MGE detailed information
MGE type: Mobilizable plasmid MGE length: 93625 bp
Accession: NZ_CP048012 Location: 1..93625 Organism: Escherichia coli strain RUT3575 Replicon: plasmid p3575-NDM-5
Accession: NZ_CP048012 Location: 1..93625 Organism: Escherichia coli strain RUT3575 Replicon: plasmid p3575-NDM-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GW576_RS23525 () | 1..858 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| GW576_RS23530 () | 1774..2766 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| GW576_RS23535 () | 2825..3442 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| GW576_RS23540 () | 3637..5193 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| GW576_RS23545 () | 5458..6048 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| GW576_RS23550 () | 6215..9127 | - | 2913 | WP_203045670.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GW576_RS23555 () | 9152..9856 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23560 () | 9901..10206 | + | 306 | Protein_8 | ISAs1 family transposase | - |
| GW576_RS23565 () | 10299..11729 | - | 1431 | WP_114508847.1 | Phosphoglucosamine mutase | VF |
| GW576_RS23570 () | 11726..12472 | - | 747 | WP_001222852.1 | PGL/p-HBAD biosynthesis glycosyltransferase | VF |
| GW576_RS23575 () | 12472..13887 | - | 1416 | WP_087893959.1 | Mannose-1-phosphate guanylyltransferase 1 | VF |
| GW576_RS23580 () | 13893..14354 | - | 462 | WP_001042469.1 | GDP-mannose mannosyl hydrolase | VF |
| GW576_RS23585 () | 14357..15322 | - | 966 | WP_000039130.1 | GDP-L-fucose synthase | VF |
| GW576_RS23590 () | 15325..16443 | - | 1119 | WP_000861364.1 | GDP-mannose 4,6-dehydratase | VF |
| GW576_RS23595 () | 16445..17518 | - | 1074 | WP_000955038.1 | glycosyltransferase family 4 protein | - |
| GW576_RS23600 () | 17548..18624 | - | 1077 | WP_000499529.1 | EpsG family protein | - |
| GW576_RS23605 () | 18636..19625 | - | 990 | WP_000433864.1 | Stealth CR1 domain-containing protein | - |
| GW576_RS23610 () | 19628..20371 | - | 744 | WP_000472882.1 | PGL/p-HBAD biosynthesis glycosyltransferase | VF |
| GW576_RS23615 () | 20364..21623 | - | 1260 | WP_024258976.1 | flippase | - |
| GW576_RS23620 () | 21950..22321 | - | 372 | Protein_20 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| GW576_RS23625 () | 22371..23075 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23630 () | 23139..24110 | - | 972 | Protein_22 | group II intron reverse transcriptase/maturase | - |
| GW576_RS23635 () | 24516..24947 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GW576_RS23640 () | 24947..26218 | + | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| GW576_RS23645 () | 26300..27274 | - | 975 | WP_000064120.1 | ParB/RepB/Spo0J family partition protein | - |
| GW576_RS23650 () | 27274..28479 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| GW576_RS23655 () | 28894..29163 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| GW576_RS23660 () | 29520..30386 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| GW576_RS23665 () | 30921..31025 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| GW576_RS23670 () | 31154..31411 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| GW576_RS23675 () | 31469..32245 | - | 777 | WP_049245386.1 | site-specific integrase | - |
| GW576_RS23680 () | 32424..32930 | - | 507 | WP_023294776.1 | hypothetical protein | - |
| GW576_RS23685 () | 33088..33393 | - | 306 | WP_016946795.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GW576_RS23690 () | 33395..33613 | - | 219 | WP_023294775.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GW576_RS23695 () | 34207..35181 | - | 975 | WP_001148755.1 | sensor domain-containing diguanylate cyclase | - |
| GW576_RS23700 () | 35818..36726 | + | 909 | WP_001372261.1 | HNH endonuclease | - |
| GW576_RS23705 () | 37066..37338 | - | 273 | Protein_37 | IS1 family transposase | - |
| GW576_RS23710 () | 37467..38870 | + | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| GW576_RS23715 () | 38904..40118 | - | 1215 | WP_005012528.1 | type II site-specific deoxyribonuclease | - |
| GW576_RS23720 () | 40358..40495 | + | 138 | Protein_40 | recombinase family protein | - |
| GW576_RS23725 () | 40556..41260 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23730 () | 41294..41452 | - | 159 | WP_203045673.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GW576_RS23735 () | 41616..42173 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GW576_RS23740 () | 42356..43216 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GW576_RS23745 () | 43386..44141 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| GW576_RS23750 () | 44222..44770 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| GW576_RS23755 () | 44833..45183 | + | 351 | Protein_47 | 60 kDa chaperonin | VF |
| GW576_RS23760 () | 45377..46081 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23765 () | 46246..46539 | + | 294 | Protein_49 | IS30 family transposase ISAba125 | Transposase |
