_012503913.1 | IgG-binding virulence factor TspB family protein | - |
| GYN05_RS08245 (GYN05_08035) | 1591014..1591331 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| GYN05_RS08250 (GYN05_08040) | 1591459..1591737 | - | 279 | WP_003689168.1 | hypothetical protein | - |
| GYN05_RS08255 (GYN05_08045) | 1591744..1591963 | - | 220 | Protein_1622 | major capsid protein | - |
| GYN05_RS08260 (GYN05_08050) | 1592049..1592252 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| GYN05_RS08265 (GYN05_08055) | 1592266..1592577 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| GYN05_RS08270 (GYN05_08060) | 1592591..1593877 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| GYN05_RS08275 (GYN05_08065) | 1593906..1594130 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| GYN05_RS08280 (GYN05_08070) | 1594526..1594732 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| GYN05_RS08285 (GYN05_08075) | 1594827..1595996 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| GYN05_RS08290 (GYN05_08080) | 1596142..1596912 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| GYN05_RS08295 (GYN05_08085) | 1597014..1597265 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| GYN05_RS08300 (GYN05_08090) | 1597317..1598123 | + | 807 | WP_003691772.1 | basic amino acid ABC transporter substrate-binding protein | - |
| GYN05_RS08305 (GYN05_08095) | 1598430..1599953 | + | 1524 | Protein_1632 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|