MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33519 bp
Accession: NZ_CP048246 Location: 1566754..1600272 Organism: Neisseria gonorrhoeae strain CT602 Replicon: chromosome
Accession: NZ_CP048246 Location: 1566754..1600272 Organism: Neisseria gonorrhoeae strain CT602 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYN06_RS08025 (GYN06_07820) | 1562210..1563628 | - | 1419 | WP_047924463.1 | type I glutamate--ammonia ligase | - |
| GYN06_RS08030 (GYN06_07830) | 1563939..1564748 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| GYN06_RS08035 (GYN06_07835) | 1564751..1565452 | + | 702 | WP_003689538.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| GYN06_RS08045 (GYN06_07845) | 1565992..1566726 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| GYN06_RS08050 (GYN06_07850) | 1566797..1567327 | - | 531 | WP_003689542.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| GYN06_RS08055 (GYN06_07855) | 1567308..1567889 | - | 582 | WP_003689544.1 | LPS export ABC transporter periplasmic protein LptC | - |
| GYN06_RS08060 (GYN06_07860) | 1567886..1568422 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| GYN06_RS08065 (GYN06_07865) | 1568488..1569462 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| GYN06_RS08070 (GYN06_07870) | 1569559..1570614 | + | 1056 | WP_003689551.1 | transaldolase | - |
| GYN06_RS11715 | 1570626..1570760 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| GYN06_RS08075 (GYN06_07875) | 1570765..1571055 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| GYN06_RS08080 (GYN06_07880) | 1571072..1571959 | + | 888 | WP_003689554.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| GYN06_RS08085 (GYN06_07885) | 1572029..1573045 | - | 1017 | WP_003689555.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| GYN06_RS08090 (GYN06_07890) | 1573165..1574319 | + | 1155 | WP_047919675.1 | hypothetical protein ; Integrase | Integrase |
| GYN06_RS08095 (GYN06_07895) | 1574369..1574635 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| GYN06_RS08100 (GYN06_07900) | 1574743..1575891 | - | 1149 | WP_010951305.1 | hypothetical protein | - |
| GYN06_RS08105 (GYN06_07905) | 1575888..1576871 | - | 984 | WP_047919745.1 | hypothetical protein | - |
| GYN06_RS08110 (GYN06_07910) | 1576982..1577197 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| GYN06_RS08115 (GYN06_07915) | 1577249..1577740 | - | 492 | WP_003691537.1 | siphovirus Gp157 family protein | - |
| GYN06_RS08120 (GYN06_07920) | 1577737..1577919 | - | 183 | WP_003691535.1 | hypothetical protein | - |
| GYN06_RS08125 (GYN06_07925) | 1578059..1578745 | - | 687 | WP_003691532.1 | hypothetical protein | - |
| GYN06_RS08130 | 1578814..1578975 | - | 162 | WP_003691530.1 | hypothetical protein | - |
| GYN06_RS08135 (GYN06_07930) | 1578972..1579247 | - | 276 | WP_003703838.1 | hypothetical protein | - |
| GYN06_RS08140 (GYN06_07935) | 1579400..1579732 | - | 333 | WP_003696914.1 | hypothetical protein | - |
| GYN06_RS08145 (GYN06_07940) | 1579873..1580160 | - | 288 | WP_123768272.1 | hypothetical protein | - |
| GYN06_RS08150 (GYN06_07945) | 1580157..1580633 | - | 477 | WP_002255718.1 | hypothetical protein | - |
| GYN06_RS08155 (GYN06_07950) | 1580666..1580866 | - | 201 | WP_003704298.1 | hypothetical protein | - |
| GYN06_RS08160 (GYN06_07955) | 1581077..1581838 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| GYN06_RS08165 (GYN06_07960) | 1581937..1582338 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GYN06_RS08170 (GYN06_07965) | 1582440..1582622 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GYN06_RS08175 (GYN06_07970) | 1582792..1583610 | - | 819 | WP_012503752.1 | DUF3037 domain-containing protein | - |