| GW576_RS23770 () | 46640..47452 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| GW576_RS23775 () | 47456..47821 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| GW576_RS23780 () | 47826..48464 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| GW576_RS23785 () | 48475..49506 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| GW576_RS23790 () | 49819..51360 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| GW576_RS23795 () | 51765..52604 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GW576_RS23800 () | 52598..52945 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GW576_RS23805 () | 53109..53900 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GW576_RS23810 () | 53906..54196 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| GW576_RS23815 () | 54308..54805 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| GW576_RS23820 () | 54950..55816 | + | 867 | Protein_60 | IS91 family transposase ISAzo26 | Transposase |
| GW576_RS23825 () | 55871..56575 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23830 () | 56641..58155 | + | 1515 | Protein_62 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GW576_RS23835 () | 58224..59108 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| GW576_RS23840 () | 59104..59273 | + | 170 | Protein_64 | resolvase | - |
| GW576_RS23845 () | 59280..59447 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| GW576_RS23850 () | 59619..62294 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| GW576_RS23855 () | 62597..63598 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| GW576_RS23860 () | 63823..64285 | - | 463 | Protein_68 | hypothetical protein | - |
| GW576_RS23865 () | 64394..64744 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| GW576_RS23870 () | 64747..65709 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| GW576_RS23875 () | 65841..66149 | + | 309 | WP_039021875.1 | hypothetical protein | - |
| GW576_RS23880 () | 66226..66909 | + | 684 | WP_000085889.1 | DNA methylase | - |
| GW576_RS23885 () | 66910..67131 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| GW576_RS23890 () | 67144..67578 | + | 435 | WP_000274504.1 | DUF1380 family protein | - |
| GW576_RS23895 () | 67623..68393 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| GW576_RS23900 () | 68876..69178 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| GW576_RS23905 () | 69225..69647 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| GW576_RS23910 () | 69644..69835 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| GW576_RS23915 () | 70149..71816 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| GW576_RS23920 () | 73019..73306 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| GW576_RS23925 () | 73424..74245 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| GW576_RS23930 () | 74542..75189 | - | 648 | WP_031943493.1 | hypothetical protein | VF |
| GW576_RS23935 () | 75466..75849 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| GW576_RS23940 () | 76040..76726 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| GW576_RS23945 () | 76820..77047 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| GW576_RS23950 () | 77081..77440 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| GW576_RS23955 () | 77455..77766 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GW576_RS23960 () | 77788..78354 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| GW576_RS23965 () | 78365..79069 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| GW576_RS23970 () | 79069..79536 | + | 468 | Protein_90 | conjugal transfer protein TrbI | - |
| GW576_RS23975 () | 79637..81403 | + | 1767 | WP_203045658.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GW576_RS23980 () | 81430..81687 | + | 258 | WP_000864352.1 | conjugal transfer protein TrbE | - |
| GW576_RS23985 () | 81680..82423 | + | 744 | WP_001430248.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GW576_RS23990 () | 82439..82786 | + | 348 | WP_001287891.1 | conjugal transfer protein TrbA | - |
| GW576_RS23995 () | 82905..83189 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GW576_RS24000 () | 83176..83721 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GW576_RS24005 () | 83651..84013 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| GW576_RS24010 () | 84010..85299 | + | 1290 | WP_203045667.1 | conjugal transfer protein TraH | - |
| GW576_RS24015 () | 85296..85805 | + | 510 | WP_031943494.1 | conjugal transfer entry exclusion protein TraS | - |
| GW576_RS24020 () | 85819..86550 | + | 732 | WP_094658456.1 | complement resistance protein TraT | - |
| GW576_RS24025 () | 86803..88260 | + | 1458 | Protein_101 | type IV conjugative transfer system coupling protein TraD | - |
| GW576_RS24030 () | 88254..88451 | + | 198 | Protein_102 | conjugal transfer protein | - |
| GW576_RS24035 () | 88506..89066 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| GW576_RS24040 () | 89696..90373 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| GW576_RS24045 () | 91027..91239 | + | 213 | Protein_105 | ANR family transcriptional regulator | - |
| GW576_RS24050 () | 91483..91944 | + | 462 | WP_015059120.1 | thermonuclease family protein | - |
| GW576_RS24055 () | 91990..92199 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| GW576_RS24060 () | 92237..92827 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| GW576_RS24065 () | 93067..93321 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|