MGE detailed information
MGE type: Prophage MGE length: 68037 bp
Accession: NZ_CP048107 Location: 2579987..2648023 Organism: Escherichia coli strain 201609 Replicon: chromosome
Accession: NZ_CP048107 Location: 2579987..2648023 Organism: Escherichia coli strain 201609 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWK05_RS12430 () | 2575886..2577106 | + | 1221 | WP_000225257.1 | DNA-binding transcriptional repressor Mlc | - |
| GWK05_RS12435 () | 2577231..2577926 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| GWK05_RS12440 () | 2577879..2579171 | - | 1293 | WP_071586384.1 | voltage-gated ClC-type chloride channel ClcB | - |
| GWK05_RS12445 () | 2579330..2579944 | - | 615 | WP_021516105.1 | Tat proofreading chaperone DmsD | - |
| GWK05_RS12450 () | 2579987..2580841 | - | 855 | WP_000526500.1 | dimethyl sulfoxide reductase anchor subunit | - |
| GWK05_RS12455 () | 2580843..2581460 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| GWK05_RS12460 () | 2581471..2583894 | - | 2424 | WP_072146081.1 | dimethyl sulfoxide reductase subunit A | - |
| GWK05_RS12465 () | 2583955..2586381 | - | 2427 | WP_022645727.1 | dimethyl sulfoxide reductase subunit A | - |
| GWK05_RS12470 () | 2586580..2586885 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| GWK05_RS12475 () | 2586993..2587703 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| GWK05_RS12480 () | 2587706..2588266 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| GWK05_RS12485 () | 2588301..2588642 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| GWK05_RS12490 () | 2588777..2589103 | + | 327 | WP_162107902.1 | YnfA family protein | - |
| GWK05_RS12495 () | 2589309..2590523 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| GWK05_RS12500 () | 2590535..2591554 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| GWK05_RS12505 () | 2591612..2591740 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| GWK05_RS12510 () | 2591742..2593022 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| GWK05_RS12515 () | 2593057..2593308 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| GWK05_RS12520 () | 2593381..2595852 | - | 2472 | WP_096940150.1 | exonuclease | - |
| GWK05_RS12525 () | 2595946..2596137 | - | 192 | WP_077737572.1 | lysis protein YdfD | - |
| GWK05_RS12530 () | 2596134..2596322 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| GWK05_RS12535 () | 2596833..2597033 | + | 201 | WP_000159335.1 | hypothetical protein | - |
| GWK05_RS12540 () | 2597002..2597379 | - | 378 | WP_001241299.1 | hypothetical protein | - |
| GWK05_RS12545 () | 2597379..2597531 | - | 153 | WP_000379591.1 | DUF1391 family protein | - |
| GWK05_RS12550 () | 2597700..2598107 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| GWK05_RS12555 () | 2598188..2598415 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| GWK05_RS12560 () | 2598399..2598920 | + | 522 | WP_000705360.1 | hypothetical protein | - |
| GWK05_RS12565 () | 2598901..2599878 | + | 978 | WP_123056620.1 | hypothetical protein | - |
| GWK05_RS12570 () | 2599919..2600320 | + | 402 | WP_001151189.1 | DUF977 family protein | - |
| GWK05_RS12580 () | 2602028..2603482 | + | 1455 | WP_032341362.1 | hypothetical protein | - |
| - () | 2604662..2604720 | - | 59 | - | - | Antitoxin Detail |
| GWK05_RS12585 () | 2604732..2604887 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| GWK05_RS12590 () | 2605104..2605355 | + | 252 | WP_000980999.1 | hypothetical protein | - |
| GWK05_RS12595 () | 2605422..2605700 | + | 279 | WP_032140164.1 | hypothetical protein | - |
| GWK05_RS12600 () | 2605702..2606751 | + | 1050 | WP_096940148.1 | DUF968 domain-containing protein | - |
| GWK05_RS12605 () | 2606764..2607120 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GWK05_RS12610 () | 2607135..2607956 | + | 822 | WP_096940147.1 | antitermination protein | - |
| GWK05_RS12625 () | 2608897..2608983 | + | 87 | WP_000114359.1 | DUF3927 family protein | - |
| GWK05_RS12630 () | 2609350..2609778 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| GWK05_RS12635 () | 2609950..2610324 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| GWK05_RS12640 () | 2610576..2610791 | + | 216 | WP_000839562.1 | phage lysis protein EssD | - |
| GWK05_RS12645 () | 2610796..2611107 | + | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| GWK05_RS12650 () | 2611104..2611637 | + | 534 | WP_162107903.1 | lysozyme | - |