| GYN06_RS08180 (GYN06_07975) | 1583607..1584305 | - | 699 | WP_003689139.1 | hypothetical protein | - |
| GYN06_RS08185 (GYN06_07980) | 1584544..1585254 | - | 711 | WP_050161643.1 | helix-turn-helix transcriptional regulator | - |
| GYN06_RS08190 (GYN06_07985) | 1585370..1585558 | + | 189 | WP_003689136.1 | helix-turn-helix domain-containing protein | - |
| GYN06_RS08195 | 1585638..1585793 | + | 156 | WP_003691446.1 | hypothetical protein | - |
| GYN06_RS08200 (GYN06_07990) | 1585770..1585958 | - | 189 | WP_003706568.1 | hypothetical protein | - |
| GYN06_RS08205 (GYN06_07995) | 1586131..1586358 | + | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| GYN06_RS08210 (GYN06_08000) | 1586355..1587380 | + | 1026 | WP_250328371.1 | helix-turn-helix domain-containing protein | - |
| GYN06_RS08215 (GYN06_08005) | 1587395..1588177 | + | 783 | WP_050163162.1 | IS21 family transposase ISGur15 | Transposase |
| GYN06_RS08220 (GYN06_08010) | 1588247..1588453 | + | 207 | WP_184982621.1 | hypothetical protein | - |
| GYN06_RS08225 (GYN06_08015) | 1588492..1588986 | + | 495 | WP_047923242.1 | DUF3310 domain-containing protein | - |
| GYN06_RS08230 | 1589163..1589312 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| GYN06_RS08235 | 1589352..1589621 | + | 270 | WP_221179764.1 | hypothetical protein | - |
| GYN06_RS08240 (GYN06_08020) | 1589612..1589992 | + | 381 | WP_082295559.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GYN06_RS11720 | 1590009..1590137 | - | 129 | WP_017147221.1 | hypothetical protein | - |
| GYN06_RS08245 (GYN06_08025) | 1590321..1591283 | - | 963 | WP_250333184.1 | IS110 family transposase ISNgo2 | Transposase |
| GYN06_RS08250 (GYN06_08030) | 1591794..1592153 | - | 360 | WP_003691563.1 | hypothetical protein | - |
| GYN06_RS08255 (GYN06_08035) | 1592274..1593359 | - | 1086 | WP_020997395.1 | zonular occludens toxin domain-containing protein | - |
| GYN06_RS08260 (GYN06_08040) | 1593369..1593659 | - | 291 | WP_003700141.1 | DUF2523 domain-containing protein | - |
| GYN06_RS08265 (GYN06_08045) | 1593638..1595185 | - | 1548 | WP_250333176.1 | IgG-binding virulence factor TspB family protein | - |
| GYN06_RS08270 (GYN06_08050) | 1595169..1595486 | - | 318 | WP_025456430.1 | DUF1132 family protein | - |
| GYN06_RS08275 (GYN06_08055) | 1595614..1595892 | - | 279 | WP_003689168.1 | hypothetical protein | - |
| GYN06_RS08280 (GYN06_08060) | 1595899..1596117 | - | 219 | WP_003691584.1 | major capsid protein | - |
| GYN06_RS08285 (GYN06_08065) | 1596203..1596406 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| GYN06_RS08290 (GYN06_08070) | 1596420..1596731 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| GYN06_RS08295 (GYN06_08075) | 1596745..1598031 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| GYN06_RS08300 (GYN06_08080) | 1598060..1598284 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| GYN06_RS08305 (GYN06_08085) | 1598680..1598886 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| GYN06_RS08310 (GYN06_08090) | 1598981..1600150 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| GYN06_RS08315 (GYN06_08095) | 1600296..1601066 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| GYN06_RS08320 (GYN06_08100) | 1601168..1601419 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| GYN06_RS08325 (GYN06_08105) | 1601471..1602277 | + | 807 | WP_003689749.1 | basic amino acid ABC transporter substrate-binding protein | - |
| GYN06_RS08330 (GYN06_08110) | 1602584..1604107 | + | 1524 | Protein_1639 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|