| GWK05_RS12655 () | 2611634..2612131 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| GWK05_RS12660 () | 2612495..2612707 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GWK05_RS12665 () | 2612718..2612906 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| GWK05_RS12670 () | 2613191..2614415 | + | 1225 | Protein_2472 | IS3 family transposase IS2 | Transposase |
| GWK05_RS12675 () | 2614428..2614541 | + | 114 | WP_059328823.1 | hypothetical protein | - |
| GWK05_RS12680 () | 2614714..2614887 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| GWK05_RS12685 () | 2615183..2615389 | + | 207 | WP_000548593.1 | hypothetical protein | - |
| GWK05_RS12690 () | 2615942..2616436 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| GWK05_RS12695 () | 2616436..2618538 | + | 2103 | WP_000934104.1 | phage terminase large subunit family protein | - |
| GWK05_RS12700 () | 2618535..2618747 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| GWK05_RS12705 () | 2618675..2620255 | + | 1581 | WP_072128716.1 | phage portal protein | - |
| GWK05_RS12710 () | 2620200..2622230 | + | 2031 | WP_001583540.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GWK05_RS12715 () | 2622317..2622640 | + | 324 | WP_001097053.1 | DUF2190 family protein | - |
| GWK05_RS12720 () | 2622633..2622908 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| GWK05_RS12725 () | 2622920..2623498 | + | 579 | WP_000677091.1 | phage tail protein | - |
| GWK05_RS12730 () | 2623495..2623896 | + | 402 | WP_001079408.1 | phage minor tail U family protein | - |
| GWK05_RS12735 () | 2623907..2624650 | + | 744 | WP_000211105.1 | phage tail protein | - |
| GWK05_RS12740 () | 2624711..2625097 | + | 387 | WP_096940152.1 | phage minor tail protein G | - |
| GWK05_RS12745 () | 2625106..2625435 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| GWK05_RS12750 () | 2625407..2628472 | + | 3066 | WP_001583539.1 | phage tail tape measure protein | - |
| GWK05_RS12755 () | 2628472..2628801 | + | 330 | WP_000447253.1 | phage tail protein | - |
| GWK05_RS12760 () | 2628811..2629509 | + | 699 | WP_001537716.1 | phage minor tail protein L | - |
| GWK05_RS12765 () | 2629515..2630258 | + | 744 | WP_032147298.1 | C40 family peptidase | - |
| GWK05_RS12770 () | 2630156..2630803 | + | 648 | WP_001399694.1 | tail assembly protein | - |
| GWK05_RS12775 () | 2630863..2634276 | + | 3414 | WP_162107904.1 | host specificity protein J | - |
| GWK05_RS12780 () | 2634345..2634944 | + | 600 | WP_112918210.1 | Outer membrane protein X | VF |
| GWK05_RS12785 () | 2635009..2637714 | + | 2706 | WP_162107905.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GWK05_RS12790 () | 2637714..2638289 | + | 576 | WP_096940120.1 | tail fiber assembly protein | - |
| GWK05_RS12795 () | 2638387..2638977 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GWK05_RS12800 () | 2639294..2639527 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| GWK05_RS12805 () | 2639596..2639709 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| GWK05_RS12810 () | 2640313..2641596 | + | 1284 | Protein_2500 | MHS family MFS transporter YdfJ | - |
| GWK05_RS12815 () | 2641686..2643146 | + | 1461 | WP_000527788.1 | mannitol dehydrogenase family protein | - |
| GWK05_RS12820 () | 2643182..2643385 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GWK05_RS12825 () | 2643562..2644248 | - | 687 | WP_162107906.1 | DNA-binding transcriptional regulator YdfH | - |
| GWK05_RS12830 () | 2644337..2645083 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| GWK05_RS12835 () | 2645220..2647265 | + | 2046 | WP_022645714.1 | peptidyl-dipeptidase Dcp | - |
| GWK05_RS12840 () | 2647631..2648023 | + | 393 | WP_022645713.1 | YdeI family stress tolerance OB fold protein | - |
| GWK05_RS12845 () | 2648278..2649168 | + | 891 | WP_000592819.1 | diguanylate cyclase DgcZ | - |
| GWK05_RS12850 () | 2649387..2649482 | - | 96 | WP_000901367.1 | protein MgtS | - |
| GWK05_RS12855 () | 2649609..2650796 | - | 1188 | WP_022645712.1 | efflux MFS transporter YdeE | - |
| GWK05_RS12860 () | 2650991..2651890 | + | 900 | WP_000087204.1 | O-acetylserine/cysteine exporter | - |
| GWK05_RS12865 () | 2651921..2652139 | - | 219 | WP_000803527.1 | multiple antibiotic resistance protein MarB | - |
| GWK05_RS12870 () | 2652171..2652554 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| GWK05_RS12875 () | 2652575..2653009 | - | 435 | WP_022645711.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|